An in vivo automated shimming method taking into account shim current constraints

Many in vivo imaging techniques require magnetic field homogeneity in the volume of interest. Shim coils of the second and third order spherical harmonics have been used successfully to compensate for complicated field variations caused by the human anatomy itself. The available currents of these coils are invariably limited. In this note we demonstrate that these limits significantly affect the optimal shim condition. We propose an automated in vivo shimming method for arbitrary volumes of interest using 3-dimensional (3D) field maps. This method is a modification of previous works using least-squares criteria. The main difference is that a constrained optimization is performed in vivo under the current limits of the shim coils, which improved the field homogeneity significantly over simple truncations of the least-squares solutions. This shimming method was used with head scans of five normal volunteers on a 4.0 tesla scanner. A fast double-echo sequence was used to obtain field maps, and a new field uniformity measure was derived for this method. The field mapping sequence was tested against a standard single-echo Dixon sequence used by previous investigators, and the stability of the shimming method was tested by repeated studies on the same subject.     

Erratum

Dynamic shimming has been implemented in three pulse sequences on a commercial GE Signa 1.5-T imaging system. Multi-slice field maps are acquired before the imaging sequence, and linear shim terms and center frequencies are calculated for each slice. During the imaging scan, the linear shim terms and center frequency are set before each pulse sequence repetition according to the current slice. Acquisition of multi-slice field maps and calculation of shim terms and center frequency for each slice are accomplished in a matter of seconds. Pulse sequences require only minimal modification to add dynamic shimming capability. Results are shown for a fat saturation spin-echo sequence, a single-shot echo-planar gradient-recalled echo sequence, and a spiral acquisition gradient-recalled echo sequence. In all cases, dynamic shimming with shim currents and center frequency optimized for each slice is shown to give better results than constant shim currents and a single center frequency optimized for the entire volume of interest.     

Rapid, fully automatic, arbitrary-volume in vivo shimming

MR spectroscopy and many MR imaging methods benefit from a well-shimmed magnet. We have developed a pulse sequence which enables fast and accurate measurement of three-dimensional field maps in vivo, and a data analysis package that allows calculation of shim currents to optimally shim arbitrary selected volumes. A data link to the shim power supply allows automatic update of currents. No intervention by the operator is required. Typical in vivo shimming time is less than 5 min. Performance analysis, phantom, and in vivo results are presented.     

B(0) homogeneity throughout the monkey brain is strongly improved in the sphinx position as compared to the supine position

PURPOSE: To map B(0) distortions throughout the monkey brain in the two positions commonly used for NMR studies (the prone sphinx position and the supine position) in order to test the hypothesis that B(0) homogeneity in the sphinx position is significantly improved as compared to the supine position. MATERIALS AND METHODS: Three macaque monkeys were installed in the two positions in a 3T whole-body MR system without shim correction. B(0) maps were acquired using a 3D gradient double-echo sequence, and field dispersion throughout the brain was quantified. In addition, field maps and localized (1)H spectra were acquired after first-order shimming was performed. RESULTS: The field maps collected in the three animals were highly reproducible. B(0) dispersion throughout the brain was typically two to three times greater in the supine position than in the sphinx position. Although first-order shimming proved relatively more efficient in the supine position, B(0) dispersion still remained greater in the supine than in the sphinx position. These findings can be explained by the thickness of outer brain tissues. CONCLUSION: This work demonstrates that the sphinx position is highly favorable in terms of B(0) homogeneity. It should prove useful for NMR exploration of the monkey brain, particularly at high fields where B(0) inhomogeneity associated with susceptibility artifacts is increased.     

Dynamic shim updating (DSU) for multislice signal acquisition.

Dynamic shim updating (DSU) is a technique for achieving optimal magnetic field homogeneity over extended volumes by dynamically updating an optimal shim setting for each individual slice in a multislice acquisition protocol. Here the practical implementation of DSU using all first- and second-order shims is described. In particular, the hardware modifications and software requirements are demonstrated. Furthermore, the temporal effects of dynamically switching shim currents are investigated and a Z(2)-to-Z(0) compensation unit is described and implemented to counteract the temporal Z(0) variations following a change in the Z(2) shim current. The optimal shim settings for all slices are determined with a quantitative and user-independent, multislice phase-mapping sequence. The performance of DSU is evaluated from multislice phase maps and spectroscopic images acquired on rat brain in vivo. DSU improved the magnetic field homogeneity over all spatial slices, with a more pronounced effect on the slices positioned away from the magnet isocenter, thereby making the magnetic field homogeneity highly uniform over an extended volume.     

Fully automated shim mapping method for spectroscopic imaging of the mouse brain at 9.4 T.

For spectroscopic imaging studies of the mouse brain, it is critical to obtain optimal B(0) homogeneity over a large region of interest (ROI). In this paper, a fully automated shimming method for mouse brain at 9.4 T, based on B(0) mapping, is described. B(0) maps were obtained using a multislice gradient echo sequence with multiple phase evolution time delays with a novel unwrapping scheme. The unwrapping method allows phase maps with large bandwidths (+/-1 kHz) but with high resolution (0.3 Hz/ degrees ) to be acquired in a single acquisition, thereby minimizing the number of iterations required. The SD of the B(0) over the ROI (8 x 5 x 1 mm) was less than 10 Hz after shimming. Application of this method to the in vivo mouse brain allowed reproducible, high-quality spectroscopic data to be collected with 1-microl voxels.     

Multislice 1H MRSI of the human brain at 7 T using dynamic B0 and B1 shimming

Proton MR spectroscopic imaging of the human brain at ultra-high field (≥7 T) is challenging due to increased radio frequency power deposition, increased magnetic field B(0) inhomogeneity, and increased radio frequency magnetic field inhomogeneity. In addition, especially for multislice sequences, these effects directly inhibit the potential gains of higher magnetic field and can even cause a reduction in data quality. However, recent developments in dynamic B(0) magnetic field shimming and dynamic multitransmit radio frequency control allow for new acquisition strategies. Therefore, in this work, slice-by-slice B(0) and B(1) shimming was developed to optimize both B(0) magnetic field homogeneity and nutation angle over a large portion of the brain. Together with a low-power water and lipid suppression sequence and pulse-acquire spectroscopic imaging, a multislice MR spectroscopic imaging sequence is shown to be feasible at 7 T. This now allows for multislice metabolic imaging of the human brain with high sensitivity and high chemical shift resolution at ultra-high field.     

Dynamically shimmed multivoxel 1H magnetic resonance spectroscopy and multislice magnetic resonance spectroscopic imaging of the human brain

In vivo multivoxel Magnetic Resonance Spectroscopy (MRS) and multislice Magnetic Resonance Spectroscopic Imaging (MRSI) are extremely susceptible to poor homogeneity of the static magnetic field. Existing room-temperature (RT) shim technology can adequately optimize the B(0) homogeneity of local volumes, such as single voxels. However, the widespread global homogeneity required for in vivo spectral acquisitions from multiple volumes in the human brain cannot be attained with a single RT shim setting. Dynamic shim updating (DSU) allows for use of local RT shim B(0) homogeneity compensation capabilities in a global fashion. Here, by updating first- and second-order shims on a voxel- and slice-specific basis using a pre-emphasized DSU system, we present multivoxel MRS and multislice MRSI of the human brain. These results demonstrate that DSU can increase multivoxel MRS acquisition capabilities and significantly improve the quality of multislice MRSI data.     

Regularized higher-order in vivo shimming.

A regularized algorithm is presented for localized in vivo shimming. The technique uses first- (X,Y,Z), second- (Z(2), ZX, ZY, X(2)-Y(2), XY), and third-order (Z(3)) shim coils, and is robust when applied to arbitrarily-shaped, as well as off-center, regions of interest (ROIs). A single-shot spiral pulse sequence is used for rapid field map acquisition, and a least-squares calculation of the shim currents is performed to minimize the root-mean-square (RMS) value of the B(0) inhomogeneity over a user-selected ROI. The use of a singular value decomposition (SVD) in combination with a regularization algorithm significantly improves the numerical stability of the least-squares fitting procedure. The fully automated shimming package is implemented on a 3 T GE Signa system and its robust performance is demonstrated in phantom and in vivo studies.     

Nodal inhomogeneity mapping by localized excitation--the "NIMBLE" shimming technique for high-resolution in vivo NMR spectroscopy

A method (NIMBLE) for obtaining optimum B0 field homogeneity at voxels located away from the magnet isocenter for use in volume-selected NMR spectroscopy is described. Voxels may be shimmed using only first-order X, Y, and Z shims to produce three-dimensional shim current maps, thus avoiding shim coupling problems. NIMBLE shimming prior to volume selection ensures optimum spectral resolution and improves the efficiency and accuracy of the volume-selection experiment. The benefits of the technique are illustrated by a high-resolution volume-selected spectrum of human tibia marrow.     

Rapid in vivo proton shimming

A rapid and completely automated method of adjusting the magnetic field (B0) homogeneity for in vivo proton spectroscopy and imaging is described. B0 inhomogeneity maps are generated by a gradient-recalled echo pulse sequence in which the frequency dispersion is chosen to eliminate the effects of the fat/water chemical shift. Low-order shim values are derived by magnitude-weighted least-squares fits to the B0 maps and automatically applied as DC offsets to the X, Y, and Z gradient amplifiers. Imaging with chemical shift selective saturation is used as a measure of the efficacy of the technique. Results indicate that AUTOSHIM improves the overall homogeneity: however, local high-order field distortions which cannot be corrected by linear gradients are generated by certain air/tissue and bone/tissue morphology. In such cases a "Zoom SHIM" may be applied over a limited region of interest for local homogeneity improvement at the expense of other regions. It is suggested that such scans are a necessity for recording the homogeneity during clinical MR spectroscopy.     

Real-time autoshimming for echo planar timecourse imaging.

Head motion within an applied magnetic field alters the effective shim within the brain, causing geometric distortions in echo planar imaging (EPI). Even if subtle, change in shim can lead to artifactual signal changes in timecourse EPI acquisitions, which are typically performed for functional MRI (fMRI) or diffusion tensor imaging. Magnetic field maps acquired before and after head motions of clinically realistic magnitude indicate that motion-induced changes in magnetic field may cause translations exceeding 3 mm in the phase-encoding direction of the EPI images. The field maps also demonstrate a trend toward linear variations in shim changes as a function of position within the head, suggesting that a real-time, first-order correction may compensate for motion-induced changes in magnetic field. This article presents a navigator pulse sequence and processing method, termed a "shim NAV," for real-time detection of linear shim changes, and a shim-compensated EPI pulse sequence for dynamic correction of linear shim changes. In vivo and phantom experiments demonstrate the detection accuracy of shim NAVs in the presence of applied gradient shims. Phantom experiments demonstrate reduction of geometric distortion and image artifact using shim-compensated EPI in the presence of applied gradient shims. In vivo experiments with intentional interimage subject motion demonstrate improved alignment of timecourse EPI images when using the shim NAV-detected values to update the shim-compensated EPI acquisition in real time.     

Multicoil shimming of the mouse brain

MR imaging and spectroscopy allow the noninvasive measurement of brain function and physiology, but excellent magnetic field homogeneity is required for meaningful results. The homogenization of the magnetic field distribution in the mouse brain (i.e., shimming) is a difficult task due to complex susceptibility‐induced field distortions combined with the small size of the object. To date, the achievement of satisfactory whole brain shimming in the mouse remains a major challenge. The magnetic fields generated by a set of 48 circular coils (diameter 13 mm) that were arranged in a cylinder‐shaped pattern of 32 mm diameter and driven with individual dynamic current ranges of ±1 A are shown to be capable of substantially reducing the field distortions encountered in the mouse brain at 9.4 Tesla. Static multicoil shim fields allowed the reduction of the standard deviation of Larmor frequencies by 31% compared to second order spherical harmonics shimming and a 66% narrowing was achieved with the slice‐specific application of the multicoil shimming with a dynamic approach. For gradient echo imaging, multicoil shimming minimized shim‐related signal voids in the brain periphery and allowed overall signal gains of up to 51% compared to spherical harmonics shimming. Magn Reson Med, 2011. © 2011 Wiley‐Liss, Inc.     

A method to improve the BO homogeneity of the heart in vivo

A homogeneous static (B_o) magnetic field is required for many NMR experiments such as echo planar imaging, localized spectroscopy, and spiral scan imaging. Although semi-automated techniques have been described to improve the B_o field homogeneity, none has been applied to the in vivo heart. The acquisition of cardiac field maps is complicated by motion, blood flow, and chemical shift artifact from epicardial fat. To overcome these problems, an ungated three-dimensional (3D) chemical shift image (CSI) was collected to generate a time and motion-averaged B_o field map. B_o heterogeneity in the heart was minimized by using a previous algorithm that solves for the optimal shim coil currents for an input field map, using up to third-order current-bounded shims (1). The method improved the B_o homogeneity of the heart in all 11 normal volunteers studied. After application of the algorithm to the unshimmed cardiac field maps, the standard deviation of proton frequency decreased by 43%, the magnitude ¹H spectral linewidth decreased by 24%, and the peak-peak gradient decreased by 35%. Simulations of the high-order (second- and third-order) shims in B_o field correction of the heart show that high order shims are important, resulting for nearly half of the improvement in homogeneity for several subjects. The T₂* of the left ventricular anterior wall before and after field correction was determined at 4.0 Tesla. Finally, results show that cardiac shimming is of benefit in cardiac ³¹P NMR spectroscopy and cardiac echo planar imaging.     

Strategies for shimming the breast.

There is evidence in the literature indicating a significant static field inhomogeneity in the human breast. A nonhomogenous field results in line broadening and frequency shifts in MRS and can cause intensity loss and spatial errors in MRI. Thus, there is a clear rationale for determining the regional variations in the static field homogeneity in the breast and providing strategies to correct them. Herein, the nature and extent of the static magnetic field at 3 T were measured in central planes of the human breast using both phase maps and multivoxel MRS techniques. In addition, the effect of first- and high-order shimming and of spatial saturation pulses on the static field inhomogeneity was evaluated. Both the theoretical and the measured field were found to be primarily linear in nature, with a reduction of 300 Hz from the nipple to the chest wall. First-order shimming reduced this inhomogeneity by 65%. Interestingly, the combination of spatial saturation pulses and first-order shimming was more effective than high-order shim alone. Since many clinical scanners do not have either higher-order shim or automated higher shimming algorithms that work in the presence of fat, the suggested combination provides an effective means to correct inhomogeneities in the breast.     

A gradient scheme suitable for localized shimming and in vivo 1H/31P STEAM and ISIS NMR spectroscopy

A gradient scheme is presented which may be used for STEAM or ISIS localization. One application of the scheme is to perform single-shot STEAM shimming prior to data acquisition with STEAM and ISIS, using identical gradient amplitudes and durations. Using conventional STEAM to shim for ISIS can produce line-shape distortions induced by different eddy currents in the two sequences; with this gradient scheme the problem is minimized. Line-shape improvements of STEAM and ISIS localized data obtained after volume localized shimming with the proposed STEAM sequence are demonstrated. The localization performance of the STEAM and ISIS sequences are demonstrated on phantoms and in vivo for ¹H and ³¹P metabolites.     

Dynamic shim updating: A new approach towards optimized whole brain shimming

The static magnetic field within two widely spaced axial slices of the human brain was mapped in five subjects following global shimming. This revealed a first order field shift in the anterior-posterior direction between the cerebellum and cerebrum, which has implications for functional and spectro-scopic magnetic resonance imaging. A new method is described called dynamic shim updating (DSU) to compensate for these field differences whereby the shim correction fields are updated in real time during multislice data acquisition to match the current imaging or spectroscopy slice. A hardware unit is presented to demonstrate the method using the first order shim corrections, which can be updated virtually instantaneously between slice acquisitions to give optimal shimming of each slice. The efficiency of the approach is demonstrated using field mapping and high speed MR imaging (echo-planar imaging), which are sensitive to field inhomogeneity.     

Utilization of an intra-oral diamagnetic passive shim in functional MRI of the inferior frontal cortex.

Due to the presence of gross magnetic susceptibility artifacts, functional MRI (fMRI) has proved problematic in studies of the human inferior frontal cortex (IFC). There is a strong desire, therefore, to employ techniques that mitigate susceptibility artifacts in the IFC while preserving the imaging parameters of an fMRI study. It has been shown that the use of a single, strongly diamagnetic, intra-oral passive shim significantly improves the homogeneity of the static magnetic field (B(0)) and, as a result, alleviates the susceptibility artifacts within the IFC. In this study, practical issues regarding the use of an intra-oral passive shim are examined. We investigated B(0) instabilities within the IFC resulting from subject head motion in order to calculate the effects of an intra-oral passive shim on the temporal variance of an EPI time series. These studies show that the addition of an intra-oral passive shim improves both B(0) homogeneity and signal stability, and increases sensitivity to functional activation.     

On shimming approaches in 3T breast MRI

A comparative study is presented, analyzing quantitatively the impact of 15 shim strategies on the homogeneity of the main magnetic field over the three‐dimensional breast region in 3T MRI. The results obtained in 12 female volunteers, spanning a wide range of body and breast types, indicate that the inclusion of the back and heart in the shim region of interest leads to considerable decrease in field homogeneity, and needs to be avoided. Comparison between shim strategies using volumetric B₀ maps, covering the entire breast region, and 1–6 plane B₀ maps indicate only minimally reduced performance for the latter. Interestingly, however, no single shim strategy relying on a limited number of B₀ maps as input was found to work best in all volunteers. This was attributed to the limited capability of a small number of B₀ maps to capture the B₀ variability existent within breast. On the average, a rectangular shim region of interest, encompassing the breast region alone, worked best for the cohort studied here. Magn Reson Med, 2013. © 2012 Wiley Periodicals, Inc.     

Mitigation of susceptibility-induced signal loss in neuroimaging using localized shim coils.

Correction of magnetic field distortions is essential for obtaining accurate brain blood-oxygen-level-dependent functional magnetic resonance imaging (fMRI) activation maps. The present work introduces an active shimming method that utilizes the magnetic field generated by resistive shim coils placed in the mouth to locally homogenize the magnetic field in the inferior portion of the frontal lobe, where the field is most seriously distorted. The shimming field can be optimized in situ patient by patient for the region of interest of the scanner operator's choice. The method at 1.5 T is shown to be effective in reducing field inhomogeneity and in recovery of fMRI signal. For example, in a region of interest approximately of 149 cm3, a coil of simple geometry can reduce the root mean square of the magnetic field by more than 50% and the recovered signal increases the extent of activation detected in a breath-holding fMRI experiment.