番茄幼苗盐胁迫响应蛋白质组分析

采用营养液栽培,以盐敏感型番茄品种M82为试材,利用双向电泳(2-DE)研究盐胁迫处理下幼苗叶片蛋白质的表达谱,并采用基质辅助激光解析飞行时间串联质谱(MALDI-TOF/TOF-MS)技术进行差异蛋白质的分离及质谱鉴定。结果表明:(1)盐胁迫处理下,利用2-DE获得差异显著蛋白点20个,其中17个蛋白质点丰度上调表达,3个蛋白质点丰度下调表达。(2)通过质谱分析和蛋白质NCBInr数据库检索,共鉴定出19个差异蛋白,分别为果糖-二磷酸醛缩酶、S-腺苷甲硫氨酸合成酶、甘油醛-3-磷酸脱氢酶等及3个功能未知蛋白;这些鉴定出的差异蛋白质与能量代谢、光合作用、蛋白合成、氧化还原平衡等过程相关,暗示所分离鉴定的蛋白可能参与了番茄的盐胁迫响应,为进一步研究番茄抗逆机制奠定基础。     

NO参与玉米幼苗对盐胁迫的应答

以玉米幼苗为材料,研究盐胁迫下其內源NO含量、NR和NOS活性的变化;NOS专一性抑制剂L-NAME和NR非专一性抑制剂NaN3对玉米幼苗內源NO含量的影响;利用激光共聚焦显微技术观测盐胁迫下玉米幼苗根部NO含量的变化及其分布特点。结果表明,盐胁迫下玉米幼苗根尖和叶片中NO含量有猝发现象,NOS活性也随之显著提高,NR活性则显著降低;L-NAME或NaN3均可降低盐胁迫所引起的玉米幼苗NO水平的增加,L-NAME对NO含量的影响比NaN3更显著。推测,NO参与玉米幼苗对盐胁迫的应答,NOS途径是盐胁迫下玉米幼苗內源NO合成的主要途径。     

Proteomic Analysis of Rice Seedlings Under Cold Stress

Low temperature can greatly restrict the growth and development of rice. The rice seedlings show growth retardation, lamina wrap, and part of blade even died under the condition of low temperature. In order to get more information about cold stress responses in rice, two dimensional electrophoresis and bioinformatics analysis of mass spectrometry were used to preliminary survey the cold tolerance of cold sensitive line 9311 and cold resistance variety Fujisaka 5 under cold stress. Two dimensional electrophoresis maps of 9311 and Fujisaka 5 were established under cold treatment. With analysis of bioinformation, the proteins were found involve in many aspects of rice development. The largest category of proteins is functioning on metabolism. By comparing the proteins from the two varieties, it can be found that most proteins from 9311 were down-regulated and were up-regulated in Fujisaka 5. The results showed that the membrane composition and structure were damaged, metabolism changed dramatically and rice defense system was activated under the cold stimulation. Fifty-nine proteins related to the resistance of cold stress were identified in our study, and we have investigated and classified all of their biological functions. The importance of our study are providing some conduct for the research of rice resistant to cold stress, supporting auxiliary technique for rice varieties and widening the search field of cold tolerance in plants.     

Proteomic Analysis of the Response of Liangyoupeijiu （Super High-Yield Hybrid Rice） Seedlings to Cold Stress

Liangyoupeijiu is a super high-yield hybrid rice. Despite its advantages with respect to yield and grain quality, it is sensitive to cold, which keeps it from being widely cultivated. We subjected Liangyoupeijiu seedlings to 4 ℃ cold treatment, then extracted the leaf proteins. After 2-D gel electrophoresis separation and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry analysis, a series of differentially displayed proteins were identified. Some metabolism-associated proteins were found among the downregulated proteins, such as carbamoyl phosphate synthetase, transketolase 1, dihydrolipoamide dehydrogenase and glyceraldehyde 3-phosphate dehydrogenase. The upregulated proteins included both stress-resistance proteins such as nucleoside diphosphate kinase I and proteins that are negative for rice growth, such as FtsH-like protein, plastid fusion and/or translocation factor （Pftf） and actin. Our results indicate that cold may inhibit Liangyoupeijiu growth through decreasing metabolic activity and damaging cell structure.     

外源H2S影响黄瓜幼苗响应高盐胁迫的蛋白质组学分析

为了阐明外源H₂S对高盐胁迫下黄瓜蛋白质表达的影响,以盐敏感型黄瓜栽培种‘春夏秋王’为材料,通过双向电泳（2 DE）技术分离叶片总蛋白质,采用基质辅助激光解析飞行时间串联质谱（MALDI TOF/TOF MS）技术对差异表达蛋白质进行质谱鉴定,并利用NCBI及SwissProt数据库检索进行差异表达蛋白质功能注释和代谢通路分析。结果表明：(1) 共检测到约2 490个蛋白质,其中蛋白质表达差异在1.5倍以上且差异显著(P<0.05)的有45个,其中有24个蛋白质表达上调,21个蛋白质表达下调。(2) 成功鉴定蛋白质26个,这些蛋白质参与了光合作用（26.92%）、蛋白质代谢（23.08%）、能量与碳水化合物代谢（11.54%）、氨基酸生物合成（11.54%）、细胞结构相关蛋白（7.69%）、抗氧化作用（3.85%）、信号转导（3.85%）及未知功能蛋白（11.54%）。(3) GO注释表明差异表达的蛋白质分子功能主要以蛋白质结合与水解酶活性为主,生物学过程涉及应激反应、有机物代谢过程、胁迫响应和细胞分化等,细胞组成集中分布在细胞部分和一些胞内细胞器。KEGG代谢通路分析表明,差异表达蛋白质主要参与了肌动蛋白细胞骨架调控、细胞凋亡、碳代谢和光和调控等代谢途径。研究表明,外源H₂S诱导了高盐胁迫下黄瓜叶片蛋白质的差异表达,为后续探索外源H₂S对黄瓜的抗盐分子机制研究提供了理论依据。     

基于蛋白质组学对螺旋藻砷胁迫响应机制的研究

通过研究螺旋藻(Spirulina sp.)在砷离子胁迫下的蛋白质组变化,从蛋白质表达水平解释螺旋藻对砷离子胁迫的响应机理。螺旋藻经过不同浓度砷离子胁迫7 d后,提取蛋白质进行凝胶电泳,并对差异蛋白进行质谱分析。结果表明螺旋藻在2.0 ppm砷酸盐中暴露10 min光合放氧速率降低27.3%,培养24 h后细胞内的金属硫蛋白、叶绿素、类胡萝卜素及藻胆蛋白相对含量均明显降低。蛋白组学共鉴定出75个差异蛋白,其中26个显著上调,49个呈现下调。这些差异蛋白表明砷离子主要通过破坏螺旋藻光合色素蛋白,干扰电子传递过程,导致能量合成受损,使得依赖光合作用产生能量进行的跨膜运动、蛋白质合成等相关过程受到影响;同时,活性氧清除与防御相关蛋白呈现上调,螺旋藻细胞内抗氧化系统被激活。     

Proteomic Analysis of Trypanosoma cruzi Response to Ionizing Radiation Stress

Trypanosoma cruzi, the causative agent of Chagas disease, is extremely resistant to ionizing radiation, enduring up to 1.5 kGy of gamma rays. Ionizing radiation can damage the DNA molecule both directly, resulting in double-strand breaks, and indirectly, as a consequence of reactive oxygen species production. After a dose of 500 Gy of gamma rays, the parasite genome is fragmented, but the chromosomal bands are restored within 48 hours. Under such conditions, cell growth arrests for up to 120 hours and the parasites resume normal growth after this period. To better understand the parasite response to ionizing radiation, we analyzed the proteome of irradiated (4, 24, and 96 hours after irradiation) and non-irradiated T. cruzi using two-dimensional differential gel electrophoresis followed by mass spectrometry for protein identification. A total of 543 spots were found to be differentially expressed, from which 215 were identified. These identified protein spots represent different isoforms of only 53 proteins. We observed a tendency for overexpression of proteins with molecular weights below predicted, indicating that these may be processed, yielding shorter polypeptides. The presence of shorter protein isoforms after irradiation suggests the occurrence of post-translational modifications and/or processing in response to gamma radiation stress. Our results also indicate that active translation is essential for the recovery of parasites from ionizing radiation damage. This study therefore reveals the peculiar response of T. cruzi to ionizing radiation, raising questions about how this organism can change its protein expression to survive such a harmful stress.     

Proteomic Analysis of Salt Stress Responses in Rice Shoot

To gain a better understanding of the mechanism of rice (Oryza sativa L.) in response to salt stress, we performed a proteomics analysis of rice in response to 250 mM NaCl treatment using shoots of 3-day-old nascent seedlings. The changes of protein patterns were monitored with two-dimensional gel electrophoresis. Of 57 protein spots showing changes in abundance in response to salt stress, 52 were identified by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. The identified proteins were classified into eight functional categories. Several novel salt stress-responsive proteins, including protein synthesis inhibitor I, photosystem II stability/assembly factor HCF136, trigger factor-like protein and cycloartenol-C24-methyltransferase are upregulated upon salt stress. In order to figure out the different and similar molecular mechanism among salt and other stresses, regulation of some salt responsive proteins under other abiotic stress (cold and dehydration) and abscisic acid application was also analyzed. The possible molecular mechanism of rice seedlings in response to salinity and other stresses were discussed.     

小麦耐盐突变体盐胁迫下的蛋白质组分析

首次采用双向电泳的方法分析1％NaCl胁迫72h的一对小麦耐盐(RH8706-49)及敏盐突变体(H8706-34)的蛋白质组。经过MALDI-TOF分析和数据库检索发现两者在H^ -ATP酶β亚基、谷氨酰胺合成酶前体、OEC33和RuBP羧化酶小亚基等5个候选蛋白存在质或量的差异。这5种蛋白均为叶绿体蛋白,它们很可能在盐胁迫下对维持叶绿体及整个细胞的功能起到重要作用。     

外源GSH对盐胁迫下番茄幼苗生长及抗逆生理指标的影响

采用营养液栽培法,研究外源谷胱甘肽(GSH)对NaCl胁迫下番茄幼苗生长、根系活力、电解质渗透率和丙二醛(MDA)、脯氨酸(Pro)、可溶性糖含量以及超氧化物歧化酶(SOD)、过氧化物酶(POD)、过氧化氢酶(CAT)活性的影响,为利用外源物质减轻盐胁迫伤害提供理论依据。结果显示:(1)NaCl胁迫显著抑制了番茄幼苗的生长、根系活力和SOD、POD、CAT活性,提高了电解质渗透率及MDA、Pro、可溶性糖含量;(2)外源喷施GSH能够诱导NaCl胁迫下番茄幼苗叶片抗氧化酶SOD、POD、CAT活性上调,电解质渗透率及MDA含量下降,Pro和可溶性糖含量恢复至对照水平;(3)外源喷施还原型谷胱甘肽抑制剂(BSO)使NaCl胁迫下番茄幼苗的根系活力以及抗氧化酶SOD、POD、CAT活性下降,脯氨酸含量提高;(4)喷施GSH可诱导BSO和NaCl共处理番茄植株的根系活力、SOD、POD、CAT活性提高,MDA和Pro含量降低。研究表明,外源GSH可通过提高促进盐胁迫下番茄幼苗植株渗透调节能力及清除活性氧的酶促系统的防御能力、降低细胞膜脂过氧化程度、保护膜结构的完整性,从而有效缓解NaCl胁迫对番茄幼苗生长的抑制,提高其耐盐性。     

The Effect of Ventilation on in vitro Response of Seedlings of the Cultivated Tomato and its Wild Salt-tolerant Relative Lycopersicon pennellii to Salt Stress

Organs or plants grown in vitro do not always exhibit the same responses to salinity as the whole plant of same species grown ex vitro. The response to salinity (100 mM NaCl) of seedlings of the wild tomato species Lycopersicon pennellii acc. Atico (Lpa) and of the cultivated tomato L. esculentum cv. M82 (Lem), the former is known as salt tolerant and the second as relatively salt sensitive under ex vitro conditions, was compared under in vitro conditions with three different ventilation regimes. It was found that under salinity shoots of the wild species accumulated the same or even more dry biomass than the control (roots somewhat less) under all ventilation levels. Growth of shoots and roots of the cultivated species was inhibited under the same conditions especially under the high ventilation. Ventilation reduced some abnormalities of leaf development related to hyperhydricity and consequently ventilated leaves exhibited a more compounded structure, increased area, increased resistance to water loss and stomata functioning. Ventilation increased K⁺, Na⁺ and Cl⁻ accumulation in shoots of both tomato species. This was more pronounced under salinity and in Lpa. This work indicates that differences that characterize whole plants of these species in response to salinity under ex vitro conditions are exhibited also in whole plants grown in vitro under high ventilation. It is suggested that ventilation is needed to evaluate well the response of whole plants to salt stress applied in vitro.     

烟草幼苗响应弱光胁迫的转录组分析

为了研究烟草幼苗对弱光胁迫反应的分子机制,以'云烟87'为材料,构建全光照和弱光处理条件下大十字期烟苗cDNA文库,利用Illumina测序技术进行转录组测序,筛选差异表达基因.结果表明:借助RNA-seq技术共筛选到2 956个DEGs,其中弱光相对于全光照表达上调的DEGs有691个,表达下调的DEGs为2 265...     

蛋白质组学在细菌应激反应研究中的应用

当外部生存环境发生变化时,细菌会在短时间内发生应激反应。利用双向凝胶电泳技术结合生物质谱鉴定的方法对细菌蛋白表达谱变化进行研究,是细菌转录谱变化研究的深入和扩展,是细菌应激反应研究中的新热点。综述了蛋白质组学在细菌应激反应研究中的应用现状和存在问题。     

Proteomic Analysis of Seedling Roots of Two Maize Inbred Lines That Differ Significantly in the Salt Stress Response

Salinity is a major abiotic stress that limits plant productivity and quality throughout the world. Roots are the sites of salt uptake. To better understand salt stress responses in maize, we performed a comparative proteomic analysis of seedling roots from the salt-tolerant genotype F63 and the salt-sensitive genotype F35 under 160 mM NaCl treatment for 2 days. Under salinity conditions, the shoot fresh weight and relative water content were significantly higher in F63 than in F35, while the osmotic potential was significantly lower and the reduction of the K⁺/Na⁺ ratio was significantly less pronounced in F63 than in F35. Using an iTRAQ approach, twenty-eight proteins showed more than 2.0- fold changes in abundance and were regarded as salt-responsive proteins. Among them, twenty-two were specifically regulated in F63 but remained constant in F35. These proteins were mainly involved in signal processing, water conservation, protein synthesis and biotic cross-tolerance, and could be the major contributors to the tolerant genotype of F63. Functional analysis of a salt-responsive protein was performed in yeast as a case study to confirm the salt-related functions of detected proteins. Taken together, the results of this study may be helpful for further elucidating salt tolerance mechanisms in maize.     

The Comparatively Proteomic Analysis in Response to Cold Stress in Cassava Plantlets

Cassava (Manihot esculenta Crantz) is a tropical root crop and sensitive to low temperature. However, it is poorly to know how cassava can modify its metabolism and growth to adapt to cold stress. An investigation aimed at a better understanding of cold-tolerant mechanism of cassava plantlets was carried out with the approaches of physiology and proteomics in the present study. The principal component analysis of seven physiological characteristics showed that electrolyte leakage (EL), chlorophyll content, and malondialdehyde (MDA) may be the most important physiological indexes for determining cold-resistant abilities of cassava. The genome-wide proteomic analysis showed that 20 differential proteins had the same patterns in the apical expanded leaves of cassava SC8 and Col1046. They were mainly related to photosynthesis, carbon metabolism and energy metabolism, defense, protein synthesis, amino acid metabolism, signal transduction, structure, detoxifying and antioxidant, chaperones, and DNA-binding proteins, in which 40 % were related with photosynthesis. The remarkable variation in photosynthetic activity and expression level of peroxiredoxin is closely linked with expression levels of proteomic profiles. Moreover, analysis of differentially expressed proteins under cold stress is an important step toward further elucidation of mechanisms of cold stress resistance.     

短期盐胁迫下盐穗木的转录组分析

盐穗木（Halostachys caspica）是荒漠盐碱地广泛分布的盐生植物,具有极强的耐盐性。为揭示盐胁迫下盐穗木基因组层面的基因表达变化特性,通过对300和500mmol·L^-1 NaCl胁迫3h的盐穗木同化枝进行了转录组测序。有效序列组装共得到153298条平均长度为643bp的unigenes,进行GO和KEGG功能聚类,分别获得47个GO功能小类和118个KEGG通路。差异表达基因分析显示,短期低盐（300mmol·L^-1）响应基因有4432个,高盐（500mmol·L^-1）响应基因有2580个,两个胁迫的共差异基因有1245个,主要富集在细胞过程、代谢过程和响应刺激等类别中。从短期盐胁迫下盐穗木转录组筛选出渗透调节和活性氧清除的相关基因,大多为上调基因。说明盐穗木能够通过促进渗透调节和增强活性氧清除提高短期的盐胁迫适应能力。     

牛叠肚幼苗对盐碱胁迫的生理响应及其耐盐阈值

以盆栽牛叠肚组培苗为试材,比较研究了不同浓度中性盐(NaCl、Na2SO4)和碱性盐(NaHCO3、Na2CO3)胁迫对其生长和生理指标的影响。结果显示:(1)牛叠肚幼苗生长在碱性盐(NaHCO3、Na2CO3)处理下表现出"低促高抑"现象,而在中性盐(NaCl、Na2SO4)处理下均受到不同程度的抑制。(2)随着盐碱胁迫浓度的升高,牛叠肚叶片的相对电导率呈增加趋势,丙二醛(MDA)积累波动变化;Na2SO4和NaHCO3处理下二者之间的变化趋势相似,而NaCl和Na2CO3处理下二者之间变化趋势则不同。(3)牛叠肚叶片中超氧化物歧化酶(SOD)活性随胁迫浓度增加先升高后下降,而过氧化物酶(POD)活性呈先下降后升高趋势,说明牛叠肚主要通过SOD和POD的互补作用来降低氧化伤害。(4)以相对株高生长量下降50%为标准,求得牛叠肚幼苗对NaCl、Na2SO4、NaHCO3、Na2CO34种单盐的耐受阈值分别为85.18(0.50%,W/V)、40.77(0.58%,W/V)、171.00(1.44%,W/V)、114.20(1.21%,W/V)mmol·L-1。研究表明,各盐碱胁迫使牛叠肚幼苗的生长受到不同程度的抑制,但其在一定浓度范围内通过提高抗氧化酶(SOD、POD)活性来减轻盐碱伤害,维持植株的正常生理代谢;牛叠肚幼苗对碱性盐(NaHCO3、Na2CO3)的耐受能力强于中性盐(NaCl、Na2SO4)。     

Accumulation of myo -Inositol in Actinidia Seedlings Subjected to Salt Stress

Seedlings of kiwifruit (Actinidia deliciosa (A. Chev.) C. F.Liang et A. R. Ferguson vardeliciosa ) and A. arguta (Sieb.et Zucc.) Planch. ex Miq. grown in hydroponic nutrient solutionswith elevated salt (MgSO₄and KCl) concentrations showed visiblesigns of stress at salt concentrations of 50 m M and above.The polyol myo -inositol accumulated in leaf tissue when thesalt was added to 15 m M or more, with increases being similarin the two species. The increase in concentration of myo -inositolwas approximately linear with rising salt. At any given saltconcentration an increase in myo -inositol was linear with timefrom application of salt.myo -Inositol concentrations increasedwithin the first 24 h of salt treatment, and declined againas quickly once the stress was removed. Sucrose also increasedwith salt stress, accumulating only once plants showed physicalsigns of stress. Accumulation of myo -inositol was negativelycorrelated to fructose and glucose. Copyright 1999 Annals ofBotany Company Actinidia arguta, Actinidia deliciosa, kiwifruit, leaf tissue, myo -inositol, salt stress, sucrose.