小兴安岭三种林型叶面积指数的估测

利用Winscanopy2006冠层分析仪测定2009年7月初至11月初小兴安岭白桦次生林、谷地云冷杉林、阔叶红松林的有效叶面积指数(LAIe),并将经过木质部分所占比率、冠层水平集聚和簇内集聚校正的11月初LAIe作为真实叶面积指数(LAIt),结合凋落物法测定3种林型的LAIt及其季节动态.结果表明:调查期间,白桦次生林的LAIe在7月达到峰值(2.21),谷地云冷杉林、阔叶红松林的LAIe在8月达到峰值,分别为2.57、2.68.白桦次生林、谷地云冷杉林、阔叶红松林的LAIt均在7月达到峰值,分别为3.44、3.86、6.93;相对于本文探讨的方法,光学仪器所测定的LAIe在最高叶面积指数期分别低估33.1％、32.9％、66.0％;而在整个调查期内,谷地云冷杉林和阔叶红松林LAIe平均低估22.8％和56.5％,白桦次生林平均高估13.2％.     

基于光学仪器法测定谷地云冷杉林叶面积指数的季节变化

利用半球摄影法(DHP)和LAI-2000植物冠层分析仪两种光学仪器法(间接法)以及凋落物法(直接法),研究了小兴安岭谷地云冷杉林叶面积指数(LAI)的季节变化,并构建了不同季节直接法与间接法测定的LAI间的相关关系.结果表明: 在整个试验期间,DHP测定的LAI比直接法测定值低估40%～48%, LAI-2000植物冠层分析仪的低估范围为15%～26%;不同时期直接法与DHP和LAI-2000植物冠层分析仪测定的LAI均显著相关, 且均可合并为A、B、C 3类预测模型, 可以分别预测5和11月, 6、9和10月, 7和8月的LAI.本研究结果可为高效、准确地测定针叶林LAI的季节变化提供参考.     

小兴安岭三种林型叶面积指数的估测

利用Winscanopy2006冠层分析仪测定2009年7月初至11月初小兴安岭白桦次生林、谷地云冷杉林、阔叶红松林的有效叶面积指数(LAI_e),并将经过木质部分所占比率、冠层水平集聚和簇内集聚校正的11月初LAI_e作为真实叶面积指数(LAI_t),结合凋落物法测定3种林型的LAI_t及其季节动态.结果表明： 调查期间,白桦次生林的LAI_e在7月达到峰值(2.21),谷地云冷杉林、阔叶红松林的LAI_e在8月达到峰值,分别为2.57、2.68.白桦次生林、谷地云冷杉林、阔叶红松林的LAI_t均在7月达到峰值,分别为3.44、3.86、6.93;相对于本文探讨的方法,光学仪器所测定的LAI_e在最高叶面积指数期分别低估33.1%、32.9%、66.0%;而在整个调查期内,谷地云冷杉林和阔叶红松林LAI_e平均低估22.8%和56.5%,白桦次生林平均高估13.2%.
     

利用不同方法测定红松人工林叶面积指数的季节动态

采用2种异速生长方程法、凋落物法、综合法(对光学仪器法进行木质部分及集聚效应校正后结合凋落物法)和光学仪器法测定了小兴安岭红松(Pinus koraiensis)人工林的叶面积指数(LAI)。首先利用光学仪器法测定有效叶面积指数(Le)的季节动态;其次为获得相对准确LAI,基于生长季节(5—8月)的展叶调查,结合凋落物法、综合法和2种异速生长方程法分别测定LAI的季节动态。结果表明:生长季节红松叶片8月初停止生长,迟于其他树种约两周;不同方法测定红松人工林LAI的季节变化均呈单峰型,且在8月初达到峰值,分别为异速生长方法-B(10.58)凋落物法(7.90)异速生长方法-A(6.70)综合法(4.41)光学仪器法(1.81);在整个调查期内(5月至11月),相对于异速生长方法-B、凋落物法、异速生长方法-A和综合法,光学仪器法分别平均低估81.69%、75.50%、70.18%和48.90%。本研究探讨了非破坏条件下测定红松人工林LAI季节动态的直接方法,并比较了不同方法之间的差异,研究结果可为有效测定常绿针叶林LAI提供参考。     

自动曝光对半球摄影法测量叶面积指数及其季节变化的影响

自动曝光是影响半球摄影法(DHP)测量叶面积指数(LAI)精度的重要误差源之一.本研究基于小兴安岭地区的阔叶红松林、白桦次生林、红松人工林和兴安落叶松人工林,利用DHP和LAI-2200植物冠层分析仪分别测量6—9月每个月中旬的LAI,首先比较两种方法测量LAI的差异性,再检验森林类型和测量时期对建立两种方法测定值间的相关关系是否存在显著影响,最后构建适于校正不同森林类型不同时期自动曝光对DHP测量LAI产生误差的经验模型.结果表明: 4种森林类型4个时期内,在自动曝光设置下DHP测量的LAI比LAI-2200测量值低估20%～49%;森林类型对构建两种方法测量LAI值的经验模型不存在显著影响,而测量时期存在显著影响.本研究构建的A、B两种分类经验模型,分别适用于校正4种森林类型在6和9月、7和8月DHP测量的LAI.经分类经验模型校正后,DHP测量4种森林类型4个时期的LAI值提高了45%～79%,测量精度可提高到83%～94%.通过DHP和LAI-2200测量LAI值间的经验模型,可有效校正自动曝光对DHP测量LAI的影响,极大地提高其测量精度,为使用DHP快捷、高效地测量不同森林类型的LAI及其季节动态提供技术支持.     

利用数字图像估测棉花叶面积指数

叶面积指数是指示棉花长势、产量形成和高产群体调控等信息的重要结构特征参数。本研究的目的在于利用基于冠层图像光照叶片和光照土壤分量的图像透光率估测棉花叶面积指数。通过3年不同种植密度、品种、施氮量和灌水量的田间试验,在棉花不同的生育期用数码相机、LAI-2000冠层仪和线性光量子传感器采集数据并进行破坏性取样测定,分析图像透光率的有效性和建立LAI估测模型,进而对图像方法、LAI-2000和破坏性取样方法进行比较和分析。结果表明：(1)在太阳高度角最大且变化最小的正午时段,数码相机测量的图像透光率与线性光量子传感器测量的冠层透光率较一致且相对稳定。(2)图像透光率能反映除吐絮期以外各时期的冠层透光状况,但是当LAI大于5时图像透光率出现饱和。(3)综合分析2009和2010年数据,建立了图像透光率估测LAI的模型(R2=0.8438, SE=0.5605);利用2007年独立试验资料检验估测模型的性能,模型检验的拟合度较高(R2=0.8767)且预测误差较小(RMSE=0.4305),当LAI＞5时模型的预测能力降低。(4)数字图像、LAI-2000和破坏性取样三种方法测量的LAI值之间均呈现显著的线性相关(R2＞0.85),但是图像透光率的饱和性致使当LAI＞5时明显低估叶面积指数。     

利用3种校正方案提高间接法测定兴安落叶松人工林叶面积指数的精度

木质部和集聚效应是影响间接法测定叶面积指数(LAI)精度的主要因素, 尤其是木质部的校正一直存在争议。针对这一问题, 该研究首先利用半球摄影法(DHP)和LAI-2000植物冠层分析仪法(LAI-2000法) 2种间接法测定了小兴安岭兴安落叶松(Larix gmelinii)人工林叶面积最大时期的有效LAI (L_e), 然后提出了A、B、C 3种校正方案来提高间接法的测定精度。同时, 利用凋落物法和异速生长方程法2种直接法测定LAI, 以凋落物法测定值为标准来评估3种校正方案的校正效果, 并检验天顶角范围对校正结果是否存在显著影响。结果表明: 在0-45° (1-3环)、0-60° (1-4环)、45°-60° (4环)及0-75° (1-5环) 4种不同天顶角范围内, DHP测定的L_e比凋落物法、异速生长方程法测定值分别低估19%-32%和8%-29%; 而LAI-2000法也得到相似的结论, 分别低估9%-30%和8%-28%。虽然校正方案A高估了木质部对LAI的贡献, 但在45º-60º天顶角范围内, 能有效地校正DHP测定的L_e, 在1-3环和1-4环天顶角范围内, 能有效地校正LAI-2000法测定的L_e。4种天顶角范围内, 校正方案B均能有效地校正DHP测定的L_e。整体来看, 4种天顶角范围内, 校正方案C对DHP和LAI-2000法测定值的校正效果均优于其他2种方案。研究结果表明除木质部和集聚效应外, 天顶角范围的选择也是决定间接法测定LAI精度的重要因素。     

3类典型温带山地森林的叶面积指数的季节动态: 多种监测方法比较

 叶面积指数(leaf area index, LAI)是定量描述冠层结构的最有效指标之一。鉴于森林冠层三维结构的高度复杂性和异质性, 迄今仍没有形成统一标准的LAI测量方法。该文利用LAI-2000冠层分析仪、CI-110冠层分析仪和半球摄影法(digital hemispherical photograph, DHP), 对北京东灵山地区以蒙古栎(Quercus mongolica)为主的落叶阔叶林、华北落叶松(Larix gmelinii var. principis-rupprechtii)林和油松(Pinus tabuliformis)林的有效叶面积指数(effective leaf area index, LAI_e)进行了动态监测, 探寻其季节变化规律。为准确地估算温带山地主要森林类型的LAI, 对光学仪器测量值进行了去除木质成分、聚集效应等校正, 与基于凋落物收集法的相应实测值进行了比较分析。结果表明: 3种典型森林在生长季期间叶片生长均呈现单峰型; 3种光学仪器测量方法的同期LAI_e数值大小顺序为: LAI-2000冠层分析仪>DHP>CI-110冠层分析仪。光学仪器的直接测量值LAI_e包含了木质成分的贡献, 钝化了季节动态的变化幅度, 这对有明显季节交替的落叶林尤为突出。经校正, LAI-2000冠层分析仪和DHP的测量值与实测值都表现出显著的相关性, 其中LAI-2000冠层分析仪最适于采用基于空隙大小的校正方法, 而基于空隙度和空隙大小的综合算法则是校正DHP的最佳选择。结合经济成本和野外实际操作等因素考虑, DHP具有更大的推广优势, 特别适用于温带山地落叶林。     

Measuring seasonal dynamics of leaf area index in a mixed conifer-broadleaved forest with direct and indirect methods

利用光学仪器法能够快速、高效地测定森林生态系统的叶面积指数(leaf area index, LAI)。然而, 评估该方法测定针阔混交林LAI季节动态准确性的研究较少。该研究基于凋落物法测定了小兴安岭地区阔叶红松(Pinus koraiensis)林LAI的季节动态, 其结果可代表真实的LAI。参考真实的LAI, 对半球摄影法(digital hemispherical photography, DHP)和LAI-2000植物冠层分析仪测定的有效叶面积指数(effective LAI, L_e)进行了评估。首先对DHP测定LAI过程中采用的不合理曝光模式(自动曝光)进行了系统校正。同时, 测定了光学仪器法估测LAI的主要影响因素(包括木质比例(woody-to-total area ratio, α)、集聚指数(clumping index, Ω_E)和针簇比(needle-to-shoot area ratio, γ_E))的季节变化。结果表明: 3种不同方法测定的LAI均表现为单峰型的季节变化, 8月初达到峰值。从5月至11月, DHP测定的L_e比真实的LAI低估50%-59%, 平均低估55%; 而LAI-2000植物冠层分析仪测定的L_e比真实的LAI低估19%-35%, 平均低估27%。DHP测定的L_e 经过自动曝光, α、Ω_E和γ_E校正后, 精度明显提高, 但仍比真实的LAI低估6%-15%, 平均低估9%; 相对而言, LAI-2000植物冠层分析仪测定的L_e经过α、Ω_E和γ_E校正后, 精度明显提高, 各时期与真实的LAI的差异均小于9%。研究结果表明, 考虑木质部和集聚效应对光学仪器法的影响后, DHP和LAI-2000植物冠层分析仪均能相对准确地测定针阔混交林LAI的季节动态, 其中, DHP的测定精度高于85%, 而LAI-2000植物冠层分析仪的测定精度高于91%。     

利用直接法和间接法测定针阔混交林叶面积指数的季节动态

利用光学仪器法能够快速、高效地测定森林生态系统的叶面积指数(leaf area index, LAI)。然而, 评估该方法测定针阔混交林LAI季节动态准确性的研究较少。该研究基于凋落物法测定了小兴安岭地区阔叶红松(Pinus koraiensis)林LAI的季节动态, 其结果可代表真实的LAI。参考真实的LAI, 对半球摄影法(digital hemispherical photography, DHP)和LAI-2000植物冠层分析仪测定的有效叶面积指数(effective LAI, L_e)进行了评估。首先对DHP测定LAI过程中采用的不合理曝光模式(自动曝光)进行了系统校正。同时, 测定了光学仪器法估测LAI的主要影响因素(包括木质比例(woody-to-total area ratio, α)、集聚指数(clumping index, Ω_E)和针簇比(needle-to-shoot area ratio, γ_E))的季节变化。结果表明: 3种不同方法测定的LAI均表现为单峰型的季节变化, 8月初达到峰值。从5月至11月, DHP测定的L_e比真实的LAI低估50%-59%, 平均低估55%; 而LAI-2000植物冠层分析仪测定的L_e比真实的LAI低估19%-35%, 平均低估27%。DHP测定的L_e 经过自动曝光, α、Ω_E和γ_E校正后, 精度明显提高, 但仍比真实的LAI低估6%-15%, 平均低估9%; 相对而言, LAI-2000植物冠层分析仪测定的L_e经过α、Ω_E和γ_E校正后, 精度明显提高, 各时期与真实的LAI的差异均小于9%。研究结果表明, 考虑木质部和集聚效应对光学仪器法的影响后, DHP和LAI-2000植物冠层分析仪均能相对准确地测定针阔混交林LAI的季节动态, 其中, DHP的测定精度高于85%, 而LAI-2000植物冠层分析仪的测定精度高于91%。     

Plant-Parasitic Nematodes of South Viet Nam

Between 1974 and 1978, 2,842 identifications of plant-parasitic nematodes were made from more than 1,700 soil and plant samples collected in eight provinces of South Viet Nam. Species in nine genera—Helicotylenchus, Criconemoides, Meloidogyne, Pratylenchus, Tylenchorhynchus, Hoplolaimus, Hirschmanniella, Xiphinema, and Rotylenchulus—comprised 96.1% of the identifications; the remaining 3.9% were species of 11 genera. Fourteen genera were associated with rice which was grown on about 2,500,000 ha in 1970. Of these, Ditylenchus, Hirschmanniella, and Meloidogyne were most important. Ditylenchus angustus caused severe damage to about 50,000 ha of flooded rice in the Mekong Delta in 1976. Hirschmanniella spp. were found in all samples examined from flooded rice fields. Meloidogyne spp. were common in rice seedbeds, upland rice, and rice not kept flooded continuously. Meloidogyne and Pratylenchus spp. were found in roots of 22 of the 32 crop plants sampled. Little or no attempt was made in South Viet Nam to control nematodes.     

Study of types of some species of "Filaria" (Nematoda) parasites of small mammals described by Von Linstow and Molin

Parasitic nematodes from the Berlin (ZMB) and Vienna (NMW) Museum collections referred to the genus Filaria Mueller, 1787 by von Linstow or Molin were studied. Three samples were in good condition and the specimens redescribed. Litomosa hepatica (von Linstow, 1897) n. comb., sample ZMB Vermes Entozoa 3368, from the megachiropteran Pteropus neohibernicus, Bismarck Archipelago, resembles L. maki Tibayrenc, Bain & Ramanchandran, 1979, from Pteropus vampyrus, in Malaysia, but the buccal capsule differs. Both species display particular morphological characters which differ from species of Litomosa parasitic in microchiropterans. The remaining material originates from Brazil. The spicule morphology of Litomosoides circularis (von Linstow, 1899) Chandler, 1931, sample ZMB Vermes Entozoa 1059 from Hesperomys spec. (= Holochilus brasiliensis), Porto Alegre, confirms that it belongs to the sigmodontis group; the microfilaria presents characters of the genus Litomosoides, e.g. body attenuated at both extremities and salient cephalic hook. Taxonomic discussions by others confirm that species of Litomosoides belonging to the sigmodontis group and described subsequently are distinct from L. circularis. Litomosoides serpicula (Molin, 1858) Guerrero, Martin, Gardner & Bain, 2002, is redescribed, sample NMW 6323 from the bat Phyllostoma spiculatum (= Sturnira lilium), Ypanema. It is very close to L. brasiliensis Almeida, 1936, type host Moytis sp., but distinguished by a single ring in the buccal capsule, rather than two, supporting previous conclusions that the taxon L. brasiliensis, as generally regarded, may represent a complex of species. Samples NMW 6322 and NMW 6324, from other bats and also identified by Molin (1858) as Filaria serpicula, contain unidentifiable fragments of Litomosoides incertae sedis. Filaria hyalina von Linstow, 1890, sample ZMB Vermes Entozoa Q 3905 from Sorer vulgaris (= Sorex araneus), is incertae sedis because it contains two unidentifiable posterior parts of male, which might be an acuarid, Stammerinema sp. Filaria vesperuginis von Linstow, 1885, sample ZMB Vermes Entozoa Q 3929, from the bat Vesperugo serotinus (= Eptesicus serotinus), contains encysted nematode larvae and is a nomen dubium.     

Multilocus phylogenetic analysis of the genus Aeromonas

A broad multilocus phylogenetic analysis (MLPA) of the representative diversity of a genus offers the opportunity to incorporate concatenated inter-species phylogenies into bacterial systematics. Recent analyses based on single housekeeping genes have provided coherent phylogenies of Aeromonas. However, to date, a multi-gene phylogenetic analysis has never been tackled. In the present study, the intra- and inter-species phylogenetic relationships of 115 strains representing all Aeromonas species described to date were investigated by MLPA. The study included the independent analysis of seven single gene fragments (gyrB, rpoD, recA, dnaJ, gyrA, dnaX, and atpD), and the tree resulting from the concatenated 4705 bp sequence. The phylogenies obtained were consistent with each other, and clustering agreed with the Aeromonas taxonomy recognized to date. The highest clustering robustness was found for the concatenated tree (i.e. all Aeromonas species split into 100% bootstrap clusters). Both possible chronometric distortions and poor resolution encountered when using single-gene analysis were buffered in the concatenated MLPA tree. However, reliable phylogenetic species delineation required an MLPA including several “bona fide” strains representing all described species.     

Molecular phylogeny of Phoma and allied anamorph genera: Towards a reclassification of the Phoma complex

The present generic concept of Phoma is broadly defined, with nine sections being recognised based on morphological characters. Teleomorph states of Phoma have been described in the genera Didymella, Leptosphaeria, Pleospora and Mycosphaerella, indicating that Phoma anamorphs represent a polyphyletic group. In an attempt to delineate generic boundaries, representative strains of the various Phoma sections and allied coelomycetous genera were included for study. Sequence data of the 18S nrDNA (SSU) and the 28S nrDNA (LSU) regions of 18 Phoma strains included were compared with those of representative strains of 39 allied anamorph genera, including Ascochyta, Coniothyrium, Deuterophoma, Microsphaeropsis, Pleurophoma, Pyrenochaeta, and 11 teleomorph genera. The type species of the Phoma sections Phoma, Phyllostictoides, Sclerophomella, Macrospora and Peyronellaea grouped in a subclade in the Pleosporales with the type species of Ascochyta and Microsphaeropsis. The new family Didymellaceae is proposed to accommodate these Phoma sections and related anamorph genera. The present study demonstrated that Phoma radicina, the type species of Phoma sect. Paraphoma and Phoma heteromorphospora, the type species of Phoma sect. Heterospora can be assigned to the Phaeosphaeriaceae and Leptosphaeriaceae respectively.     

Fate map of the distal portion of Drosophila proboscis as inferred from the expression and mutations of basic patterning genes

The late-third-instar labial disc is comprised of two disc-proper cell layers, one representing mainly the ventral half of the anterior compartment (L-layer) and the other, the dorsal half of the anterior compartment and most, if not all, of the posterior compartment (M-layer). In the L-layer, Distal-less represses homothorax whereas no Distal-less-dependent homothorax repression occurs in the M-layer where Distal-less is coexpressed with homothorax. In wild-type labial discs, clawless, one of the two homeobox genes expressed in distal cells receiving maximum (Decapentaplegic+Wingless) signaling activity in leg and antennal discs, is specifically repressed by proboscipedia. A fate map, inferred from data on basic patterning gene expression in larval and pupal stages and mutant phenotypes, indicates the inner surface of the labial palpus, which includes the pseudotracheal region, to be a derivative of the distal portion of the M-layer expressing wingless, patched, Distal-less and homothorax. The outer surface of the labial palpus with more than 30 taste bristles derives from an L-layer area consisting of dorsal portions of the anterior and posterior compartments, each expressing Distal-less. Our analysis also indicates that, in adults and pupae, the anterior-posterior boundary, dividing roughly equally the outer surface of the distiproboscis, runs along the outer circumference of the inner surface of distiproboscis.     

Microbial transformation of zaluzanin-D

Microbial transformation of zaluzanin-D using different fungi gave 11,13-dihydrozaluzanin-C, zaluzanin-C, 4,16,11,13 - tetrahydro zaluzanin-C, estafiatone, dihydroestafiatol and dihydroestafiatone.     

Molar microwear and dietary reconstructions of fossil cercopithecoidea from the Plio-Pleistocene deposits of South Africa

The South African Plio-Pleistocene cave deposits have yielded a diverse cercopithecoid fauna. In this study, the possible dietary proclivities of these extinct species are examined using details of molar microwear. Although sample sizes are often small, wear patterns suggest possible temporal changes in the diets of Parapapio jonesi from Makapansgat to Sterkfontein, of Papio robinsoni from Sterkfontein to Swartkrans, and Cercopithecoides williamsi from Makapansgat to Sterkfontein to Swartkrans. However, there does not appear to have been a significant change in the dietary habits of Parapapio broomi over time. The microwear patterns of the two temporally successive congeners, Theropithecus darti and T. oswaldi show no significant differences from one another. The sympatric congeners, Parapapio broomi and Pp. jonesi, have microwear signatures that differ significantly at Makapansgat (Members 3 and 4) but not at Sterkfontein (Member 4). Finally, the microwear analyses suggest that the extinct cercopithecoid species did not necessarily have diets similar to those of their closest living relatives.     

Vascular Streak Dieback of cacao in Southeast Asia and Melanesia: in planta detection of the pathogen and a new taxonomy

Vascular Streak Dieback (VSD) disease of cacao (Theobroma cacao) in Southeast Asia and Melanesia is caused by a basidiomycete (Ceratobasidiales) fungus Oncobasidium theobromae (syn. =Thanatephorus theobromae). The most characteristic symptoms of the disease are green-spotted leaf chlorosis or, commonly since about 2004, necrotic blotches, followed by senescence of leaves beginning on the second or third flush behind the shoot apex, and blackening of infected xylem in the vascular traces at the leaf scars resulting from the abscission of infected leaves. Eventually the shoot apex is killed and infected branches die. In susceptible cacao the fungus may grow through the xylem down into the main stem and kill a mature cacao tree. Infections in the stem of young plants prior to the formation of the first 3-4 lateral branches usually kill the plant. Basidiospores released from corticioid basidiomata developed on leaf scars or along cracks in the main vein of infected leaves infect young leaves. The pathogen commonly infects cacao but there are rare reports from avocado. As both crops are introduced to the region, the pathogen is suspected to occur asymptomatically in native vegetation. The pathogen is readily isolated but cultures cannot be maintained. In this study, DNA was extracted from pure cultures of O. theobromae obtained from infected cacao plants sampled from Indonesia. The internal transcribed spacer region (ITS), consisting of ITS1, 5.8S ribosomal RNA and ITS2, and a portion of nuclear large subunit (LSU) were sequenced. Phylogenetic analysis of ITS sequences placed O. theobromae sister to Ceratobasidium anastomosis groups AG-A, AG-Bo, and AG-K with high posterior probability. Therefore the new combination Ceratobasidium theobromae is proposed. A PCR-based protocol was developed to detect and identify C. theobromae in plant tissue of cacao enabling early detection of the pathogen in plants. A second species of Ceratobasidium, Ceratobasidium ramicola, identified through ITS sequence analysis, was isolated from VSD-affected cacao plants in Java, and is widespread in diseased cacao collected from Indonesia.