取代脱氧脲苷的量子化学计算及分子对接

5取代6氮杂2’脱氧脲苷是一类疱疹单纯一型病毒胸苷激酶(ＨＳＶ1ＴＫ)抑制剂.研究此类化合物的合成、结构、杀菌活性及构效关系一直为科学界所关注1-3].ＨＳＶ1ＴＫ可以催化胸苷的磷酸化反应,使生成胸苷磷酸脂,在ＤＮＡ合成的控制中起着重要的作用.其晶体结构的发表4],使得我们能从分子水平上研究此类酶抑制剂与酶活性中心的作用机制,模拟其作用方式,从而实现ＨＳＶ1ＴＫ抑制剂的全新设计.本文从化合物(Ｉ)和(ＩＩ)(见图1)晶体结构出发,使用美国Ｔｒｉｐｏｓ公司开发的三维分子模拟软件包ＳＹＢＹＬ635],采用ＭＯＰＡＣ界面中ＰＭ36]程…

A Quantum and Docking Study of Substituted Deoxyuridines

substituted 6 aza 2' deoxyuridines are inhibitors of herps simplex virius type 1 thymidine kinase (HSV 1 TK). In this paper, the semiempirical self consistent field PM3 calculations have been undertaken for two typical HSV 1 TK inhibitors: compound (I) and (II)(to see Fig.1). Their active sites have been discussed on the basis of studies of electronic structure and correlative analysis. The molecular docking between the two inhibitors and HSV 1 TK active center has also been carried out. It is found that the major binding forces between the two inhibitors and enzyme arise from hydrogen bonding interactions and lipophilic stacking interactions. The result may be used for rational molecular design of new and more potent HSV 1 TK inhibitors.