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1.
Calanus finmarchicus is a key‐structural species of the North Atlantic polar biome. The species plays an important trophic role in subpolar and polar ecosystems as a grazer of phytoplankton and as a prey for higher trophic levels such as the larval stages of many fish species. Here, we used a recently developed ecological niche model to assess the ecological niche (sensu Hutchinson) of C. finmarchicus and characterize its spatial distribution. This model explained about 65% of the total variance of the observed spatial distribution inferred from an independent dataset (data of the continuous plankton recorder survey). Comparisons with other types of models (structured population and ecophysiological models) revealed a clear similarity between modeled spatial distributions at the scale of the North Atlantic. Contemporary models coupled with future projections indicated a progressive reduction of the spatial habitat of the species at the southern edge and a more pronounced one in the Georges Bank, the Scotian Shelf and the North Sea and a potential increase in abundance at the northern edge of its spatial distribution, especially in the Barents Sea. These major changes will probably lead to a major alteration of the trophodynamics of North Atlantic ecosystems affecting the trophodynamics and the biological carbon pump. 相似文献
2.
Cueto M 《History and philosophy of the life sciences》2003,25(3):319-335
During the turn of the 20th century medical geography in Peru concentrated in the study of a native disease (bartonellosis, also known as Carrión's disease and Verruga Peruana) and reinforced the relationship between the country's 'natural' regions (coast, highlands and Amazon) and different patterns of disease. Expert knowledge on these themes was portrayed as important not only for the practice of medicine but also for the development of the country. This knowledge was instrumental for an emergent local medical tradition and for legitimizing the authority, power and prestige of Lima's medical elite. The city was the capital of a country whose population was mainly Indian and rural, and lived in the highlands. This article studies the development of medical geography in Peru emphasizing the role played by Ernesto Odriozola, an influential clinician from Lima trained in Paris. 相似文献
3.
Background
Since the first fungal genome sequences became available, investigators have been employing comparative genomics to understand how fungi have evolved to occupy diverse ecological niches. The secretome, i.e. the entirety of all proteins secreted by an organism, is of particular importance, as by these proteins fungi acquire nutrients and communicate with their surroundings.Results
It is generally assumed that fungi with similar nutritional lifestyles have similar secretome compositions. In this study, we test this hypothesis by annotating and comparing the soluble secretomes, defined as the sets of proteins containing classical signal peptides but lacking transmembrane domains of fungi representing a broad diversity of nutritional lifestyles. Secretome size correlates with phylogeny and to a lesser extent with lifestyle. Plant pathogens and saprophytes have larger secretomes than animal pathogens. Small secreted cysteine-rich proteins (SSCPs), which may comprise many effectors important for the interaction of plant pathogens with their hosts, are defined here to have a mature length of ≤ 300 aa residues, at least four cysteines, and a total cysteine content of ≥5%. SSCPs are found enriched in the secretomes of the Pezizomycotina and Basidiomycota in comparison to Saccharomycotina. Relative SSCP content is noticeably higher in plant pathogens than in animal pathogens, while saprophytes were in between and closer to plant pathogens. Expansions and contractions of gene families and in the number of occurrences of functional domains are largely lineage specific, e.g. contraction of glycoside hydrolases in Saccharomycotina, and are only weakly correlated with lifestyle. However, within a given lifestyle a few general trends exist, such as the expansion of secreted family M14 metallopeptidases and chitin-binding proteins in plant pathogenic Pezizomycotina.Conclusions
While the secretomes of fungi with similar lifestyles share certain characteristics, the expansion and contraction of gene families is largely lineage specific, and not shared among all fungi of a given lifestyle.Electronic supplementary material
The online version of this article (doi:10.1186/1471-2164-15-722) contains supplementary material, which is available to authorized users. 相似文献4.
Giraud-Billoud M Abud MA Cueto JA Vega IA Castro-Vazquez A 《Comparative biochemistry and physiology. Part A, Molecular & integrative physiology》2011,158(4):506-512
The physiological ability to estivate is relevant for the maintenance of population size in the invasive Pomacea canaliculata. However, tissue reoxygenation during arousal from estivation poses the problem of acute oxidative stress. Uric acid is a potent antioxidant in several systems and it is stored in specialized tissues of P. canaliculata. Changes in tissue concentration of thiobarbituric acid reactive substances (TBARS), uric acid and allantoin were measured during estivation and arousal in P. canaliculata. Both TBARS and uric acid increased two-fold during 45 days estivation, probably as a consequence of concomitant oxyradical production during uric acid synthesis by xanthine oxidase. However, after arousal was induced, uric acid and TBARS dropped to or near baseline levels within 20 min and remained low up to 24h after arousal induction, while the urate oxidation product allantoin continuously rose to a maximum at 24h after induction, indicating the participation of uric acid as an antioxidant during reoxygenation. Neither uric acid nor allantoin was detected in the excreta during this 24h period. Urate oxidase activity was also found in organs of active snails, but activity shut down during estivation and only a partial and sustained recovery was observed in the midgut gland. 相似文献
5.
Rafael O. García Cueto Adalberto Tejeda Martínez Ernesto Jáuregui Ostos 《International journal of biometeorology》2010,54(4):335-345
The aim of this work is to study heat waves (HWs) in Mexicali, Mexico, because numerous deaths have been reported in this
city, caused by heatstroke. This research acquires relevancy because several studies have projected that the health impacts
of HWs could increase under various climate change scenarios, especially in countries with low adaptive capacity, as is our
case. This paper has three objectives: first, to analyze the observed change in the summer (1 June to 15 September) daily
maximum temperature during the period from 1951 to 2006; secondly, to characterize the annual and monthly evolution of frequency,
duration and intensity of HWs; and finally, to generate scenarios of heat days (HDs) by means of a statistical downscaling
model, in combination with a global climate model (HadCM3), for the 2020s, 2050s, and 2080s. The results show summer maximum
temperatures featured warming and cooling periods from 1951 until the mid-1980s and, later, a rising tendency, which prevailed
until 2006. The duration and intensity of HWs have increased for all summer months, which is an indicator of the severity
of the problem; in fact, there are 2.3 times more HWs now than in the decade of the 1970s. The most appropriate distribution
for modeling the occurrence of HDs was the Weibull, with the maximum temperature as co-variable. For the 2020s, 2050s, and
2080s, HDs under a medium-high emissions scenario (A2) could increase relative to 1961–1990, by 2.1, 3.6, and 5.1 times, respectively,
whereas under a medium-low emissions scenario (B2), HDs could increase by 2.4, 3.4, and 4.0, for the same projections of time. 相似文献
6.
R. Llauger D. Becker J. Cueto E. Peralta V. González M. Rodríguez & W. Rohde 《Journal of Phytopathology》2002,150(7):390-395
Lethal Yellowing (LY) disease of coconut palm (Cocos nucifera L.) in Cuba has been reported since the end of the 19th century. In order to ascertain the presence of phytoplasmas associated with this disease, leaf samples were taken from plants showing typical disease symptoms and assayed for the LY agent by the polymerase chain reaction (PCR) using LY‐specific primers. Selected PCR amplification products were cloned, sequenced and compared to that of a Mexican LY isolate from the Yucatán region. The results obtained confirm the presence of LY phytoplasma in Cuba. Cuban and Mexican isolates show an overall high degree of sequence similarity with occasional point mutations and small deletions or insertions. Based on these identified genetic differences, LY isolates from the Havana and the Yucatán region cluster together and apart from isolates originating at Maisí in eastern Cuba. 相似文献
7.
CRAIG R. WHITE DAVID BOERTMANN DAVID GRÉMILLET PATRICK J. BUTLER JONATHAN A. GREEN GRAHAM R. MARTIN 《Ibis》2011,153(1):170-174
Arctic seas have warmed and sea ice has retreated. This has resulted in range contraction and population declines in some species, but it could potentially be a boon for others. Great Cormorants Phalacrocorax carbo have a partially wettable plumage and seem poorly suited to foraging in Arctic waters. We show that rates of population change of Cormorant colonies around Disko Bay, Greenland, are positively correlated with sea surface temperature, suggesting that they may benefit from a warming Arctic. However, although Cormorant populations may increase in response to Arctic warming, the extent of expansion of their winter range may ultimately be limited by other factors, such as sensory constraints on foraging behaviour during long Arctic nights. 相似文献
8.
Simulated brain tumor growth dynamics using a three-dimensional cellular automaton 总被引:10,自引:0,他引:10
Kansal AR Torquato S Harsh GR IV Chiocca EA Deisboeck TS 《Journal of theoretical biology》2000,203(4):367-382
We have developed a novel and versatile three-dimensional cellular automaton model of brain tumor growth. We show that macroscopic tumor behavior can be realistically modeled using microscopic parameters. Using only four parameters, this model simulates Gompertzian growth for a tumor growing over nearly three orders of magnitude in radius. It also predicts the composition and dynamics of the tumor at selected time points in agreement with medical literature. We also demonstrate the flexibility of the model by showing the emergence, and eventual dominance, of a second tumor clone with a different genotype. The model incorporates several important and novel features, both in the rules governing the model and in the underlying structure of the model. Among these are a new definition of how to model proliferative and non-proliferative cells, an isotropic lattice, and an adaptive grid lattice. 相似文献
9.
Marco Pautasso Katrin Böhning‐Gaese Philippe Clergeau Victor R. Cueto Marco Dinetti Esteban Fernández‐Juricic Marja‐Liisa Kaisanlahti‐Jokimäki Jukka Jokimäki Michael L. McKinney Navjot S. Sodhi David Storch Ludwik Tomialojc Peter J. Weisberg John Woinarski Richard A. Fuller Elena Cantarello 《Global Ecology and Biogeography》2011,20(3):426-436
Aim Despite the increasing pace of urbanization, little is known about how this process affects biodiversity globally. We investigate macroecological patterns of bird assemblages in urbanized areas relative to semi‐natural ecosystems. Location World‐wide. Methods We use a database of quantitative bird surveys to compare key assemblage structure parameters for plots in urbanized and semi‐natural ecosystems controlling for spatial autocorrelation and survey methodology. We use the term ‘urbanized’ instead of ‘urban’ ecosystems as many of the plots were not located in the centre of towns but in remnant habitat patches within conurbations. Results Some macroecological relationships were conserved in urbanized landscapes. Species–area, species–abundance and species–biomass relationships did not differ significantly between urbanized and non‐urbanized environments. However, there were differences in the relationships between productivity and assemblage structure. In forests, species richness increased with productivity; in both forests and open habitats, the evenness of species abundances declined as productivity increased. Among urbanized plots, instead, both species richness and the evenness of species abundances were independent of variation in productivity. Main conclusions Remnant habitats within urbanized areas are subject to many ecological alterations, yet key macroecological patterns differ remarkably little in urbanized versus non‐urbanized plots. Our results support the need for increased conservation activities in urbanized landscapes, particularly given the additional benefits of local experiences of biodiversity for the human population. With increasing urbanization world‐wide, broad‐scale efforts are needed to understand and manage the effects of this driver of change on biodiversity. 相似文献
10.
Emma Bell Angela Sherry Giovanni Pilloni Ana Suárez-Suárez Margaret A. Cramm Guillermo Cueto Ian M. Head Casey R. J. Hubert 《Environmental microbiology》2020,22(1):456-465
Thermophilic endospores are widespread in cold marine sediments where the temperature is too low to support growth and activity of thermophiles in situ. These endospores are likely expelled from warm subsurface environments and subsequently dispersed by ocean currents. The endospore upper temperature limit for survival is 140°C, which can be tolerated in repeated short exposures, potentially enabling transit through hot crustal fluids. Longer-term thermal tolerance of endospores, and how long they could persist in an environment hotter than their maximum growth temperature, is less understood. To test whether thermophilic endospores can survive prolonged exposure to high temperatures, sediments were incubated at 80–90°C for 6, 12 or 463 days. Sediments were then cooled by 10–40°C, mimicking the cooling in subsurface oil reservoirs subjected to seawater injection. Cooling the sediments induced sulfate reduction, coinciding with an enrichment of endospore-forming Clostridia. Different Desulfofundulus, Desulfohalotomaculum, Desulfallas, Desulfotomaculum and Desulfofarcimen demonstrated different thermal tolerances, with some Desulfofundulus strains surviving for >1 year at 80°C. In an oil reservoir context, heat-resistant endospore-forming sulfate-reducing bacteria have a survival advantage if they are introduced to, or are resident in, an oil reservoir normally too hot for germination and growth, explaining observations of reservoir souring following cold seawater injection. 相似文献