美洲大蠊变应原Per a 2的生物信息学分析

目的：了解美洲大蠊变应原Per a 2的分子生物学特征。方法：从Genbank中获得Per a 2的核酸序列,用ExPaSy、EBI和NCBI网站的在线软件推导出编码氨基酸序列及其理化性质、空间结构、功能位点,并在Blastp比对后选择不同物种同源序列计算井刖双率、构建分子进化树。结果：Per a 2由351个氨基酸细戍,分子量为38119Da、等电点为490、分子式为C1217H1825N285O297S18,为细胞外疏水性蛋白、属于肽酶a家族,信号肽位于1～20氨基酸处,三个跨膜螺旋区域依次位于1～19aa、51～78aa、282～300aa处;二级结构由α-螺旋（9．4％）、β延伸（28．49％）、随机线圈（62．11％）组成;美洲大蠊和德国小蠊相似率为55％、与马德拉蜚蠊相似率为51％,三者在Per a 2与不同物种的同源序列构建的分子进化树中聚成一簇。结论：通过对Per a 2的生物信息学分析获得了该变应原分子特征．为进一步研究奠定基础。     

美洲大蠊Per a 9的抗原表位特征及三维结构建模

Per a 9是美洲大蠊主要过敏原蛋白之一。通过生物信息学方法了解美洲大蠊过敏原蛋白Per a 9的结构特征,为蟑螂变态反应性疾病的诊断和治疗提供线索。BLAST得到Per a 9相似序列,构建同源进化树,结果显示美洲大蠊Per a 9与德国小蠊精氨酸激酶在进化上具有较近的亲缘关系。Per a 9主要为α＋β结构的亲水性蛋白,其主要抗原表位集中于33—46、55—74、89—117、123—135、199—217、235—243、251—266、286—354区域。Motif预测其具有1个鸟嘌呤磷酸转移酶活性位点,6个蛋白激酶C磷酸化位点,7个酪氨酸激酶II磷酸化位点和2个N豆蔻酰化位点。其预测的三维结构基本能反应Per a 9真实的空间构象,这将为今后进一步了解和掌握Per a 9结构和功能的关系打下理论基础。     

美洲大蠊变应原Cr PI的表达、纯化与免疫学特性鉴定

以阳性噬菌体克隆为模板,通过PCR扩增出目的基因片段并克隆入T载体,经测序证实为美洲大 蠊Periplaneta americana变应原Cr PI后,将该基因亚克隆入表达载体pGEX-5X-1。美洲 大蠊变应原Cr PI在大肠杆菌中得到高效表达,但主要以包涵体形式存在于沉淀中。目的蛋白溶 于6 mol/L盐酸胍并经稀释复性后,经Glutathione Sepharose^TM4B亲和层析,纯度达 90%以上。以蟑螂过敏病人血清进行免疫印迹检测,结果显示重组变应原具有良好的IgE结合活 性。     

美洲大蠊主要变应原蛋白的质谱鉴定与分析

为了建立美洲大蠊Periplaneta americana变应原蛋白的质谱鉴定方法,我们将美洲大蠊粗浸液通过DEAE-52离子交换层析、Sephacryl S-200凝胶过滤层析等分离步骤得到纯化的74 kD蛋白,对纯化前后的该74 kD蛋白分别进行SDS-PAGE及凝胶内胰酶酶切,再经液相色谱-电喷雾-串联质谱（HPLC-ESI-MS/MS）在线联机分析,所得质谱数据进入网站（http://www.matrixscience.com）进行Mascot检索比对。通过对两者质谱鉴定结果的比较来评估美洲大蠊天然主要变应原蛋白的纯化效果。结果表明,纯化蛋白经HPLC-ESI-MS/MS鉴定是美洲大蠊主要变应原蛋白;离子交换层析等纯化步骤可以去除同一分子量的杂蛋白(如卵黄原蛋白),从而获得较好的鉴定结果。我们首次成功地运用质谱建立起变应原蛋白的新鉴定方法。     

美洲大蠊3-磷酸甘油醛脱氢酶基因的克隆及表达

旨在通过5’-RACE获得美洲大蠊3-磷酸甘油醛脱氢酶(GAPDH)基因的全长cDNA序列,进行生物信息学分析,构建原核表达载体,诱导重组蛋白表达,为进一步研究其功能奠定基础.通过3’-RACE技术,PCR扩增获取编码美洲大蠊GAPDH蛋白的全长cDNA序列;采用生物信息学方法推导出该序列编码的氨基酸序列及其理化性质;预测信号肽、蛋白疏水性、可溶性、跨膜区结构、二级结构、三级结构,并构建系统发育树;构建原核表达载体pET28a-GAPDH,IPTG诱导重组蛋白表达,并用Histag抗体Western blotting验证.结果显示,美洲大蠊GAPDH基因,其完整阅读框含999个碱基,编码332个氨基酸.序列分析显示,该蛋白与家蚕GAPDH相似性为89％,具有GAPDH保守功能域,经IPTG诱导获得重组蛋白.     

美洲大蠊变应原Pera2的生物信息学分析

目的:了解美洲大蠊变应原Per a 2的分子生物学特征。方法:从Genbank中获得Per a 2的核酸序列,用ExPaSy、EBI和NCBI网站的在线软件推导出编码氨基酸序列及其理化性质、空间结构、功能位点,并在Blastp比对后选择不同物种同源序列计算相似率、构建分子进化树。结果:Pera2由351个氨基酸细戍,分子量为38119Da、等电点为4.90、分子式为C1217H1825N285O297S18,为细胞外疏水性蛋白、属于肽酶a家族,信号肽位于1～20氨基酸处,三个跨膜螺旋区域依次位于1～19aa、51～78aa、282～300aa处;二级结构由α-螺旋(9.4%)、β延伸(28.49%)、随机线圈(62.11%)组成;美洲大蠊和德国小蠊相似率为55%、与马德拉蜚蠊相似率为51%,三者在Pera2与不同物种的同源序列构建的分子进化树中聚成一簇。结论:通过对Per a 2的生物信息学分析获得了该变应原分子特征,为进一步研究奠定基础。     

美洲大蠊新基因Parcxpwxxq01的分析及功能预测

为进一步研究已发现的美洲大蠊新基因Parcxpwxxq01,我们采用BLASTp,ORF Finder,ProtScale,ScanProsite和Tmpred Server等软件或数据库进行相似性比较、开放读码框预测和编码蛋白质的功能等生物信息学方法对该序列进行特征分析和功能预测,以获得该基因及其编码的蛋白质的更多功能提示。结果发现得到的Parcxpwxxq01序列是该基因的全长序列,该基因编码的蛋白质是一碱性跨膜蛋白,该蛋白质可能为美洲大蠊的药用有效成分,有进一步研究的价值。     

美洲大蠊胸腺素THY3的表达模式分析

美洲大蠊Periplaneta americana胸腺素基因具有THY1、THY2和THY3三个不同剪接体,其中THY3结构域最多。本研究使用实时荧光定量PCR技术比较分析了THY3在美洲大蠊不同性别、不同发育阶段及不同组织中的表达差异,以及大肠杆菌Escherichia coli诱导对美洲大蠊血淋巴和脂肪体中THY3表达的影响。结果表明:THY3在成虫期的表达量显著高于其他虫期,雌虫表达量显著高于雄虫,脂肪体表达量显著高于血淋巴、头部、肌肉、体壁组织。雌性成虫体腔注射大肠杆菌3 h后血淋巴中THY3表达量显著增高,而在脂肪体中12 h后才检测到THY3表达明显上调,研究结果为进一步研究美洲大蠊胸腺素的功能打下了基础。     

美洲大蠊microRNA的初步研究

美洲大蠊Periplaneta americana是一种世界性的卫生害虫,但其提取物有较高的药用价值。本研究对饲养的雌雄美洲大蠊成虫进行microRNA测序,分别在雄性和雌性中得到12 155 616条和9 847 263条序列。序列长度主要为18～23 nt,且在22 nt和29 nt处有2个峰值。将所得序列与数据库(NCBI、Rfam)进行比对注释,最终在雄性成虫中鉴定到57种已知的microRNA和152种潜在的新microRNA,在雌性成虫中鉴定到53种已知的microRNA和94种潜在的新microRNA。差异表达分析发现只有一种microRNA:miR-750在雌雄之间差异表达,其在雌虫中表达量显著高于雄虫。本研究首次在基因组水平研究了美洲大蠊microRNA的组成并对其功能进行了预测,为其后续研究奠定了基础。     

红星梭子蟹变应原原肌球蛋白基因的克隆、表达及其免疫学鉴定

克隆、表达红星梭子蟹蟹肉中变应原原肌球蛋白（Tropomyosin）,并对其免疫学特性进行鉴定。RT-PCR克隆红星梭子蟹（Portunus sanguinolentus）蟹肉中变应原原肌球蛋白的全长基因,根据序列设计带有酶切位点的特异性引物,扩增蟹Tropomyosin的完整开放阅读框,与pET-28a载体连接并转化大肠杆菌Escherichia. coli BL21(DE3),诱导表达后,Ni2+亲和层析柱纯化重组蛋白,Western-blot检测其免疫学活性,胰酶消化后进行MALDI-TOF-MS质谱分析鉴定。克隆所得蟹Tropomyosin基因包括一个编码285个氨基酸的开放阅读框。序列分析结果显示所克隆得到的基因与已知虾、螨、蟑螂等的Tropomyosin变应原基因有较高的同源性（>80%）。根据变应原的命名规则,将其命名为Pors 1,并提交GenBank数据库,登录号为EF143836。重组蟹Tropomyosin在大肠杆菌中能高效的表达,表达产物经Ni2+亲和层析柱纯化后进行Western-blot检测,结果显示该重组蛋白具有良好的免疫学活性,MALDI-TOF-MS质谱分析进一步证实了该重组变应原的正确性。本研究成功克隆和表达了红星梭子蟹变应原Tropomyosin,为蟹过敏性疾病的诊断和治疗奠定了基础。     

美洲大蠊粪便粗提物的聚集活性

用不同溶剂不同方法提取美洲大蠊Periplaneta americana(L.)粪便,测定美洲大蠊各虫态的诱集活性。结果表明,采用直接浸泡提取方法,丙酮、乙醇、正己烷和二氯甲烷4种粗提物对美洲大蠊各虫态都具有明显的诱集作用,其中乙醇和丙酮粗提物的引诱效果最好,正己烷次之,二氯甲烷最弱。4种溶剂粗提物对美洲大蠊雄成虫和高龄若虫聚集活性最强,对低龄若虫聚集活性最弱。用乙醇溶剂对粪便粗提,3种提取方法均对美洲大蠊有很强的诱集效果,其中索氏抽提诱集效果最弱,直接浸泡和超声波提取效果好,且差异不显著,但直接浸泡提取效果更好。     

蛋白质组学揭示美洲大蠊卵鞘在胚胎发育中的重要功能

作为世界性的卫生害虫,美洲大蠊Periplaneta americana对环境有惊人的适应性和极强的繁殖力,其强大的繁殖能力以及卵鞘对胚胎发育的有效保护,是其防治困难的内在原因.本研究以美洲大蠊卵鞘为研究对象,利用Label-free定量技术提取前期和中期的美洲大蠊卵鞘蛋白,检验合格后的蛋白溶液通过酶解,液质联用检测技...     

Characterization of tactile-sensitive interneurons in the abdominal ganglia of the cockroach,Periplaneta americana

Tactile stimulation of an insect's abdomen evokes various behaviors including grooming and vigorous escape responses. We tested a sample of 37 tactile-sensitive abdominal interneurons for various morphological and physiological characteristics, including their ability to excite thoracic interneurons that are known to integrate wind information conducted by giant interneurons in the classical escape response. The results suggest that abdominal tactile-sensitive interneurons are heterogeneous both in anatomical and physiological properties. In general, these cells are very small interganglionic interneurons that respond to tactile stimulation at more than one abdominal segment. However, the larger population contained virtually all types of cells. Some projected anteriorly, others posteriorly, and still others projected in both directions. For most cells, the soma was on the side opposite to their axons, but in 24% of the cells it was on the same side. Patterns of dendritic arbors also varied among cells. However, tactile sensitivity was in general consistent with the morphological bias noted in dendritic branch patterns. We were able to document the existence of tactile abdominal interneurons that connect directly to thoracic interneurons involved in escape (TI_As). However, instances of demonstrated connectivity were rare. One cell that did show connectivity (AI652) was characterized in detail, and its properties were appropriate for conducting tactile signals in a directional escape system. The dendritic arbors were biased to the side that was ipsilateral to the cell's soma and axon. As a result, this cell's abdominal inputs and thoracic outputs are on the same side. This pattern is appropriate for generating the sensory fields recorded previously in TI_As. Its axon was located in the ventral median tract, which should bring it close to the integrating region of the TI_As. © 1998 John Wiley & Sons, Inc. J Neurobiol 34: 227–241, 1998     

Molecular evidence for two vitellogenin genes and processing of vitellogenins in the American cockroach, Periplaneta americana

The American cockroach, Periplaneta americana has two vitellins (Vn1 and Vn2) and corresponding vitellogenins (Vg1 and Vg2). Vns/Vgs were separated on the SDS-PAGE as three major polypeptide bands [170, 100 (multisubunits), and 50 kD] and a minor polypeptide band (150 kD) both in the egg (mature terminal oocyte) extract and in the female hemolymph. We previously cloned one Vg (Vg1) cDNA and showed that the 170-kD polypeptide originated from the C-terminus of the Vg1. In the present study, we cloned the other Vg (Vg2) cDNA. It is 5,826 bp long encoding 1,876 amino acid residues (including 16 residues for putative signal peptide) in a single ORF. The deduced amino acid sequences of both Vgs (Vg1 and Vg2) of P. americana showed 30% identity. The GL/ICG motif is followed by eight cysteine residues at conserved locations near the C-terminal and the DGXR motif starts 18 residues upstream of the GL/ICG motif. The chemically determined N-terminal amino acid sequences of the 150-kD and of the 50-kD polypeptides matched exactly with each other and with the deduced N-terminal amino acid sequence of the Vg2 cDNA. The pattern of processing in P. americana Vns/Vgs is discussed.     

Response of thoracic interneurons to tactile stimulation in the cockroach,Periplaneta americana

Receåfindings indicate that cockroaches escape in response to tactile stimulation as well as they do in response to the classic wind puff stimulus. The thoracic interneurons that receive inputs from ventral giant interneurons also respond to tactile stimulation and therefore, represent a potential site of convergence between wind and tactile stimulation as well as other sensory modalities. In this article, we characterize the tactile response of these interneurons, which are referred to as type-A thoracic interneurons (TI_As). In response to tactile stimulation of the body cuticle, TI_As typically respond with a short latency biphasic depolarization which often passes threshold for action potentials. The biphasic response is not typical of responses to wind stimulation nor of tactile stimulation of the antennae. It is also not seen in tactile responses of thoracic interneurons that are not part of the TI_A group. The responses of individual TI_As to stimulation of various body locations were mapped. The left-right directional properties of TI_As are consistent with their responses to wind puffs from various different directions. Cells that respond equally well to wind from the left and right side also respond equally well to tactile stimuli on the left and right side of the animal's body. In contrast, cells that are biased to wind on one side are also biased to tactile stimulation on the same side. In general, tactile responses directed at body cuticle are phasic rather than tonic, occurring both when the tactile stimulator is depressed and released. The response reflects stimulus strength and follows repeated stimulation quite well. However, the first phase of the biphasic response is more robust during high-frequency stimulation than the second phase. TI_As also respond to antennal stimulation. However, here the response characteristics are complicated by the fact that movement of either antenna evokes descending activity in both left and right thoracic connectives. The data suggest that the TI_As make up a multimodal site of sensory convergence that is capable of generating an oriental escape turn in response to any one of several sensory cues. 1994 John Wiley & Sons, Inc.     

Purification and functional characterization of lectin with phenoloxidase activity from the hemolymph of cockroach,Periplaneta americana

Lectins also identified as hemagglutinins are multivalent proteins and on account of their fine sugar‐binding specificity play an important role in immune system of invertebrates. The present study was carried out on the hemolymph lectin of cockroach, Periplaneta americana with appropriate screening and purification to understand its molecular as well as functional nature. The lectin from the hemolymph was purified using ion‐exchange chromatography. The approximate molecular weight of purified lectin was 340 kDa as determined by FPLC analysis. Rabbit erythrocytes were highly agglutinated with purified lectin from the hemolymph of P. americana. The hemagglutination activity (HA) of lectin was specifically inhibited by fucose. Glycoproteins also inhibited the HA activity of lectin. The amino acid sequences of the purified lectin revealed homology with amino acid sequences of allergen proteins from P. americana. Purified lectin showed the highest phenoloxidase activity against dopamine. The activators such as exogenous proteases and LPS from Escherichia coli and Salmonella minnesota significantly enhanced the PO activity of the purified lectin. Besides, the presence of copper and hemocyanin conserved domain in the purified lectin provided a new facet that insects belonging to the ancient clade such as cockroaches retained some traces of evolutionary resemblance in possessing lectin of ancient origin.     

Behavioural changes are related to moult regulation in the cockroach, Periplaneta americana

Abstract. Larval holometabolous insects show changes in behaviour (e.g. start of wandering and spinning) in specific periods of the moulting cycle in relation to definite ratios of juvenile hormone and moulting hormone (ecdysone). In hemimetabolous insects no such changes in behaviour are known. It should be investigated whether the cockroach Periplaneta americana shows changes in locomotor activity and in food and water consumption in relation to periods of ecdysone production during the last larval stage. Within a mean duration of the last larval stage of 30 days there were two periods of reduced locomotor activity: on day 9 and between days 13 and 17. From days 12–13 food consumption decreased by c . 40% up to the day 18. Water consumption decreased between days 9 and 18 by about 55%. Peaks of ecdysone production appeared after these changes of behaviour in each case. Therefore in larval Periplaneta ecdysone seems not to trigger these behavioural changes.