Structure of electron-capture dissociation fragments from charge-tagged peptides probed by tunable infrared multiple photon dissociation

In this study, we propose the first spectroscopic structural characterization of c-type ions produced by ECD of a peptide. The structure of c-type ions formed by electron capture dissociation and the overall mechanism leading to their formation are still a question of debate. Depending on the mechanism, c-type ions have been proposed to have either an enol-imine structure (-C(OH)NH) or an amide one (-C(O)-NH2). Since these ions are isomeric, mass spectrometry only cannot discriminate between them, but infrared spectroscopy can bring experimental evidence and help determine which scheme is operative. Using the coupling between a tunable free electron laser and a FT-ICR mass spectrometer, we show that c-type ions have an amide structure, characterized by an IR signature of the C=O stretch at 1731 cm(-1). This result is particularly interesting from the perspective of the elucidation of the ECD mechanism.     

Synthesis of pyridine-based polyaminocarboxylic ligands bearing a thioalkyl anchor

A bicyclic tetraazatriacetic chelating agent containing a thioalkyl pendant group was prepared. Four synthetic routes have been investigated via a Mitsunobu reaction from 2,4-[bishydroxymethyl]-3-hydroxy-pyridine 1. Deprotection of trityl thioether compound 5c led to ligand 6c in 22% overall yield from the starting 3-hydroxypyridine.     

Development of Sustainable Chemistry in Madagascar: Example of the Valuation of CNSL and the Use of Chromones as an Attractant for Mosquitoes

This article describes a part of the results obtained from the cooperation between the University of Lyon1 (France) and the University of Antananarivo (Madagascar). It shows (among others) that useful research can be carried out in developing countries of the tropics if their social, technical, and economic conditions are taken into account. The concepts and methods associated with so-called “green chemistry” are particularly appropriated for this purpose. To illustrate this approach, two examples are shown. The first deals with industrial ecology and concerns waste transformation from the production of cashew nut into an amphiphilic product, oxyacetic derivatives. This product was obtained with a high yield and in a single step reaction. It exhibited an important surfactant property similar to those of the main fossil-based ones but with a much lower ecological impact. The second talks about chemical ecology as an alternative to insecticides and used to control dangerous mosquito populations. New substituted chromones were synthesized and showed biological activities toward Aedes albopictus mosquito species. Strong repellent properties were recorded for some alkoxylated products if others had a significant attractant effect (Kairomone) depending on their stereochemistry and the length of the alkyl chain.     

Molecular Complexes of Simple Anions with Electron‐Deficient Arenes: Spectroscopic Evidence for Two Types of Structural Motifs for Anion–Arene Interactions

Anion–π interactions between a π‐acidic aromatic system and an anion are gaining increasing recognition in chemistry and biology. Herein, the binding features of an electron‐deficient aromatic system (1,3,5‐trinitrobenzene (TNB)) and selected anions (OH^?, Br^?, and I^?) are examined in the gas phase by using the combined information derived from collision‐induced dissociation experiments at variable energy, infrared multiple‐photon dissociation spectroscopy, and quantum chemical calculations. We provide spectroscopic evidence for two different structural motifs of anion–arene complexes depending on the nature of the anion. The TNB–OR^? complexes (R=H, or alkyl groups which were studied earlier) adopt an anionic σ‐complex structure whereby RO^? attacks the aromatic ring with covalent bond formation, and develops a tetrahedral ring carbon bound to H and OR. The halide complexes rather conform to a structure in which the TNB moiety is hardly altered, and the halogen is placed on an unsubstituted carbon atom over the periphery of the ring at a C–X distance that is appreciably longer than a typical covalent bond length. The ensuing structural motif, previously characterized in the solid state and named weak σ interaction, is now confirmed by an IR spectroscopic assay in the gas phase, in which the sampled species are unperturbed by crystal packing or solvation effects.     

Intramolecular pi-dimerization in a 1,1'-bis(verdazyl)ferrocene diradical

The solid state structure of 1,1'-bis(verdazyl)ferrocene reveals the two radical moieties associated intramolecularly to give the first example of a pi-dimer of a stable verdazyl radical. The pi-dimer structure is not maintained in solution. Magnetic characterization indicates that the radicals are sufficiently strongly antiferromagnetically coupled so as to render the molecule diamagnetic at room temperature.     

Multiscale modeling of a fluid saturated medium with double porosity: Relevance to the compact bone

In this paper, we develop a model of a homogenized fluid-saturated deformable porous medium. To account for the double porosity the Biot model is considered at the mesoscale with a scale-dependent permeability in compartments representing the second-level porosity. This model is treated by the homogenization procedure based on the asymptotic analysis of periodic “microstructure”. When passing to the limit, auxiliary microscopic problems are introduced, which provide the corrector basis functions that are needed to compute the effective material parameters. The macroscopic problem describes the deformation-induced Darcy flow in the primary porosities whereas the microflow in the double porosity is responsible for the fading memory effects via the macroscopic poro-visco-elastic constitutive law. For the homogenization procedure, we use the periodic unfolding method. We discuss also the stress and flow recovery at multiple scales characterizing the heterogeneous material. The model is proposed as a theoretical basis to describe compact bone behavior on multiple scales.     

Quantitative MR renography using a calibrated internal signal (ERETIC)

To measure MR renograms, cortical and medullary kidney signal intensity evolution is followed after contrast agent injection. To obtain an accurate quantitative signal measurement, the use of a reference signal is necessary to correct the potential MRI system variations in time. The ERETIC method (Electronic Reference To access In vivo Concentrations) provides an electronic reference signal. It is synthesized as an amplitude modulated RF pulse applied during the acquisition. The ERETIC method was as precise as the external tube reference method but presents major advantages like its free adjustability (shape, location and magnitude) to the characteristics of the organ studied as well as its not taking room inside the magnet. Even though ERETIC showed a very good intrinsic stability, systems' variations still affect its signal in the same way as real NMR signals are affected. This method can be easily implemented on any imaging system with two RF channels.     

EDTA and DTPA modified ligands as sequestering agents for uranyl decorporation

Synthesis of modified EDTA and DTPA ligands and determination of their binding affinities for the uranyl cation are described.Thanks to a screening method, based on a chromophoric complex displacement procedure, chelating properties were studied in aqueous media under various pH conditions for evaluation of their in vivo uranyl-removal efficacy. Each ligand showed a more or less pronounced affinity for uranium. Specific ligands based on EDTA or DTPA analogues containing sulfocatecholamide (CAMS) were found to exhibit a significant affinity towards uranyl ion in acidic, neutral or basic conditions.     

Effectiveness of multilayer viscoelastic insulators to prevent occurrences of brake squeal: A numerical study

The purpose of this publication is to give an overview of the actual role of multi-layered viscoelastic parts, so called “shims”, to prevent squeal noises of automotive brake systems. Since shear stress is usually used to damp thin structures in their bending modes it is commonly believed to be the largest underwent by shims. To check this assumption and considering that stresses underwent by shims cannot be measured experimentally, the authors have computed them with the help of a detailed and realistic finite element model. Contrary to what shims manufacturers say, this study exhibits the fact that shims are almost uniquely solicited in their normal direction in brake systems. Secondly, the study focuses on the added damping and stiffening induced by the viscoelastic materials. In order to take into account these materials, a realistic frequency dependent viscoelastic behavior has been integrated in the simulations. Finally, the study shows certains eigenmodes for which the viscoelastic behavior of the shims reveals instabilities that would not exist without it. It is shown that this is due to coalescence phenomenon.     

Compact and portable holographic camera using photorefractive crystals. Application in various metrological problems

We present a compact holographic interferometer that uses a photorefractive crystal of the sillenite family as a holographic recording medium. Its development is based on a previous prototype that showed lack of flexibility and portability. We briefly discuss the main improvements leading to a compact device. Applications of this instrument in various metrological problems are shown, among which are two that were not already considered using holography, namely measurement of a thermal expansion coefficient and detection of fingerprints. Received: 20 December 2000 / Revised version: 8 February 2001 / Published online: 20 April 2001