Comparative phylogeography of African rain forest trees: A review of genetic signatures of vegetation history in the Guineo-Congolian region

The biogeographic history of the African rain forests has been contentious. Phylogeography, the study of the geographic distribution of genetic lineages within species, can highlight the signatures of historical events affecting the demography and distribution of species (i.e. population fragmentation or size changes, range expansion/contraction) and, thereby, the ecosystems they belong to. The accumulation of recent data for African rain forests now enables a first biogeographic synthesis for the region. In this review, we explain which phylogeographic patterns are expected under different scenarios of past demographic change, and we give an overview of the patterns detected in African rain forest trees to discuss whether they support alternative hypotheses regarding the history of the African rain forest cover. The major genetic discontinuities in the region support the role of refugia during climatic oscillations, though not necessarily following the classically proposed scenarios. We identify in particular a genetic split between the North and the South of the Lower Guinean region. Finally we provide some perspectives for future study.     

Determination of Rare Earth Elements, Sc, Y, Zr, Ba, Hf and Th in Geological Samples by ICP-MS after Tm Addition and Alkaline Fusion

We present a revised method for the determination of concentrations of rare earth (REE) and other trace elements (Y, Sc, Zr, Ba, Hf, Th) in geological samples. Our analytical procedure involves sample digestion using alkaline fusion (NaOH-Na₂O₂) after addition of a Tm spike, co-precipitation on iron hydroxides, and measurement by sector field-inductively coupled plasma-mass spectrometry (SF-ICP-MS). The procedure was tested successfully for various rock types (i.e., basalt, ultramafic rock, sediment, soil, granite), including rocks with low trace element abundances (sub ng g⁻¹). Results obtained for a series of nine geological reference materials (BIR-1, BCR-2, UB-N, JP-1, AC-E, MA-N, MAG-1, GSMS-2, GSS-4) are in reasonable agreement with published working values.     

Phytolith assemblages as a promising tool for reconstructing Mediterranean Holocene vegetation

The reliability of phytolith assemblage analysis for characterizing Mediterranean vegetation is investigated in this study. Phytolith assemblages are extracted from modern and buried Holocene soils from the middle Rhône valley (France). The relation between modern phytolith assemblages and the surrounding vegetation, as well as between fossil assemblages and contemporaneous vegetation, already reconstructed through other proxies, is discussed. We demonstrate that the main northwestern Mediterranean biomes are well distinguished by soil phytolith assemblage analysis. In particular, the density of pine and nonconiferous trees (densities expressed relatively to the grass cover) and the overall degree of opening of the vegetation appear well recorded by three phytolith indexes. North Mediterranean vegetation changes during the Holocene period, mainly tree line shifts, pine wood development and deforestation are poorly documented, due to the scarcity of proxy-preserving sites. Phytolith assemblage analysis of soils, buried soils, and sediments appears to be a promising technique to fill this gap.     

Meadow fragmentation and reproductive output of the SE Asian seagrass Enhalus acoroides

Flower and fruit production of the abundant, tall, long-lived, dioecious, surface-pollinating seagrass species Enhalus acoroides (L.) Royle were estimated at seven sites in the reef flats off Bolinao (NW Luzon, The Philippines) featuring different fragmentation of the seagrass meadows. Fragmentation of the seagrass meadow was quantified as cover of E. acoroides and all seagrass species present in 20×20 m plots. E. acoroides and overall seagrass cover were correlated positively. The proportion of female flowers of E. acoroides that developed a fruit increased sharply as overall seagrass cover was around 50%. Apparent sex ratio bore no relationship with overall seagrass cover. This threshold-type of relationship suggests that fragmentation of seagrass meadows can have a major effect on the reproductive output of this species. A possible mechanism underlying these results would be a non-linear increase of the efficiency of trapping the surface-dispersed pollen with increasing seagrass canopy density. This provides the first evidence based on real data that fragmentation can affect the population dynamics of seagrass species.     

The Ashima/MIT Mars GCM and argon in the martian atmosphere

We investigate the ability of modern general circulation models (GCMs) to simulate transport in the martian atmosphere using measurements of argon as a proxy for the transport processes. Argon provides the simplest measure of transport as it is a noble gas with no sinks or sources on seasonal timescales. Variations in argon result solely from ‘freeze distillation’, as the atmosphere condenses at the winter poles, and from atmospheric transport. Comparison of all previously published models when rescaled to a common definition of the argon enhancement factor (EF) suggest that models generally do a poor job in predicting the peak enhancement in southern winter over the winter pole – the time when the capability of the model transport approaches are most severely tested. Despite observed peak EF values of ～6, previously published model predictions peaked at EF values of only 2–3. We introduce a new GCM that provides a better treatment of mass conservation within the dynamical core, includes more sophisticated tracer transport approaches, and utilizes a cube–sphere grid structure thus avoiding the grid-point convergence problem at the pole that exists for most current Mars GCMs. We describe this model – the Ashima Research/Massachusetts Institute of Technology Mars General Circulation Model (Ashima/MIT Mars GCM) and use it to demonstrate the significant sensitivity of peak EF to the choices of transport approach for both tracers and heat. We obtain a peak EF of 4.75 which, while over 50% higher than any prior model, remains well short of the observed value. We show that the polar EF value in winter is primarily determined by the competition between two processes: (1) mean meridional import of lower-latitude air not enriched in argon and (2) the leakage of enriched argon out of the polar column by eddies in the lowest atmospheric levels. We suggest possibilities for improving GCM representation of the CO₂ cycle and the general circulation that may further improve the simulation of the argon cycle. We conclude that current GCMs may be insufficient for detailed simulation of transport-sensitive problems like the water cycle and potentially also the dust cycle.     

北大西洋气候记录中末次冰消期的年代确定

为了确定控制末次冰消期的机制以及引起冰消期事件的顺序，最重要的是获得应用于大陆和海洋两者的气候记录的时间结构。放射性碳测年已经广泛应用于海洋沉积物的日历测年，但它是建立在表层水的表观年龄 (相对于大气层来说 )保持不变的假设上的。这里我们提出了北大西洋 40° N以北的表层水的表观年龄 (或储层年龄 )在过去 20 ka中的变化证据，在两个岩心中，我们发现了在 Heinrich 1 (15 ka BP)结束的地方，表层水表观年龄比今天大 1230± 600 a和 1940± 750 a，在新仙女木冷期结束的地方比今天大 820± 430 a 和 1010± 340 a。在 Bolling_Allerod暖期，两个老的储层年龄之间，表层水表观年龄可以与目前的值进行比较。我们的研究结果证实冰心年代学和整个冰消期的北大西洋海洋记录是一致的。因此，这表示了 40° N以北的北大西洋海洋碳测年需要作这些明显可变效应的校正。     

GGR Biennial Critical Review: Analytical Developments Since 2014

This GGR biennial critical review covers developments and innovations in key analytical methods published since January 2014, relevant to the chemical, isotopic and crystallographic characterisation of geological and environmental materials. In nine selected analytical fields, publications considered to be of wide significance are summarised, background information is provided and their importance evaluated. In addition to instrumental technologies, this review also presents a summary of new developments in the preparation and characterisation of rock, microanalytical and isotopic reference materials, including a précis of recent changes and revisions to ISO guidelines for reference material characterisation and reporting. Selected reports are provided of isotope ratio determinations by both solution nebulisation MC‐ICP‐MS and laser ablation‐ICP‐MS, as well as of radioactive isotope geochronology by LA‐ICP‐MS. Most of the analytical techniques elaborated continue to provide new applications for geochemical analysis; however, it is noted that instrumental neutron activation analysis has become less popular in recent years, mostly due to the reduced availability of nuclear reactors to act as a neutron source. Many of the newer applications reported here provide analysis at increasingly finer resolution. Examples include atom probe tomography, a very sensitive method providing atomic scale information, nanoscale SIMS, for isotopic imaging of geological and biological samples, and micro‐XRF, which has a spatial resolution many orders of magnitude smaller than conventional XRF.     

The impact of high altitude aircraft on the ozone layer in the stratosphere

The paper discusses the potential effects on the ozone layer of gases released by the engines of proposed high altitude supersonic aircraft. The major problem arises from the emissions of nitrogen oxides which have the potential to destroy significant quantities of ozone in the stratosphere. The magnitude of the perturbation is highly dependent on the cruise altitude of the aircraft. Furthermore, the depletion of ozone is substantially reduced when heterogeneous conversion of nitrogen oxides into nitric acid on sulfate aerosol particles is taken into account in the calculation. The sensitivity of the aerosol load on stratospheric ozone is investigated. First, the model indicates that the aerosol load induced by the SO₂ released by aircraft is increased by about 10–20% above the background aerosols at mid-high latitude of the Northern Hemisphere at 15 km for the NASA emission scenario A (the NASA emission scenarios are explained in Tables I to III). This increase in aerosol has small effects on stratospheric ozone. Second, when the aerosol load is increased following a volcanic eruption similar to the eruption of El Chichon (Mexico, April 1982), the ozone column in spring increases by as much as 9% in response to the injection of NO _x from the aircraft with the NASA emission scenario A. Finally, the modeled suggests that significant ozone depletion could result from the formation of additional polar stratospheric clouds produced by the injection of H₂O and HNO₃ by the aircraft engines.     

Seasonal prediction of global sea level anomalies using an ocean–atmosphere dynamical model

Advanced warning of extreme sea level events is an invaluable tool for coastal communities, allowing the implementation of management policies and strategies to minimise loss of life and infrastructure damage. This study is an initial attempt to apply a dynamical coupled ocean–atmosphere model to the prediction of seasonal sea level anomalies (SLA) globally for up to 7 months in advance. We assess the ability of the Australian Bureau of Meteorology’s operational seasonal dynamical forecast system, the Predictive Ocean Atmosphere Model for Australia (POAMA), to predict seasonal SLA, using gridded satellite altimeter observation-based analyses over the period 1993–2010 and model reanalysis over 1981–2010. Hindcasts from POAMA are based on a 33-member ensemble of seasonal forecasts that are initialised once per month for the period 1981–2010. Our results show POAMA demonstrates high skill in the equatorial Pacific basin and consistently exhibits more skill globally than a forecast based on persistence. Model predictability estimates indicate there is scope for improvement in the higher latitudes and in the Atlantic and Southern Oceans. Most characteristics of the asymmetric SLA fields generated by El-Nino/La Nina events are well represented by POAMA, although the forecast amplitude weakens with increasing lead-time.