Commentary on Krishnaswamy et al. - Quantifying and mapping biodiversity and ecosystem services: Utility of a multi-season NDVI based Mahalanobis distance surrogate

Remote sensing is a powerful tool for characterizing, estimating or modelling species diversity. Differences in environmental properties of different habitats should lead to differences of spectral responses, which can be detected by satellite imagery. Hence, spectral distance may be related to species diversity. Based on previous studies, Krishnaswamy et al. [Krishnaswamy, J., Bawa, K. S., Ganeshaiah, K. N., & Kiran, M. C. (2009). Quantifying and mapping biodiversity and ecosystem services: Utility of a multi-season NDVI based Mahalanobis distance surrogate. Remote Sensing of Environment.] used spectral distance to estimate species diversity. Since a noisy scatterplot of species versus spectral diversity is expected, the commonly used Ordinary Least Square regression may fail to detect trends which occur across other quantiles than the mean.Krishnaswamy et al. [Krishnaswamy, J., Bawa, K. S., Ganeshaiah, K. N., & Kiran, M. C. (2009). Quantifying and mapping biodiversity and ecosystem services: Utility of a multi-season NDVI based Mahalanobis distance surrogate. Remote Sensing of Environment.] proposed a quantile-quantile plot method as an alternative to conventional regression based approaches which are inappropriate for dependent pair-wise dissimilarity or similarity data. By this commentary I demonstrate the utility of a quantile regression technique to complement the Krishnaswamy et al. [Krishnaswamy, J., Bawa, K. S., Ganeshaiah, K. N., & Kiran, M. C. (2009). Quantifying and mapping biodiversity and ecosystem services: Utility of a multi-season NDVI based Mahalanobis distance surrogate. Remote Sensing of Environment.] graphical approach in terms of a predictive model.     

Yeast diversity in crop-growing environments in Cameroon

In the present study, we have investigated the occurrence of yeast flora on several agricultural products coming from crop-growing environments in Cameroon, to provide better knowledge of the biodiversity of yeast flora, and to thus define the impact of this biodiversity on food products. The yeast biodiversity was investigated using traditional culture-dependent methods, along with culture-independent methods. The culture-dependent approach was carried out using both direct and enrichment procedures, to detect the broadest possible presence of yeast species. A total of 151 strains belonging to 26 different yeast species were isolated and identified using restriction pattern analysis of the internal transcribed spacer region 5.8S-ITS and sequence analysis of D1/D2 domain of 26S rRNA gene. The enrichment isolation procedures carried out in high-sugar media allowed the recognition of fermentative species such as Saccharomyces cerevisiae and Torulaspora delbrueckii, which have previously not been detected using direct isolation methodology. The results of culture-independent method using DGGE patterns and sequencing of the DNA bands revealed a lower number of yeast species when compared with the culture-dependent methodology even if the identification of several yeast species not detected by traditional microbiological procedures such as Candida tropicalis and Hanseniaspora uvarum is allowed. Thus, these multiphasic approaches to study yeast biodiversity (culture-dependent and -independent methods) have allowed us to get a more complete picture of the microbial diversity in these natural environments.     

The Biodiversity and Climate Change Virtual Laboratory: Where ecology meets big data

Advances in computing power and infrastructure, increases in the number and size of ecological and environmental datasets, and the number and type of data collection methods, are revolutionizing the field of Ecology. To integrate these advances, virtual laboratories offer a unique tool to facilitate, expedite, and accelerate research into the impacts of climate change on biodiversity. We introduce the uniquely cloud-based Biodiversity and Climate Change Virtual Laboratory (BCCVL), which provides access to numerous species distribution modelling tools; a large and growing collection of biological, climate, and other environmental datasets; and a variety of experiment types to conduct research into the impact of climate change on biodiversity.Users can upload and share datasets, potentially increasing collaboration, cross-fertilisation of ideas, and innovation among the user community. Feedback confirms that the BCCVL's goals of lowering the technical requirements for species distribution modelling, and reducing time spent on such research, are being met.     

Chemical and biological variability of hot pepper fruits (Capsicum annuum var. acuminatum L.) in relation to maturity stage

The aim of the present work was to evaluate the chemical composition and the radical-scavenging and antioxidant activities of hot pepper fruits (Capsicum annuum L. var. acuminatum) at three maturity stages (small green, green and red). GC–MS analysis of n-hexane and chloroform fractions showed a different composition between the three stages of ripening. The first stage of maturation (small green) showed the highest radical-scavenging activity (IC₅₀ of 129 μg/ml). Using the bovine brain peroxidation assay, the methanolic extract of green pepper showed significant antioxidant activity (IC₅₀ of 522 μg/ml). Addition of methanolic extract of red and green pepper inhibited oxidation of linoleic acid. Methanolic extract of red pepper showed greater antioxidative potency than the others (IC₅₀ of 3 μg/ml). The different composition of lipophilic compounds and the various amount of phenolics, showed in the three stage of ripening of C. annuum var. acuminatum fruits, modifies the antioxidant activity.     

Natural links: naturalistic golf courses as wildlife habitat

Worldwide, there are over 25,000 golf courses. In the United States, there are approximately 15,000, with developers building about 350 new courses each year. Japan, Taiwan, China, and other countries are experiencing a similar golf boom. Some developers regard golf course development as one of the fastest growing types of land development in the world. Typically considered by ecologists to be an environmental problem, scientists are now reexamining golf courses to assess their potential to be wildlife habitat. Can naturalistic courses (those with substantial amounts of native wildlife habitat) actually benefit wildlife populations, especially birds, and still be attractive to golfers? My ecological research with a well-known naturalized links-style golf course in Kansas suggests that a naturalistic golf course can support significant numbers of birds, including many threatened species. When compared to a nearby natural area, the golf course equaled the natural area in total bird species richness but not in the relative abundance of specific kinds of birds. Naturalistic golf courses, while not natural areas, can complement biological reserves, military reservations, greenbelts, parks, farms, backyards and other units of the regional habitat mosaic. The large amount of habitat on naturalistic courses also reduces water runoff, irrigation, and chemical inputs. Furthermore, raising the profile of naturally landscaped golf courses can engage thousands of additional people in wildlife habitat preservation issues. Naturalistic courses are growing in popularity and the golfing community is responsive to aesthetic and environmental concerns. With the involvement of ecologists, this burgeoning interest in natural habitats on golf courses may significantly increase the amount of wildlife habitat, especially if designers build these kinds of courses in urban areas and on degraded landscapes such as landfills, quarries, and eroded lands.     

城市生物多样性恢复途径与实例研究

城市生物多样性是城市生存与发展的基础,是实现城市生态系统可持续性的保证。本文以相关生态学理论为指导,针对广州市海珠生态城的生态恢复实际,并结合海珠生态城\"以万亩果林湿地为核心,打造具有岭南水乡魅力的花城、水城、绿城特色生态城市样板区\"的总体定位,提出了该区域的生物多样性恢复目标和规划思路,并重点围绕湿地生境分区、栖息地修复、水环境改善、恢复物种筛选、区域生物多样性构建等方面进行了探讨,建立了海珠生态城湿地生物多样性恢复规划策略。     

建造以乡土植物为主体的园林绿地

指出外来植物扰乱生态平衡、破坏自然环境与人文景观以及对人们生活的严重影响等各种弊端,对园林绿化的现状以及方式方法进行了反思,提出以乡土植物为主体的园林绿地建设是城市园林绿化的惟一出路.最后,指出在进行以乡土植物为主体的城市园林绿地建设过程中存在的问题及解决办法.     

服务于城市公园的生物多样性设计简

面对城市生物多样性逐步丧失和城市生态危机的加重,在物种多样性保护的同时强化生物多样性的载体——生境多样性的规划营建是实现城市生物多样性再生的关键技术之一。梳理城市公园生境要素单元分类的基础上,文章阐述基于生境单元的城市公园生物多样性评估方法,分析游憩活动对于公园生境的干扰与分区管理策略,并通过后湾沼泽地、布鲁克林大桥公园、米勒生态公园和圣路易斯森林公园4个典型案例解读,探讨城市咸水沼泽生境、城市浅水（淡水沼泽）生境、城市草原生境、城市森林生境这4种主要城市公园异质性生境设计、建造与管理要点,最后从一般设计流程和核心设计控制指标两方面提出基于生境单元分类体系的城市公园生物多样性设计框架。     

Differential response of selected taxa to landscape context and agricultural intensification

Understanding the dynamics of biodiversity in changing agricultural landscapes is a goal for nature conservation and agricultural policies. Agriculture operates at several spatio-temporal levels from field to landscape, and induces differential response of communities according to their ecological traits. Reactions of several taxa to landscape and agricultural changes was conducted along landscape gradients in northern Brittany (France) gathering 14 sites. Landscapes ranged from fine grained areas, with a large proportion of permanent grasslands, wood and hedgerows, to coarse grained ones dominated by crops. Response of communities were either loss of species along the gradient (as for Diptera Chironomidae and Empididae), replacement (Coleoptera Carabidae) and no change in species composition (small mammals). In this paper, we present why these taxa react in such different ways according to their life history traits, their mobility patterns and to which parameters of landscape structure or agriculture intensification they are sensitive. Density of hedgerow networks, and permeability of individual hedgerows determine the spatial distribution of adults Diptera according to their flying ability. Mean body size of carabid beetles significantly decreases along the gradient of agricultural intensification, small species adapted to disturbance replacing large ones that are characteristic of stable habitats. The same small mammal species are found all along the two gradients, but their relative abundance is linked to the importance of crops versus more stable habitats in the landscape.We concluded that species survival in those fine grained agricultural landscapes depends on processes operating at the site scale and defining habitat quality, and processes operating at the landscape and/or metapopulation scale such as landscape modifications in connectivity and habitat availability.