琼胶酶高产海洋细菌QM42的发酵条件优化

通过单因素试验和正交试验对琼胶酶高产海洋细菌QM42发酵条件进行了优化.经过发酵培养试验,确定优化培养基组成:蛋白胨浓度5.0g/L、酵母粉浓度0.50g/L、琼胶浓度3.0g/L;在培养初始pH值为7.0、装液量50mL/150mL、培养盐度50g/L,29℃条件下发酵48h,粗酶液酶活力达到627.65U/mL.     

产琼胶酶菌株NBRC102603发酵条件优化及酶的分离纯化

通过正交试验对产琼胶酶海洋菌株NBRC102603发酵条件进行了优化,优化得到的发酵产酶条件为:蛋白胨浓度5.0 g/L、酵母膏浓度1.25 g/L、琼胶浓度4.0 g/L、装瓶量100 mL、接种量1%、转速150 r/min,28℃下发酵48 h后酶活力达到58.94 U/mL,比未优化前提高了2.08倍。经纯化得到琼胶酶A和琼胶酶B,琼胶酶A纯化倍数为17.29倍,酶比活力为870.51 U/mg;琼胶酶B纯化倍数为16.65倍,酶比活力为838.39 U/mg。纯化后琼胶酶经SDS-PAGE检测,显示为单一条带,其相对分子质量酶A约为83.6 ku、酶B约为36.8 ku。     

Isolation and Characterization of a Glycosyl Hydrolase Family 16 β-Agarase from a Mangrove Soil Metagenomic Library

A mangrove soil metagenomic library was constructed and a β-agarase gene designated as AgaML was isolated by functional screening. The gene encoded for a 659-amino-acids polypeptide with an estimated molecular mass of 71.6 kDa. The deduced polypeptide sequences of AgaML showed the highest identity of 73% with the glycoside hydrolase family 16 β-agarase from Microbulbifer agarilyticus in the GenBank database. AgaML was cloned and highly expressed in Escherichia coli BL21(DE3). The purified recombinant protein, AgaML, showed optimal activity at 50 °C and pH 7.0. The kinetic parameters of K_m and V_max values toward agarose were 4.6 mg·mL⁻¹ and 967.5 μM·min⁻¹·mg⁻¹, respectively. AgaML hydrolyzed the β-1,4-glycosidic linkages of agar to generate neoagarotetraose (NA4) and neoagarohexaose (NA6) as the main products. These characteristics suggest that AgaML has potential application in cosmetic, pharmaceuticals and food industries.     

琼脂糖酶产生菌的筛选和培养基优化

从太岁中筛选得到一株初始产酶较高的琼脂糖酶产生菌,经形态和分子生物学分析方法鉴定之后,认定其属于类芽孢杆菌属(Paenibacillus),命名为Paenibacillus sp.P1(简称为P1).P1为革兰氏阴性菌,短杆状细胞,对明胶和纤维素都没有水解活性.研究该菌的生长及产酶过程发现,该菌株最适发酵产酶时长是40...     

一种新型琼胶酶AgaB的基因克隆及生物信息学分析

利用从青岛近海发现的一株高产琼胶酶的假别单胞菌CY24(Pseudoaltero-monassp.CY24)建立基因组DNA文库后,用水解圈的方法从中筛选到一个具有琼胶酶活性的阳性克隆pBA1。pBA1的序列分析结果表明,插入DNA片段的长度为6.7 kb,含有4个推测读码框架,并利用亚克隆法确定了琼胶酶的编码基因agaB。agaB基因的开放阅读框架为1 437 bp,编码478个氨基酸,理论分子量为50.9 kDa,在N末端有一个包含38个氨基酸的信号肽。推测的成熟蛋白质的分子量和等电点分别为47.2 kDa和4.83。AgaB的氨基酸序列与已知蛋白质包括所有的糖苷水解酶序列完全没有相似性;HCA的蛋白质二级结构分析结果表明,AgaB不同于其他已知琼胶酶。因此,推测AgaB为一新型的琼胶酶,代表一个新的糖苷水解酶家族。     

外切型琼胶酶AgaO的高效表达及酶学性质表征

根据大肠杆菌的密码子偏好性,优化外切型琼胶酶AgaO的基因并人工全合成,克隆入表达载体质粒pET-30a(+),转化大肠杆菌BL21(DE3),优化表达条件即诱导温度、诱导时间和诱导剂IPTG终浓度,纯化重组蛋白rEAgaO,并分析其酶学性质变化。结果表明,重组酶rEAgaO在16 ℃、IPTG终浓度0.1 mmol/L条件下诱导20 h时表达量最高;95%以上的重组蛋白质为水溶性表达,产量约为1432.7 mg/L,较优化前原始基因的产量提高了10.9倍;重组酶rEAgaO的最适反应温度为45 ℃,在低于40 ℃的温度下预处理2 h后,仍然具有90%以上的残余活性,最适pH为7.0,在pH6.0~10.0不同缓冲体系4 ℃处理2 h仍保留69.5%以上的活性;该酶降解琼脂糖后的最终产物经TLC分析鉴定为新琼二糖。基因密码子优化虽不改变蛋白质氨基酸序列,但可明显提高水溶性重组蛋白质的产率及酶活,对促进相关酶类的生产和应用具有借鉴意义。     

响应面法优化嗜热菌Bacillus sp.B Ⅱ-5产琼胶酶的发酵培养基条件

对印度尼西亚热泉菌Bacillus sp.B Ⅱ-5琼胶酶发酵菌株进行发酵条件优化.在前期实验的基础上,选取蛋白胨、酵母粉、琼胶、氯化钙、氯化钠、初始pH值和接种量作为主要菌株产酶影响因素.再利用Plackett-Burman设计筛选出对酶活影响最为显著的3个因素,即蛋白胨、琼胶和氯化钙;采用最陡爬坡实验逼近最大相应区域后再利用Box-Behnken中心设计及响应面分析法对实验数据进行回归分析,得出最优的产酶培养条件.实验表明产酶最优培养的条件为:酵母粉0.4％、蛋白胨0.665％、琼胶1.160‰,氯化钙7.080 mmol/L、初始pH 7.5、接种量1％和氯化钠添加量4‰.对Bacillus sp.BⅡ-5琼胶酶发酵菌株进行发酵条件优化,并且建立数学模型,为该菌发酵琼胶酶在工业生产应用方面奠定了一定的理论基础.     

海洋细菌NBRC10260产琼胶酶发酵条件优化

通过正交试验法对产琼胶酶海洋菌株NBRC102603发酵条件进行优化,优化培养基为:蛋白胨4.0g/L、酵母粉1.25g/L、琼胶粉5.0g/L;在装液量150mL(500mL三角瓶)、28℃、150r/min、接种量为1%条件下发酵48h酶活力达到最高,为56.89U/mL,比未优化前提高了2.01倍.     

Extracellular Production of a Novel Endo-β-Agarase AgaA from Pseudomonas vesicularis MA103 that Cleaves Agarose into Neoagarotetraose and Neoagarohexaose

The gene agaA, of the isolated marine bacterium Pseudomonas vesicularis MA103, comprised 2958-bp nucleotides encoding a putative agarase AgaA of 985 amino acids, which was predicted to contain a signal peptide of 29 amino acids in the N-terminus, a catalytic domain of glycoside hydrolase 16 (GH16) family, a bacterial immunoglobulin group 2 (Big 2), and three carbohydrate binding modules 6 (CBM 6). The gene agaA was cloned and overexpressed in Escherichia coli, and the optimum temperatures for AgaA overexpression were 16, 20 and 24 °C. The agaA was cloned without its signal peptide for cytosolic production overexpression, whereas it was cloned with the heterologous signal peptide PelB and its endogenous signal peptide for periplasmic and extracellular productions, respectively. Extracellular and periplasmic rAgaA showed greater activity than that of cytosolic rAgaA, indicating that membrane translocation of AgaA may encourage proper protein folding. Time-course hydrolysis of agarose by rAgaA was accomplished and the products were analyzed using thin layer chromatography and matrix-assisted laser desorption inoization-time of flight mass spectrometry, indicating that AgaA from P. vesicularis was an endo-type β-1,4 agarase that cleaved agarose into neoagarotetraose and neoagarohexaose as the final products.