SFRP1基因启动子区甲基化与宫颈癌及癌前病变的相关性研究

应用MassARRAY DNA甲基化定量分析方法检测58例宫颈癌组织、57例CIN2/3组织、36例CIN1组织及28例正常对照组织中SFRP1基因启动子区各CpG位点甲基化,探讨SFRP1基因启动子区甲基化与宫颈癌演进及与HPV16感染的相关性。结果显示:2110个CpG单位中甲基化率低于30%的CpG单位1612个,占总数的76.4%;甲基化率大于80%的CpG单位为4.4%,多分布于CIN2/3和宫颈癌组织之中。其中SFRP1基因启动子区CpG12.13和CpG18位点的甲基化率宫颈癌组高于对照、CIN1和CIN2/3组,差异具有统计学意义(P0.05)。CpG12.13和CpG18位点甲基化率与HPV16感染无相关性(P0.05)。提示SFRP1基因在CpG12.13和CpG18位点上高甲基化可能与宫颈癌的演进相关。     

新疆维吾尔族妇女宫颈癌NKX6-1基因甲基化检测

为探讨NKX6-1基因启动子甲基化与HPV16感染在新疆维吾尔族妇女宫颈癌发生中的作用。收集43例新疆维吾尔族妇女正常宫颈组织、30例宫颈上皮内瘤样病变(CIN)和48例宫颈癌组织。采用PCR方法检测HPV16感染;甲基化特异性PCR方法检测NKX6-1基因启动子区甲基化状况,并分析启动子甲基化与HPV16感染与宫颈癌的相关性。结果显示,正常宫颈组,CIN和宫颈癌组中的NKX6-1基因甲基化率分别为11.63%、46.67%和77.08%,差异有统计学意义(P0.01);HPV16的感染率分别为13.95%,36.67%和66.66%,三组差异均有统计学意义(P0.01)。NKX6-1甲基化与HPV16感染无显著相关性(P0.05)。由此可知,NKX6-1基因启动子甲基化与HPV16感染无相关性,但与维吾尔族宫颈癌发生相关。     

宫颈上皮内肿瘤及宫颈鳞状细胞癌组织中HPV16感染与hTERT,P21wafl和Ki67表达关系的分析

为了探讨宫颈鳞状细胞癌(SCC)及宫颈上皮内肿瘤(CIN)组织中人乳头瘤病毒(HPV)16感染及端粒酶反转录蛋白(hTERT)、抑癌基因P21wafl和增生抗原Ki67表达的关系及其意义,在130例正常宫颈组织及宫颈上皮内瘤样病变和宫颈鳞状细胞癌组织中,利用组织芯片技术,结合原位杂交技术,检测HPV16感染及结合免疫组织化学技术检测hTERT,Ki67,P21wafl的表达.结果表明:1)CINⅡ级、CINⅢ级、原位癌、浸润性鳞癌组织HPV16杂交信号阳性率显著高于正常宫颈组织(P均＜0.05),浸润性鳞癌HPV16阳性率也显著高于CIN(χ2=5.670,P=0.017).2)hTERT在CINⅡ级、CINⅢ级、原位癌、浸润性鳞癌组织中的表达都显著高于正常宫颈组织(P均＜0.05),浸涧性鳞癌hTERT表达率也显著高于原位癌及CIN(χ2=18.870,P=0.000;χ2=66.390,P=0.000).CIN三级之间相比差异也具显著统计学意义(χ2=30.468,P=0.000).3)P21wafl在浸润性鳞癌组织中的阳性率显著低于正常宫颈组织(P＜0.05),但与CIN相比差异无显著统计学意义(P＞0.05).CIN三级之间P21wafl表达差异也无显著统计学意义(P＞0.05).4)随着宫颈病变组织学严重程度的增加,Ki67表达逐渐增加(P＜0.05).5)HPV16感染率与hTERT表达之间呈正相关(P＜0.05,r=0.339),与P21wafl表达之间呈负相关(P＜0.05,r=-0.337),与Ki67表达无相关性(P＞0.05):hTERT与P21wafl之间呈负相关(P＜0.05,r=-0.248),与Ki67表达呈正相关(P＜0.05,r=0.398);P21wafl与Ki67表达呈负相关(P＜0.05,r=-0.446).可见:在宫颈上皮内肿瘤及宫颈鳞状细胞癌组织中,hTERT,P21wafl,Ki67表达改变可能与HPV16感染有关,且几者之间互相作用,共同影响CIN的发展及宫颈鳞癌的发生.这些指标综合分析可能为阐明HPV16的恶性转化机制以及为提高宫颈鳞癌及其癌前病变诊断率提供参考依据.组织芯片技术是高效的研究基因及其表达产物的技术平台.     

p16和HPV基因分型对宫颈上皮内瘤变的诊断价值研究

采用基因芯片技术及免疫组化法,对62例CIN组织(30例CINⅠ、17例CINⅡ、15例CINⅢ)进行HPV基因分型及p16基因表达检测.提示p16基因和HPV基因在宫颈CIN组织中的阳性表达率与对照组相比均有显著差异(P<0.01);p16在正常宫颈中无表达,而随着宫颈病变的进展,p16的表达率显著升高(P<0.01),且与HPV有相关性.表明p16在一定程度上可反映HPV的感染程度,可作为宫颈病变及宫颈癌筛查敏感的客观性指标;HPV联合p16基因检测能显著提高宫颈病变的准确性.     

人乳头瘤病毒基因分型在宫颈鳞癌及癌前病变的分布规律及临床意义

为探讨人乳头瘤病毒(human papilloma virus,HPV)基因分型在宫颈鳞癌及癌前病变中的分布规律及其与宫颈鳞癌发生发展的关系,应用PCR-反向点杂交技术对109例宫颈病变患者(宫颈鳞癌40例、CIN69例)进行HPV感染基因分型测定.结果显示,109例标本中HPV阳性检出率为100%,最常见HPV基因型为HPV16型;随着病变程度增加HPV单一感染比例逐渐升高,多重感染比例逐渐下降,单一感染以高危型HPV16型感染为主;HPV16型在CINⅠ、CINⅡ、CINⅢ、SCC中阳性率分别为30.77%(8/26)、59.09%(13/22)、90.48%(19/21)、90%(36/40),阳性率呈依次上升趋势.宫颈鳞癌及癌前病变与HPV感染直接相关,宫颈癌癌前病变是高、低危HPV共同作用的结果;高危型HPV持续感染是高级别子宫病变及癌变发生的必要条件;HPV16型病毒感染是国人子宫颈鳞癌形成的主要原因.     

人原发性肝癌中p16,p15基因CpG岛甲基化研究

目的　检测人原发性肝癌中 p16和 p15基因 5’启动子区CpG岛的异常甲基化 ,并分析其与人原发性肝癌发生发展的关系 ,探索其在临床早期基因诊断和治疗中的意义 .方法　用敏感的甲基化特异性PCR检测 2 0例人原发性肝癌患者癌组织、癌旁组织和远癌正常组织中p16 ,p15基因5’CpG岛的甲基化状况 ,统计分析这两个基因 5’CpG岛甲基化与肝癌病理特征的相关性 .结果　2 0例原发性肝癌肝癌组织中 p16和 p15基因 5’CpG岛分别有 6 5 %(13/2 0 )和 5 0 %(10 /2 0 )异常甲基化 ;癌旁组织中 p16和 p15基因 5’CpG岛分别有 6 0 %(12例 )和 4 0 %(8例 )异常甲基化 ;远癌正常组织中p16和 p15基因 5’CpG岛分别有 35 %(7例 )和 2 5 %(5例 )异常甲基化 .p16 ,p15基因 5’CpG岛甲基化在癌组织和癌组织旁、癌组织和远癌组织中均有相关性 .两个基因 5’CpG岛异常甲基化与临床病理特征无显著相关性 .结论　p16和 p15基因 5’CpG岛异常甲基化在人原发性肝癌中频率很高 ,可能在肝癌发生发展中扮演了重要角色 ;而...     

维、汉族妇女宫颈病变进程与雌激素受体1（ESR1）蛋白表达缺失的关系

 以往的报道显示宫颈癌组织内的雌激素受体1（Estrogen Receptor 1,ESR1）基因启动子发生高度甲基化,并提示其基因表达水平可能下降或基因休眠。本研究从蛋白质水平观察ESR1表达缺失与宫颈病变进程的关系及其维、汉妇女族群差异。收集维吾尔族和汉族妇女宫颈炎、宫颈内上皮瘤样病变（Cervical Intraepithelial Neoplasia,CIN）I/II/III和宫颈鳞癌患者的福尔马林浸泡与石蜡包埋宫颈组织标本共180例,采用免疫组织化学方法鉴定ESR1蛋白表达水平。结果显示,ESR1蛋白在宫颈上皮和间质细胞均有表达,但是随着CIN和宫颈鳞癌的发病进程,其在上皮细胞内的表达逐渐发生缺失;ESR1蛋白表达缺失率在宫颈炎和CIN I组较低（22%）,CIN II/III组明显升高（64%）,宫颈鳞癌达到最高（76%）,各组之间差异显著（P＜0.01）,但是在个体年龄之间无统计学差异（P＞0.05）。维、汉妇女族群ESR1表达缺失率的变化趋势有共性,其族群差异也无统计学意义（P＞0.05）。由此表明,ESR1表达缺失可能是宫颈鳞癌的早期预警指标,这为揭示该基因高度甲基化相关的表观遗传学机制提供了重要依据。     

宫颈癌中HPV16感染与Ezrin表达的关系

探讨了Ezrin在宫颈病变中的表达及其与癌浸润转移的关系,以及宫颈病变组织中HPV16 DNA的表达及临床意义,探索两者之间的关系。采用免疫组化SP法检测了40例宫颈鳞状细胞癌（CSCC）、38例CIN3、28例CIN1-2和15例正常宫颈组织中Ezrin的表达。采用原位杂交法检测各组中HPV16 DNA的表达。Ezrin在正常对照组、CIN1-2组、CIN3组和CSCC组阳性率分别为26.7%（4/15）、64.3%（18/28）、63.2%（24/38）、80%（32/40）,CSCC组的表达高于正常对照组（P〈0.05）,且与临床分期和病理分级无关,但与淋巴结转移有关;上述各组中HPV16 DNA表达阳性率分别为6.7%（1/15）、25%（7/28）、65.8%（25/38）、80%（32/40）,各组明显高于正常对照组（P〈0.05）;CIN3组明显高于CIN1-2组（P〈0.05）;HPV16 DNA的表达与CSCC临床分期、病理分级及有无淋巴结转移无关;Ezrin和HPV16 DNA表达呈正相关（rs=0.476,P〈0.05）。Ezrin在CSCC中的表达与宫颈癌的侵袭性行为有关,可能成为早期宫颈癌预后指标;Ezrin和HPV16感染呈正相关,两者可能协同作用导致宫颈癌的恶性发展。     

肺癌组织中AKAP12启动子区域甲基化状态研究

目的:探讨肺癌组织中A激酶锚定蛋白12(AKAP12)基因启动子区域异常甲基化情况及其临床意义。方法:用甲基化特异性PCR(MSP)检测肺癌组织中AKAP12基因启动子区域Cp G岛甲基化状态,分析其与肺癌患者病理参数的关系;采用亚硫酸盐测序法对包含17个Cp G岛的选定片段发生甲基化的频率进行分析。结果:通过甲基化特异性PCR(MSP)检测50例患者肺癌标本,32份标本(64.0%)被检测出AKAP12基因启动子区域存在异常甲基化。AKAP12基因甲基化水平在不同年龄组以及性别组中的差异无统计学意义(P0.05),而与肺癌的病理分期和分化程度的差异有显著统计学意义(P0.05)。不同标本在17个Cp G位点中发生甲基化的情况并不相同,其中7、9、10、11和13五个位点出现甲基化的比例较其余位点明显增高(P0.05)。结论:AKAP12启动子甲基化改变与肺癌恶性程度及肿瘤进展相关,7、9、10、11和13五个位点出现异常甲基化频率较高可能提示其对AKAP12正常表达具有一定的调控作用。     

高温胁迫对近江牡蛎Hsp90表达及CpG甲基化的影响

为了丰富广温性潮间带底栖生物的温度调控机制研究,本研究采用荧光定量PCR法、亚硫酸氢盐处理基因组DNA结合甲基化特异性PCR(Methylation specific PCR,MSP)法及染色质免疫共沉淀法,对40℃热胁迫24h后,近江牡蛎(Crassostrea rivularis)热休克蛋白90(Heat shock protein 90,Hsp90)的mRNA表达及其核心启动子甲基化的调控模式进行研究。结果显示:近江牡蛎成贝在40℃热胁迫24h后,其消化腺、腮和心脏组织中Hsp90mRNA表达显著升高(P0.05),核心启动子区CpG平均甲基化水平显著降低(P0.05),其中邻近热休克元件(Heat shock element,HSE)的CpG2、CpG3、CpG4位点甲基化水平显著降低(P0.05),CpG5位点甲基化水平无显著变化(P0.05),灰度分析显示消化腺和心脏组织中的Hsp90核心启动子与RNA聚合酶Ⅱ(RNA polymeraseⅡ)结合增强,腮组织中的Hsp90核心启动子与RNA polymeraseⅡ出现弱结合。表明Hsp90是近江牡蛎抵御高温胁迫的主要表达基因。     

Characterization of Ordovician carbonate reservoirs, southeastern Saskatchewan, Canada

The discovery of the prolific Ordovician Red River reservoirs in 1995 in southeastern Saskatchewan was the catalyst for extensive exploration activity which resulted in the discovery of more than 15 new Red River pools. The best yields of Red River production to date have been from dolomite reservoirs. Understanding the processes of dolomitization is, therefore, crucial for the prediction of the connectivity, spatial distribution and heterogeneity of dolomite reservoirs.The Red River reservoirs in the Midale area consist of 3～4 thin dolomitized zones, with a total thickness of about 20 m, which occur at the top of the Yeoman Formation. Two types of replacement dolomite were recognized in the Red River reservoir: dolomitized burrow infills and dolomitized host matrix. The spatial distribution of dolomite suggests that burrowing organisms played an important role in facilitating the fluid flow in the backfilled sediments. This resulted in penecontemporaneous dolomitization of burrow infills by normal seawater. The dolomite in the host matrix is interpreted as having occurred at shallow burial by evaporitic seawater during precipitation of Lake Almar anhydrite that immediately overlies the Yeoman Formation. However, the low δ18O values of dolomited burrow infills (-5.9‰～ -7.8‰, PDB) and matrix dolomites (-6.6‰～ -8.1‰, avg. -7.4‰ PDB) compared to the estimated values for the late Ordovician marine dolomite could be attributed to modification and alteration of dolomite at higher temperatures during deeper burial, which could also be responsible for its 87Sr/86Sr ratios (0.7084～0.7088) that are higher than suggested for the late Ordovician seawaters (0.7078～0.7080). The trace amounts of saddle dolomite cement in the Red River carbonates are probably related to "cannibalization" of earlier replacement dolomite during the chemical compaction.     

A computer generator for randomly layered structures

AcomputergeneratorforrandomlylayeredstructuresYUJia shun1,2,HEZhen hua2(1.TheInstituteofGeologicalandNuclearSciences,NewZealand;2.StateKeyLaboratoryofOilandGasReservoirGeologyandExploitation,ChengduUniversityofTechnology,China)Abstract:Analgorithmisintrod…     

An Index mechanism for multi-scale view in spatial databases

There are numerous geometric objects stored in the spatial databases. An importance function in a spatial database is that users can browse the geometric objects as a map efficiently. Thus the spatial database should display the geometric objects users concern about swiftly onto the display window. This process includes two operations:retrieve data from database and then draw them onto screen. Accordingly, to improve the efficiency, we should try to reduce time of both retrieving object and displaying them. The former can be achieved with the aid of spatial index such as R-tree, the latter require to simplify the objects. Simplification means that objects are shown with sufficient but not with unnecessary detail which depend on the scale of browse. So the major problem is how to retrieve data at different detail level efficiently. This paper introduces the implementation of a multi-scale index in the spatial database SISP (Spatial Information Shared Platform) which is generalized from R-tree. The difference between the generalization and the R-tree lies on two facets: One is that every node and geometric object in the generalization is assigned with a importance value which denote the importance of them, and every vertex in the objects are assigned with a importance value,too. The importance value can be use to decide which data should be retrieve from disk in a query. The other difference is that geometric objects in the generalization are divided into one or more sub-blocks, and vertexes are total ordered by their importance value. With the help of the generalized R-tree, one can easily retrieve data at different detail levels.Some experiments are performed on real-life data to evaluate the performance of solutions that separately use normal spatial index and multi-scale spatial index. The results show that the solution using multi-scale index in SISP is satisfying.     

海南岛地体及其毗邻陆缘晚中生代—新生代古地磁研究和构造演化

本文叙述了对海南岛及其毗邻大陆边缘白垩纪到第四纪地层岩石进行古地磁研究的全部工作过程。通过分析岩石中剩余磁矢量的磁偏角及磁倾角的变化,提出海南岛白垩纪以来经历的构造演化模式如下:早期伴随顺时针旋转而向南迁移,后期伴随逆时针转动并向北运移。联系该地区及邻区的地质、地球物理资料,对海南岛上述的构造地体运动提出以下认识:北部湾内早期有一拉张作用,主要是该作用使湾内地壳显著伸长减薄,形成北部湾盆地。从而导致了海南岛的早期构造运动,而海南岛后期的构造运动则主要是受南海海底扩张的影响。海南地体运动规律的阐明对于了解北部湾油气盆地的形成演化有重要的理论和实际意义。     

Exciton Seebeck in Molecular Systems

Various applications relevant to the exciton dynamics,such as the organic solar cell,the large-area organic light-emitting diodes and the thermoelectricity,are operating under temperature gradient.The potential abnormal behavior of the exicton dynamics driven by the temperature difference may affect the efficiency and performance of the corresponding devices.In the above situations,the exciton dynamics under temperature difference is mixed with     

Achieving Unusual States of Matter Under High Pressure

The elongation method,originally proposed by Imamura was further developed for many years in our group.As a method towards O(N)with high efficiency and high accuracy for any dimensional systems.This treatment designed for one-dimensional(ID)polymers is now available for three-dimensional(3D)systems,but geometry optimization is now possible only for 1D-systems.As an approach toward post-Hartree-Fock,it was also extended to     

《Chinese Science Bulletin》SUBJECT INDEX TO VOLUME 59(2014)

正~~     

An on-line scaling method for improving scalability of a database cluster

The explosive growth of the Internet and database applications has driven database to be more scalable and available, and able to support on-line scaling without interrupting service. To support more client's queries without downtime and degrading the response time, more nodes have to be scaled up while the database is running. This paper presents the overview of scalable and available database that satisfies the above characteristics. And we propose a novel on-line scaling method. Our method improves the existing on-line scaling method for fast response time and higher throughputs. Our proposed method reduces unnecessary network use, i.e. , we decrease the number of data copy by reusing the backup data. Also, our on-line scaling operation can be processed parallel by selecting adequate nodes as new node. Our performance study shows that our method results in significant reduction in data copy time.     

An improved R-tree based on childnode''s probability

R-Tree is a good structure for spatial searching. But in this indexing structure,either the sequence of nodes in the same level or sequence of traveling these nodes when queries are made is random. Since the possibility that the object appears in different MBR which have the same parents node is different, if we make the subnode who has the most possibility be traveled first, the time cost will be decreased in most of the cases. In some case, the possibility of a point belong to a rectangle will shows direct proportion with the size of the rectangle. But this conclusion is based on an assumption that the objects are symmetrically distributing in the area and this assumption is not always coming into existence. Now we found a more direct parameter to scale the possibility and made a little change on the structure of R-tree, to increase the possibility of founding the satisfying answer in the front sub trees. We names this structure probability based arranged R-tree (PBAR-tree).     

Integrating GIS Web services based on mediating architecture

The geographic information service is enabled by the advancements in general Web service technology and the focused efforts of the OGC in defining XML-based Web GIS service. Based on these models, this paper addresses the issue of services chaining,the process of combining or pipelining results from several interoperable GIS Web Services to create a customized solution. This paper presents a mediated chaining architecture in which a specific service takes responsibility for performing the process that describes a service chain. We designed the Spatial Information Process Language (SIPL) for dynamic modeling and describing the service chain, also a prototype of the Spatial Information Process Execution Engine (SIPEE) is implemented for executing processes written in SIPL. Discussion of measures to improve the functionality and performance of such system will be included.