Structures and stabilities of HPS2 isomers

The potential energy surface of HPS² system containing nine isomers and fifteen transition states is obtained at MP2/6-311++G(d, p) and QCISD(t)/6-311++G(3df, 2p)(single-point) levels. On the potential energy surface, the lowest-lying trans-HSPS(E1) is found to be thermodynamically the most stable isomer followed by cis-HSPS(E2) and HP(S)S(C_2v, E3) at 3.43 and 14.17 kJ/mol higher, respectively. The computed results show that species E1, E2, E3, stereo HP(S)S(C_s, E4) with PSS three-membered ring, isomers trans-HPSS(E5) and cis-HPSS(E6) which coexist with E4 are kinetically stable isomers. The products E6 and E5 in the reaction of HP with S² can be isomerized into higher kinetic stable isomer E4 with 65.75 and 71.73 kJ/mol reaction barrier height, respectively. The predicated results may correct the possible inaccurate conclusion in that the product was experimentally assigned as isomer cis-HPSS(E6).     

Structures and stabilities of HPO_2 isomers

The potential energy surface of HPO2 system including eight isomers and twelve transition states is predicated at MP2/6-311++G(d, p) and QCISD(t)/6-311++G(3df,2p)(single-point) levels of theory. On the potential energy surface, cis-HOPO(E1) is found to be thermodynamically and kinetically most stable isomer followed by trans-HOPO(E2) and HPO(O)(C2v, E3) at 10.99 and 48.36 kJ/mol higher, respectively. Based on the potential energy surface, only E1 and E3 are thermodynamically stable isomers, and should be experimentally observable. The products cis-HPOO(E5) and frans-HPOO(E6) in the first-step reaction of HP with O2 can isomerize into isomer E1 that has higher stability. The reaction of OH with PO will directly lead to the formation of isomer E1. The computed results are well consistent with the previous experimental studies.     

HAsS2异构体结构与稳定性

在MP2/6-311++G(d,p)和QCISD(t)/6-311++G(3df,2p)(单点)水平下计算得到9个异构体和10个过渡态的HAsS₂体系势能面.异构体cis-HSAsS(E1)的能量最低,其次是trans-HSAsS(E2)、具有AsSS三元环的立体HAs(S)S(C_{s,E3)和HAs(S)S(C2v,E4)结构的异构体,能量分别比cis-HSAsS高1.46,60.78和93.63kJ/mol.根据体系的势能面,异构体E1,E2,E3和E4具有一定的动力学稳定性.AsH和S2第一步反应产物将会异构化为具有较高动力学稳定性的异构体E3,而SH和AsS第一步反应产物将会异构化为E1.计算结果与HNO2,HNS2,HPO2,HPS2和HAsO2等价电子相同的分子的势能面进行了比较.}     

Structures and stabilities of HPO<Subscript>2</Subscript> isomers

The potential energy surface of HPO₂ system including eight isomers and twelve transition states is predicated at MP2/6-311++G(d, p) and QCISD(t)/6-311++G(3df,2p)(single-point) levels of theory. On the potential energy surface, cis-HOPO(E1) is found to be thermodynamically and kinetically most stable isomer followed by trans-HOPO(E2) and HPO(O)(C_2v, E3) at 10.99 and 48.36 kJ/mol higher, respectively. Based on the potential energy surface, only E1 and E3 are thermodynamically stable isomers, and should be experimentally observable. The products cis-HPOO(E5) and trans-HPOO(E6) in the first-step reaction of HP with O₂ can isomerize into isomer E1 that has higher stability. The reaction of OH with PO will directly lead to the formation of isomer E1. The computed results are well consistent with the previous experimental studies.     

HAsO~2异构体结构、相对稳定性与体系势能面

在MP2/6-311++G(d,p)和QCISD(T)/6-311++G(3df,2p)(单点)水平下计算得到了包括9个异构体和10个过滤态的HAsO~2体系势能面。在势能面上，异构体cis-HOAsO(E1)的能量是最低的，其次是trans-HOAsO(E2)和HAsO(O)(C~2~V,E3)，能量分别比cis-HOAsO高13.15和192.74kJ/mol。根据体系的势能面，异构体E1，E3及cis-HOOAs(E6),trans-HOOAs(E5)具有一定的动力学稳定性，在实验中应该可以观测到。AsH和O~2反应的第一步产物将会异构化为具有较高动力学稳定性的异构体E3；而OH和AsO反应可直接生成E1。计算结果与HPO~2,HPS~2,HNO~2,HNS~2等价电子相同的分子的势能面进行了比较。     

Molecular structure of the trans and cis isomers of metal-free phthalocyanine studied by gas-phase electron diffraction and high-level quantum chemical calculations: NH tautomerization and calculated vibrational frequencies

The molecular structure of the trans isomer of metal-free phthalocyanine (H2Pc) is determined using the gas electron diffraction (GED) method and high-level quantum chemical calculations. B3LYP calculations employing the basis sets 6-31G**, 6-311++G**, and cc-pVTZ give two tautomeric isomers for the inner H atoms, a trans isomer having D2h symmetry and a cis isomer having C2v symmetry. The trans isomer is calculated to be 41.6 (B3LYP/6-311++G**, zero-point corrected) and 37.3 kJ/mol (B3LYP/cc-pVTZ, not zero-point corrected) more stable than the cis isomer. However, Hartree-Fock (HF) calculations using different basis sets predict that cis is preferred and that trans does not exist as a stable form of the molecule. The equilibrium composition in the gas phase at 471 degrees C (the temperature of the GED experiment) calculated at the B3LYP/6-311++G** level is 99.8% trans and 0.2% cis. This is in very good agreement with the GED data, which indicate that the mole fraction of the cis isomer is close to zero. The transition states for two mechanisms of the NH tautomerization have been characterized. A concerted mechanism where the two H atoms move simultaneously yields a transition state of D2h symmetry and an energy barrier of 95.8 kJ/mol. A two-step mechanism where a trans isomer is converted to a cis isomer, which is converted into another trans isomer, proceeds via two transition states of C(s) symmetry and an energy barrier of 64.2 kJ/mol according to the B3LYP/6-311++G** calculation. The molecular geometry determined from GED is in very good agreement with the geometry obtained from the quantum chemical calculations. Vibrational frequencies, IR, and Raman intensities have been calculated using B3LYP/6-311++G**. These calculations indicate that the molecule is rather flexible with six vibrational frequencies in the range of 20-84 cm(-1) for the trans isomer. The cis isomer might be detected by infrared matrix spectroscopy since the N-H stretching frequencies are very different for the two isomers.     

Predicting Potential Stable Isomers on the Singlet Surface of the [H,P,C,S] System by the MP2 and QCISD(T) Methods

A detailed singlet potential energy surface of [H,P, C,S] system is investigated by means of the MP2 and QCISD(T) methods. Eight isomers are located on the potential energy surface, and at the final QCISD(T)/6-311++G (3df,2p)//MP2/6-311++G(d,p) level with zero-point energy correction, the chainlike isomer HPCS is found to be kinetically and thermodynamically the most stable species followed by the chainlike HSCP, planar three-membered ring HC(S)P, chainlike HCPS, and stereo three-membered ring HP(C)S, which are predicted to be also kinetically stable isomers and should be experimentally observable provided that accurate experimental conditions are available. The dissociation processes from the kinetically and thermodynamically most stable species HPCS to the low-lying molecular dissociation fragments are not more favorable in energy than the isomerization process from HPCS to HSCP. Therefore, the experimental observation for potential isomer HSCP with C ≡ P triple bond is possible by means of photoisomerization technology using HPCS as precursor.     

HPO3异构体结构与稳定性

使用密度泛函方法(B3LYP)和6-311 G(3df,3pd)基组计算得到了HPO3体系的9个异构体与11个过渡态,并用内禀反应坐标理论验证了异构体的异构化过程．结果表明,在HPO3体系中,只有热力学最稳定的平面型异构体HOFO2(E1),(cis,cis)构象的HOOPO(E3)和立体的具有Cs对称性的异构体HP(O)O2(E7)具有较高的动力学稳定性,理论预测结果与实验一致．另外2个立体的HOFO2连接方式的异构体(E2和E4)由于解离为HO(Ⅱ) OPO(^2A1)的解离能较低,因此不能稳定存在。     

A combined density functional theory and coupled cluster method investigation of the structural properties and stabilities of radical CH(2)CP and its isomers

The doublet potential energy surface of radical system [C(2), H(2), P] is investigated at the UB3LYP/6-311++G(d,p) and UCCSD(T)/6-311++G(2df,2p) (single-point) levels. Eight chainlike and three-membered ring structures are located as energy minima connected by 10 interconversion transition states. At the final UCCSD(T)/6-311++G(2df,2p)//UB3LYP/6-311++G(d,p) level with zero-point vibrational energy correction, species CH(2)CP is found to be thermodynamically the most stable isomer followed by HCCPH, H-cCPC-H, cPCC-H(H), H-cCCP-H, cis-CC(H)PH, trans-CC(H)PH, and CCPH(2) at 11.01, 12.57, 40.07, 43.63, 50.25, 56.82, and 65.36 kcal/mol, respectively. The computed results indicate that the chainlike isomers CH(2)CP and HCCPH and cyclic radical H-cCPC-H possess considerable kinetic stability at extra low pressures and temperatures. Interestingly, radical CCPH(2), whose energy is the highest in all predicted CH(2)CP isomers, can be also regarded as a kinetically stable species with the smallest isomerization barrier of 22.26 kcal/mol at extra low pressures and temperatures. Therefore, considering higher kinetic stability, in addition to the microwave spectroscopy characterized isomer CH(2)CP in previous experiments, the species HCCPH, H-cCPC-H, and CCPH(2) should be considered as excellent candidates for possible experimental observation. Furthermore, the structural nature of stable radical isomers is discussed based on bonding characteristics, single electron spin distribution, and comparison with their analogues.     

HSCCS自由基势能面的理论研究

在CCSD(T)/6-311G(d,f)//MP2/6-311G(d,f) ZPE水平下,计算得到含有8个异构体和11个过渡态的HSCCS自由基体系势能面,讨论了异构体的结构与稳定性及异构体之间的异构化过程.结果表明异构体m1的能量最低,除m1以外,异构体m2和m3的能量也比较低,在MP2水平上,过渡态TS1的能量比异构体m2仅高3.9kJ/mol,而在CCSD(T)水平上,TS1的能量比m2低14.6 kJ/mol,这说明异构体m2可以迅速转化为能量更低的m1.异构体m3的能量比异构体m1高49.99 kJ/mol,可以推断,在合适的实验条件下可以观测到异构体m1.     

Structures and Stability of HNS_2 Isomers

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HBO2异构体的结构和相对稳定性

用ab initio方法在MP2/6 311＋＋G(d,p)水平下优化得到了HBO2体系的若干异构体和过渡态，并在QCISD(t)/6 311＋＋G(3df,2p)//MP2/6 311＋＋G(d,p)水平下进行了单点能量校正.对计算结果的分析表明，无论是在热力学还是在动力学上，具有链状结构的HOBO异构体(E1)是势能面上最稳定的结构，并对E1的电子结构进行了分析；另一具有C2v对称性的HBO(O)结构的异构体(E2)的能量比E1高381.72 kJ•mol－1，由于E2处于一个较深的势垒中，因此是比较稳定的，可以推断，在适合的实验中应该可以观察到异构体E2.     

An Ab Initio Molecular Orbital Study of Valence Bond Isomers of Silabenzene and Phosphabenzene

Ab initio molecular orbital calculation at HF/6-31G*, HF/6-31G**, HF/6-311G**, HF/6-311++G**, RMP2-FC/6-31G*, and B3LYP/6-31G* levels of theory for geometry optimization and MP4(SDQ)/6-31G* for a single point total energy calculation are reported for silabenzene ( 7 ), phosphabenzene ( 8 ) and 16 valence bond isomers of silabenzene and phosphabenzene ( 9-24 ). The calculated energy difference (19.78 kcal mol m 1 ) between silabenzene and the most stable valence bond isomer of silabenzene (1-silabenzvalene, 9 ) is much smaller than the difference (73.60 kcal mol m 1 ) between benzene and benzvalene ( 2 ). The energy difference between phosphabenzene and the most stable valence bond isomer of phosphabenzene (1-phosphabenzvalene, 17 ) is calculated to be 43.29 kcal mol m 1 .     

HPOS体系异构体结构与稳定性

在MP2／6－311＋＋G(d,p)和QCISD（T）／6－311＋＋G（3df,2p)（单点）水 平下计算得到了HPOS体系势能面上18个异构体和25个过渡态及解离碎片等驻点，并 分析了这些异构体的结构及异构化过程，讨论了可能的解离方式。在得到的异构体 中，有8个异构体是动力学较稳定的，它们是dis-HOPS,trans-HOPS,trans-HSPO, cis-HSPO,HP(O)S(Cs),trans-HPSO,cis-HPSO和HP（O）S（C1）。这些异构体在实 验中应该可以观测到。理论研究表明，P与S原子较强的超价能力在降低异构体能量 ，提高异构体动力学稳定性方面起到了关键的作用。得到的计算结果与HPO2， HPS2，HNOS等价电子相同的体系进行了比较。     

高级量子化学从头计算法研究N2和H2O分子间相互作用

在MP2/6-311++G(3d,3p)电子相关校正水平上,对N₂和H₂O分子间可能存在的氢键复合物进行全自由度能量梯度优化,发现了一个接近于直线的弱氢键总能量极小结构(1),进一步在高级电子相关校正的MP4SDTQ和CCSD(T)水平,用6-311++G(3d,3p)基组加上(3s3p2d1f)键函数,用MP4和CCSD(T)计算的结构1的结合能分别为-5.061kJ/mol和-4.715kJ/mol.     

Structure and vibrational assignment of the enol form of 1,1,1-trifluoro-2,4-pentanedione

Molecular structure of 1,1,1-trifluoro-pentane-2,4-dione, known as trifluoro-acetylacetone (TFAA), has been investigated by means of Density Functional Theory (DFT) calculations and the results were compared with those of acetylacetone (AA) and hexafluoro-acetylacetone (HFAA). The harmonic vibrational frequencies of both stable cis-enol forms were calculated at B3LYP level of theory using 6-31G** and 6-311++G** basis sets. We also calculated the anharmonic frequencies at B3LYP/6-31G** level of theory for both stable cis-enol isomers. The calculated frequencies, Raman and IR intensities, and depolarization ratios were compared with the experimental results. The energy difference between the two stable cis-enol forms, calculated at B3LYP/6-311++G**, is only 5.89 kJ/mol. The observed vibrational frequencies and Raman and IR intensities are in excellent agreement with the corresponding values calculated for the most stable conformation, 2TFAA. According to the theoretical calculations, the hydrogen bond strength for the most stable conformer is 57 kJ/mol, about 9.5kJ/mol less than that of AA and about 14.5 kJ/mol more than that of HFAA. These hydrogen bond strengths are consistent with the frequency shifts for OH/OD stretching and OH/OD out-of-plane bending modes upon substitution of CH(3) groups with CF(3) groups. By comparing the vibrational spectra of both theoretical and experimental data, it was concluded that 2TFAA is the dominant isomer.     

The conversion among various B4C clusters: a density functional theoretical study

Geometry optimizations and vibration frequencies of B4C clusters were performed with Becke-3LYP method using 6-31G(d) basis set. We have found 14 stable isomers, and the most stable structure among them is the five-member ring containing two three-member boron rings. We also analyzed these stable isomers in detail, and the results show that the structures containing three-member boron rings are predominant in energy for B4C clusters. In terms of MO and NBO analysis, the three-centered bond and the pi-electron delocalization play an important role in stabilizing the planar five-member rings of these B4C clusters. Our calculations suggest that isomer4 can be converted into isomer7 with only an energy barrier of 0.31 kJ mol(-1) at the B3LYP/6-311G+(3df) level. Although the planar structures of the five-member rings (isomers12-14) can be converted with each other, the conversions of isomer14 to isomer13 and isomer13 to isomer12 have high-energy barriers of 70.99 and 68.51 kJ mol(-1) at the B3LYP/6-31G(d) level, respectively.     

NC2S+离子的结构和稳定性的理论研究

在密度泛函和从头算理论水平下计算了单重态的NC2S+离子的结构、能量、光谱以及稳定性. 在B3LYP/6-311G(d)水平下, 得到8个异构体, 它们由15个过渡态相连接. 在CCSD(T)/6-311+G(2df)//QCISD/6-311G(d)+ZPVE水平下, 得到能量最低的异构体是直线型的具有1Σ电子态的NCCS+(1)(0.0 kJ/mol), 其次是直线型的异构体CNCS+(2)(54.8 kJ/mol). 两个低能量的异构体1和2及另外一个高能量的直线型异构体CCNS+(3)(323.8 kJ/mol)都具有相当大的动力学稳定性, 这三个异构体在具备一定条件的实验室和星际条件下是可以进行观测的. 分析了这3个异构体的成键性质.     

Structures and stability of isomers of [Si,N,N,P] system

Recently, silicon- and nitrogen-containing small molecules, such as SiN, SiC, SiC2, and NP, which have been identified in interstellar medium[1—3] and well characterized for the formation, structures, spec-tra, and reactivity using theoretical and experimental methods[4—8], have attracted more attentions because of their potential importance in chemical kinetics, in-terstellar chemistry, astrophysics, and material science. The systems with three, four, and five atoms, for ex-ample, Si2N, …     

Quantum-chemical Study on the Structures and Properties of Uracil-BX3 （X = F, Cl） Complexes

1 INTRODUCTION The intermolecular interaction of bases in DNA or RNA is of immense interest and significance to che- mists and biologists alike. The interactions of these bases with metal cations, solvent molecules and other small molecules or ions would affect the struc- ture and biological properties or recognition process,which has been investigated widely[1～8]. Boron contained compounds are electron deficient com- pounds and have been extensively used as catalysts in chemical react…