DNA与其靶向分子相互作用研究进展

DNA与其靶向分子相互作用的研究不仅对阐述一些抗肿瘤、抗病毒药物及致癌物的作用机理,而且对进一步指导人工核酸酶的合成及DNA高级结构研究等方面的工作都具有重要意义.本文着重评述了近年来不同结构类型的DNA靶向分子与DNA相互作用研究方面的进展.     

硫堇与DNA分子相互作用的电化学方法研究

采用交流阻抗技术和循环伏安法 ,研究了在硫堇自组装膜修饰金电极上 ,以及在硫堇或DNA吸附修饰的玻碳电极上 ,硫堇与DNA分子的相互作用;硫堇自组装膜修饰金电极与DNA分子作用后 ,阻抗增大 ,表明它们之间发生了作用 ;吸附在玻碳电极上的硫堇 (DNA)与DNA(硫堇 )作用后 ,峰电位和峰电流均发生了变化 ,结合光谱测定结果 ,表明硫堇与DNA分子间存在着嵌插、静电等作用 ,二者作用的反应速度与分子在电极上固定的位置有关;在PBS缓冲液中硫堇 -DNA的表观结合常数为4.9×104L·mol -1 ;交流阻抗技术和循环伏安法是研究小分子与DNA分子间相互作用的经济、快速、简便的方法     

尼古丁与DNA相互作用的电化学研究

用线性扫描伏安法、循环伏安法及光谱法研究了尼古丁与DNA在0.2 mol/LpH 6.0的H2C2O4缓冲溶液中的相互作用。研究结果显示,随着DNA的加入,尼古丁峰电流降低,峰电位正移,说明尼古丁是以嵌入形式与DNA结合,生成了一种结合比为2∶1的非电活性化合物,结合常数β为1.56×109。并用多种电化学方法求得了电极过程的动力学参数。     

烟酰胺与DNA相互作用的电化学研究

利用示差脉冲伏安法研究了烟酰胺(NA)与小牛胸腺DNA在pH 8.0条件下相互作用的电化学行为.双链DNA(dsDNA)或单链DNA(ssDNA)的存在导致NA的峰电流明显降低且峰电位负移,表明NA与DNA发生相互作用,生成了复合物,且其作用模式主要是静电模式,但NA与dsDNA的相互作用强于与ssDNA的相互作用,可用于识别dsDNA和ssDNA.通过dsDNA加入前后峰电流的变化,计算得出NA与dsDNA结合常数β=4.946×10(11),结合位点数m=3.此外,NA的峰电流Ip与DNA质量浓度在1～14mg/L的范围内呈线性关系,线性回归方程为Ip(10-5A)=-0.03451cDNA(mg/L)+1.7408,相关系数R为0.9998.该法具有良好的回收率和选择性,可用于样品中DNA的测定.     

咖啡酸与DNA相互作用的电化学研究

用电化学方法研究了咖啡酸与DNA的相互作用,考察了扫速对咖啡酸与DNA相互作用的影响。实验表明,DNA存在使咖啡酸氧化峰的电位正移,咖啡酸的氧化峰峰电流减小,咖啡酸在320 nm吸收光谱的吸收峰降低,呈减色效应,且出现两个等电吸收点,说明咖啡酸与DNA的相互作用以嵌插作用为主。双链DNA(dsDNA)与咖啡酸的结合能力大于单链DNA(ssDNA),结合比为1∶1,结合常数β为2.32×106。     

有机小分子硫堇与DNA相互作用的研究

用光谱电化学和电化学技术研究了硫堇和硫堇与DNA相互作用的电化学和光谱电化学性质，得出了硫堇作为有机小分子能插入DNA双螺旋结构内部的结论，求得了对应的动力学参数。DNA的加入量与硫堇峰电流的降低呈一次线性关系，可望用于DNA浓度检测。     

葛根素与DNA相互作用的光谱法研究

以中性红为光谱探针,采用荧光光谱和紫外-可见光谱法研究了葛根素与DNA的相互作用,考察了离子强度和I-离子浓度对葛根素与DNA作用的影响。结果表明,在生理条件下(pH 7.4),葛根素通过沟槽结合方式与DNA发生作用,DNA对葛根素荧光猝灭属于静态猝灭,测得其结合常数为4.81×104L/mol。     

抗坏血酸与DNA相互作用的电化学研究

脱氧核糖酸(DNA)贮存着生物体生命活动的所有信息,这些信息指导着细胞生长、分化、代谢、遗传和变异等重要的生命活动。DNA结构与功能的改变可引起细胞生物学行为的显著改变。DNA与抗癌药物相互作用的研究的报道较多[1,2],而与维生素类药物研究报道相对较少[3]。抗坏血酸(AA)即     

一种新型发光探针与DNA相互作用的研究

本文以稳态荧光光谱、紫外-可见吸收光谱、荧光偏振、热变性、阴离子猝灭等手段,研究了一种具有强电荷转移能力的化合物2,7-二[(N-乙基咔唑-3-基)丙烯-1-酮基]芴与DNA的相互作用。研究结果表明,2,7-二[(N-乙基咔唑-3-基)丙烯-1-酮基)芴与DNA的作用方式是混合模式,以嵌插作用为主,同时存在沟槽相互作用,其咔唑基团可能插入到DNA的碱基对之间,结合常数K为8 123.48mol/L,结合位点n为0.71。该发光探针灵敏度高,结合稳定。     

Spectroscopic Electrochemical Studies of Interaction Between Fuchsin Basic DNA

Visible spectroscopic and electrochemical methods were used to study the interactions between DNA and fuchsin basic(FB). FB has an irreversible electro-oxidation peak in 5 mmol/L Tris-HCl buffer solution at pH = 7.4 on a glassy carbon electrode(GCE). After adding certain concentration of dsDNA, the oxidation peak current of FB decreases, but the peak potential hardly changs. The visible absorption spectroscopic study shows that the binding mode of FB to dsDNA is intercalative binding and electrostatic binding when the ratio of the concentration of dsDNA to FB is smaller than 0. 2, and a new substance, which produces a new absorption peak, is obtained via a covalent binding between dsDNA and FB apart from intercalative binding and electrostatic binding when the ratio of the concentration of dsDNA to FB is larger than 0. 2. The visible absorption spectra varies no longer when the ratio of the concentration of dsDNA to FB is larger than 1.5. A mean binding ratio of dsDNA to FB was determined to be 1.4: 1,suggesting that two complexes FB-dsDNA and FB-2dsDNA be formed. The interaction between FB and ssDNA was only electrostatic binding. The more powerful interaction of FB with dsDNA than with ssDNA may be applied for the recognition of dsDNA and ssDNA, and in DNA biosensor as hybridization indicator.     

Spectroscopic and Electrochemical Studies of the Interaction Between Fuchsin Basic and DNA

Introduction DNAbiosensorsareacompletelynewtypeoftech nologicalconceptionsbyusingspecificaffinitybetween mattersinlivingbeingstodistinguishdirectlyand quicklysequence specificDNA[1].Withtherapidde velopmentofgeneticengineering,oneofthekeyissues needtobere…     

Studies on Interaction Between Gallocyanine and DNA

IntroductionConsiderable attention has been focused onnew DNA- binding and DNA- modifying agents fromnatural ones to wholly synthetic designs due totheir usage as probes of deciphering the structureand the function of nucleic acids and as potentialchemotherapeutic agents[1— 4] . The application ofthose molecules must be based on the preciseunderstanding of the structural details about thebinding of the agents with the target molecule,double- helical DNA. The interaction of smallmolecules …     

灯盏花素与DNA相互作用的电化学及吸收光谱研究

用电化学方法研究了灯盏花素与DNA的相互作用,考察了扫速对灯盏花素与DNA相互作用的影响,实验表明,DNA存在使灯盏花素氧化峰的电位正移,灯盏花素的氧化峰峰电流减小,灯盏花素335 nm吸收光谱的吸收峰降低,呈减色效应,且出现2个等电吸收点,说明灯盏花素与DNA的相互作用以嵌插作用为主。双链DNA(dsDNA)与灯盏花素的结合能力大于DNA(ssDNA),结合比为3:1,结合常数β为3.63×10¹³。     

Studies on the Interaction of Novel Organogermanium Sesquioxides with DNA

The affinity and mode of interaction of four novel organogermanium sesquioxides with calf thymus DNA(CT-DNA) and two synthetic oligonucleotides, d(AT)₂₂d(AT)₂₂ and d(GC)₂₂d(GC)₂₂, were investigated by a combination of absorption spectroscopy, DNA thermal denaturalization method, viscosity method, fluorometric technique, and competitive binding study with ethidium bromide(EB). The results show that the organogermanium compounds can interact with DNA by intercalation, the binding ability of the compounds to CT-DNA and the synthetic oligonucleotides was found to be modest(in comparison to the proven intercalators), with binding constants on the order of 10³―10⁵ L/mol, respectively. Generally, the binding of the organogermanium sesquioxides with naphthalene moiety to DNA is stronger than that of the compounds with anthraquinone moiety. And the compounds with anthraquinone moiety have preference for binding to AT-rich duplexes, whereas the compounds with naphthalene moiety have a little preference for binding to GC-rich duplexes. DNA may be the primary effect target.     

芦丁与DNA相互作用的电化学研究

研究了芦丁与 DNA在 p H 5.72条件下相互作用的电化学行为。 DNA的存在能导致芦丁氧化还原峰电流降低 ,峰电位基本不变。通过测定 DNA引入前后的一些电化学参数 ,推测芦丁与 DNA在该条件下结合生成了一种非电活性的超分子化合物。针对该类型体系 ,推导出了一系列的方程 ,求得该超分子化合物的组成为 1∶ 1 ,结合常数 β=2 .49× 1 0 5mol- 1·L。     

二价金属离子对平阳霉素与DNA作用的影响

二价金属离子对平阳霉素与ＤＮＡ作用的影响王自春，黄登宇，袁静明（山西大学分子科学研究所，太原，０３０００６）关键词二价金属离子，平阳霉素，ＤＮＡ平阳霉素（简称ＢＬＭ－Ａ５）是抗肿瘤抗生素博莱霉素的成分之一，其化学结构、理化性质和药理作用虽基本相同［１...     

Electrochemical and Spectroscopic Studies on the Interaction of Gallocyanine with DNA

The interaction of gallocyanine (GC) with double‐stranded DNA (dsDNA) in pH 3.5 Tris‐HCl buffer solution was investigated by electrochemical methods and spectrophotometric methods as well. In the potential scan range of ‐0.25 ? +0.18 V(vs. SCE), GC had a couple of well‐defined redox peaks at ‐0.022 V and ‐0.069 V on a cyclic voltammogram at the scan rate of 100.0 mV/s, respectively. After the addition of dsDNA into the GC solution, the redox‐peak currents decreased obviously and the peak potentials shifted positively. The results demonstrated that GC binding to DNA was caused by intercalation. Electrochemical parameters such as the electron number (n), the charge transfer coefficient (α) and the electrochemical reaction standard rate constant (k_s) were calculated and compared in the absence and presence of dsDNA. Almost unchanged values of the electrochemical parameters after adding dsDNA showed that non‐electroactive complexes were formed when GC interacted with DNA. The results indicated that the decrease of the redox‐peak currents was caused by the decrease of the free concentration of GC in the reaction solution. The binding constant and binding ratio were investigated by spectrophotometric methods. DNA concentration can be determined by the decrease of the peak current of GC. The linear range for dsDNA was in the range of 1.45 × 10^?7 ? 1.45 × 10^?6mol/Land 1.45 × 10^?6 ? 1.45 × 10^?5 mol/L, respectively with the linear regression equation as Δi_P (10^?7 A) = 0.037 + 0.018C (10^?7mol/L), and Δi_P (10^?7 A) = 0.25 + 0.041C (10^?6mol/L), respectively, and the detection limit (3σ) was 1.13 × 10^?7 mol/L.     

胰岛素分子相互作用能的计算

胰岛素分子间的相互作用是人们所关心的一个课题,它对探讨胰岛素及其类似物与受休的相互作用和它们在溶液中的行为有着重要的意义,本文在前文工作的基础上,计算了两个胰岛素分子在不同距离和不同取向时的相互作用能,并试图对上述问题的研究提供线索。 我们从胰岛素两聚体的晶体结构数据出发,找出两个单体分子相距最近的三对点,求其中点坐标,在过该三点的平面上作一条垂线,作为分子间平移和转动的参考轴,固