Modelled spatial distribution of marine fish and projected modifications in the North Atlantic Ocean

The objectives of this work were to examine the past, current and potential influence of global climate change on the spatial distribution of some commercially exploited fish and to evaluate a recently proposed new ecological niche model (ENM) called nonparametric probabilistic ecological niche model (NPPEN). This new technique is based on a modified version of the test called Multiple Response Permutation Procedure (MRPP) using the generalized Mahalanobis distance. The technique was applied in the extratropical regions of the North Atlantic Ocean on eight commercially exploited fish species using three environmental parameters (sea surface temperature, bathymetry and sea surface salinity). The numerical procedure and the model allowed a better characterization of the niche (sensu Hutchinson) and an improved modelling of the spatial distribution of the species. Furthermore, the technique appeared to be robust to incomplete or bimodal training sets. Despite some potential limitations related to the choice of the climatic scenarios (A2 and B2), the type of physical model (ECHAM 4) and the absence of consideration of biotic interactions, modelled changes in species distribution explained some current observed shifts in dominance that occurred in the North Atlantic sector, and particularly in the North Sea. Although projected changes suggest a poleward movement of species, our results indicate that some species may not be able to track their climatic envelope and that climate change may have a prominent influence on fish distribution during this century. The phenomenon is likely to trigger locally major changes in the dominance of species with likely implications for socio‐economical systems. In this way, ENMs might provide a new management tool against which changes in the resource might be better anticipated.     

Climate change impact on seaweed meadow distribution in the North Atlantic rocky intertidal

The North-Atlantic has warmed faster than all other ocean basins and climate change scenarios predict sea surface temperature isotherms to shift up to 600 km northwards by the end of the 21st century. The pole-ward shift has already begun for many temperate seaweed species that are important intertidal foundation species. We asked the question: Where will climate change have the greatest impact on three foundational, macroalgal species that occur along North-Atlantic shores: Fucus serratus, Fucus vesiculosus, and Ascophyllum nodosum? To predict distributional changes of these key species under three IPCC (Intergovernmental Panel on Climate Change) climate change scenarios (A2, A1B, and B1) over the coming two centuries, we generated Ecological Niche Models with the program MAXENT. Model predictions suggest that these three species will shift northwards as an assemblage or “unit” and that phytogeographic changes will be most pronounced in the southern Arctic and the southern temperate provinces. Our models predict that Arctic shores in Canada, Greenland, and Spitsbergen will become suitable for all three species by 2100. Shores south of 45° North will become unsuitable for at least two of the three focal species on both the Northwest- and Northeast-Atlantic coasts by 2200. If these foundational species are unable to adapt to the rising temperatures, they will lose their centers of genetic diversity and their loss will trigger an unpredictable shift in the North-Atlantic intertidal ecosystem.     

Climate change and the future restructuring of Neotropical anuran biodiversity

Climate change is likely to impact multiple dimensions of biodiversity. Species range shifts are expected and may drive changes in the composition of species assemblages. In some regions, changes in climate may precipitate the loss of geographically restricted, niche specialists and facilitate their replacement by more widespread, niche generalists, leading to decreases in β-diversity and biotic homogenization. However, in other regions climate change may drive local extinctions and range contraction, leading to increases in β-diversity and biotic heterogenization. Regional topography should be a strong determinant of such changes as mountainous areas often are home to many geographically restricted species, whereas lowlands and plains are more often inhabited by widespread generalists. Climate warming, therefore, may simultaneously bring about opposite trends in β-diversity in mountainous highlands versus relatively flat lowlands. To test this hypothesis, we used species distribution modelling to map the present-day distributions of 2669 Neotropical anuran species, and then generated projections of their future distributions assuming future climate change scenarios. Using traditional metrics of β-diversity, we mapped shifts in biotic homogenization across the entire Neotropical region. We used generalized additive models to then evaluate how changes in β-diversity were associated with shifts in species richness, phylogenetic diversity and one measure of ecological generalism. Consistent with our hypothesis, we find increasing biotic homogenization in most highlands, associated with increased numbers of generalists and, to a lesser extent, losses of specialists, leading to an overall increase in alpha diversity, but lower mean phylogenetic diversity. In the lowlands, biotic heterogenization was more common, and primarily driven by local extinctions of generalists, leading to lower α-diversity, but higher mean phylogenetic diversity. Our results suggest that impacts of climate change on β-diversity are likely to vary regionally, but will generally lead to lower diversity, with increases in β-diversity offset by decreases in α-diversity.     

Range reshuffling: Climate change,invasive species,and the case of Nothofagus forests in Aotearoa New Zealand

Aim

The impact of climate change on forest biodiversity and ecosystem services will be partly determined by the relative fortunes of invasive and native forest trees under future conditions. Aotearoa New Zealand has high conservation value native forests and one of the world's worst invasive tree problems. We assess the relative effects of habitat redistribution on native Nothofagus and invasive conifer (Pinaceae) species in New Zealand as a case study on the compounding impacts of climate change and tree invasions.

Location

Aotearoa New Zealand.

Methods

We use species distribution models (SDMs) to predict the current and future distribution of habitat for five native Nothofagus species and 13 invasive conifer species under two 2070 climate scenarios. We calculate habitat loss/gain for all species and examine overlap between the invasive and native species now and in future.

Results

Most species will lose habitat overall. The native species saw large changes in the distribution of habitat with extensive losses in North Island and gains mostly in South Island. Concerningly, we found that most new habitat for Nothofagus was also suitable for at least one invasive species. However, there were refugia for the native species in the wetter parts of the climate space.

Main Conclusion

If the predicted changes in habitat distribution translate to shifts in forest distribution, it would cause widespread ecological disruption. We discuss how acclimation, adaptation and biotic interactions may prevent/delay some changes. But we also highlight that the poor establishment capacity of Nothofagus, and the contrasting ability of the conifers to invade, will present persistent conservation challenges in areas of both new habitat and forest retreat. Pinaceae are problematic invaders globally, and our results highlight that control of invasions and active native forest restoration will likely be key to managing forest biodiversity under future climates.     

Climate change and fishing: a century of shifting distribution in North Sea cod

Globally, spatial distributions of fish stocks are shifting but although the role of climate change in range shifts is increasingly appreciated, little remains known of the likely additional impact that high levels of fishing pressure might have on distribution. For North Sea cod, we show for the first time and in great spatial detail how the stock has shifted its distribution over the past 100 years. We digitized extensive historical fisheries data from paper charts in UK government archives and combined these with contemporary data to a time‐series spanning 1913–2012 (excluding both World Wars). New analysis of old data revealed that the current distribution pattern of cod – mostly in the deeper, northern‐ and north‐easternmost parts of the North Sea – is almost opposite to that during most of the Twentieth Century – mainly concentrated in the west, off England and Scotland. Statistical analysis revealed that the deepening, northward shift is likely attributable to warming; however, the eastward shift is best explained by fishing pressure, suggestive of significant depletion of the stock from its previous stronghold, off the coasts of England and Scotland. These spatial patterns were confirmed for the most recent 3½ decades by data from fisheries‐independent surveys, which go back to the 1970s. Our results demonstrate the fundamental importance of both climate change and fishing pressure for our understanding of changing distributions of commercially exploited fish.     

Climate‐driven range shifts explain the distribution of extant gene pools and predict future loss of unique lineages in a marine brown alga

The climate‐driven dynamics of species ranges is a critical research question in evolutionary ecology. We ask whether present intraspecific diversity is determined by the imprint of past climate. This is an ongoing debate requiring interdisciplinary examination of population genetic pools and persistence patterns across global ranges. Previously, contrasting inferences and predictions have resulted from distinct genomic coverage and/or geographical information. We aim to describe and explain the causes of geographical contrasts in genetic diversity and their consequences for the future baseline of the global genetic pool, by comparing present geographical distribution of genetic diversity and differentiation with predictive species distribution modelling (SDM) during past extremes, present time and future climate scenarios for a brown alga, Fucus vesiculosus. SDM showed that both atmospheric and oceanic variables shape the global distribution of intertidal species, revealing regions of persistence, extinction and expansion during glacial and postglacial periods. These explained the distribution and structure of present genetic diversity, consisting of differentiated genetic pools with maximal diversity in areas of long‐term persistence. Most of the present species range comprises postglacial expansion zones and, in contrast to highly dispersive marine organisms, expansions involved only local fronts, leaving distinct genetic pools at rear edges. Besides unravelling a complex phylogeographical history and showing congruence between genetic diversity and persistent distribution zones, supporting the hypothesis of niche conservatism, range shifts and loss of unique genetic diversity at the rear edge were predicted for future climate scenarios, impoverishing the global gene pool.     

Reproductive and recruitment dynamics of clionaid sponges on oyster reefs in North Carolina

Boring sponges belonging to the family Clionaidae have become a destructive nuisance to eastern oyster (Crassostrea virginica) aquaculture and restoration efforts in the southeastern USA. Clionaid sponges colonize the inner layers of oyster shells and remove carbonate material, compromising the quality and marketability of the oyster; however, relatively little is known about reproduction and recruitment of these sponges. Using histological techniques, reproductive activity of clionaid sponges was monitored at two sites (Cedar Island and Masonboro Sound) in coastal North Carolina. Sponge recruitment to limestone tiles (5×5 cm), oyster shells, and clam shells was monitored in 2013 and 2014; recruitment to the limestone tiles was statistically higher than recruitment to clam or oyster shells. Overall, seasonal patterns in reproduction and recruitment of clionaid sponges were generally similar at the two sites. Three species of clionaid sponge were found during field sampling (Cliona celata, C. lobata, and C. truitti), and reproductive activity (eggs and spermatocysts) of these species was observed from April to November, with peak reproduction occurring from June to September for C. lobata and from August to September for C. celata. Recruitment peaked in late summer/early fall. Additionally, the relationship between environmental conditions (temperature, salinity, dissolved oxygen, pH, and chlorophyll a) and clionaid recruitment was explored using a regression model. At Cedar Island, the best‐fit model included salinity and dissolved oxygen, while the best‐fit model at Masonboro Sound included temperature, pH, and salinity. The data from this study show that the primary reproduction and recruitment pulses occur in the fall for local clionaids, and thus mitigation strategies should be applied in the late fall or winter to minimize infestations.     

Cetacean range and climate in the eastern North Atlantic: future predictions and implications for conservation

There is increasing evidence that the distributions of a large number of species are shifting with global climate change as they track changing surface temperatures that define their thermal niche. Modelling efforts to predict species distributions under future climates have increased with concern about the overall impact of these distribution shifts on species ecology, and especially where barriers to dispersal exist. Here we apply a bio‐climatic envelope modelling technique to investigate the impacts of climate change on the geographic range of ten cetacean species in the eastern North Atlantic and to assess how such modelling can be used to inform conservation and management. The modelling process integrates elements of a species' habitat and thermal niche, and employs “hindcasting” of historical distribution changes in order to verify the accuracy of the modelled relationship between temperature and species range. If this ability is not verified, there is a risk that inappropriate or inaccurate models will be used to make future predictions of species distributions. Of the ten species investigated, we found that while the models for nine could successfully explain current spatial distribution, only four had a good ability to predict distribution changes over time in response to changes in water temperature. Applied to future climate scenarios, the four species‐specific models with good predictive abilities indicated range expansion in one species and range contraction in three others, including the potential loss of up to 80% of suitable white‐beaked dolphin habitat. Model predictions allow identification of affected areas and the likely time‐scales over which impacts will occur. Thus, this work provides important information on both our ability to predict how individual species will respond to future climate change and the applicability of predictive distribution models as a tool to help construct viable conservation and management strategies.     

Ecological niches as stable distributional constraints on mammal species, with implications for Pleistocene extinctions and climate change projections for biodiversity

Aim Theoretical work suggests that species’ ecological niches should remain relatively constant over long‐term ecological time periods, but empirical tests are few. We present longitudinal studies of 23 extant mammal species, modelling ecological niches and predicting geographical distributions reciprocally between the Last Glacial Maximum and present to test this evolutionary conservatism. Location This study covered distributional shifts in mammal species across the lower 48 states of the United States. Methods We used a machine‐learning tool for modelling species’ ecological niches, based on known occurrences and electronic maps summarizing ecological dimensions, to assess the ability of ecological niches as modelled in one time period to predict the geographical distribution of the species in another period, and vice versa. Results High intertemporal predictivity between niche models and species’ occurrences indicate that niche conservatism is widespread among the taxa studied, particularly when statistical power is considered as a reason for failure of reciprocal predictions. Niche projections to the present for 8 mammal taxa that became extinct at the end of the Pleistocene generally increased in area, and thus do not support the hypothesis of niche collapse as a major driving force in their extinction. Main conclusions Ecological niches represent long‐term stable constraints on the distributional potential of species; indeed, this study suggests that mammal species have tracked consistent climate profiles throughout the drastic climate change events that marked the end of the Pleistocene glaciations. Many current modelling efforts focusing on anticipating climate change effects on species’ potential geographical distributions will be bolstered by this result — in essence, the first longitudinal demonstration of niche conservatism.     

Unravelling the evolutionary history and future prospects of endemic species restricted to former glacial refugia

The contemporary distribution and genetic composition of biodiversity bear a signature of species’ evolutionary histories and the effects of past climatic oscillations. For many European species, the Mediterranean peninsulas of Iberia, Italy and the Balkans acted as glacial refugia and the source of range recolonization, and as a result, they contain disproportionately high levels of diversity. As these areas are particularly threatened by future climate change, it is important to understand how past climatic changes affected their biodiversity. We use an integrated approach, combining markers with different evolutionary rates and combining phylogenetic analysis with approximate Bayesian computation and species distribution modelling across temporal scales. We relate phylogeographic processes to patterns of genetic variation in Myotis escalerai, a bat species endemic to the Iberian Peninsula. We found a distinct population structure at the mitochondrial level with a strong geographic signature, indicating lineage divergence into separate glacial refugia within the Iberian refugium. However, microsatellite markers suggest higher levels of gene flow resulting in more limited structure at recent time frames. The evolutionary history of M. escalerai was shaped by the effects of climatic oscillations and changes in forest cover and composition, while its future is threatened by climatically induced range contractions and the role of ecological barriers due to competition interactions in restricting its distribution. This study warns that Mediterranean peninsulas, which provided refuge for European biodiversity during past glaciation events, may become a trap for limited dispersal and ecologically limited endemic species under future climate change, resulting in loss of entire lineages.     

Climate‐change refugia in the sheltered bays of Palau: analogs of future reefs

Coral bleaching and mortality are predicted to increase as climate change‐induced thermal‐stress events become more frequent. Although many studies document coral bleaching and mortality patterns, few studies have examined deviations from the expected positive relationships among thermal stress, coral bleaching, and coral mortality. This study examined the response of >30,000 coral colonies at 80 sites in Palau, during a regional thermal‐stress event in 2010. We sought to determine the spatial and taxonomic nature of bleaching and examine whether any habitats were comparatively resistant to thermal stress. Bleaching was most severe in the northwestern lagoon, in accordance with satellite‐derived maximum temperatures and anomalous temperatures above the long‐term averages. Pocillopora populations suffered the most extensive bleaching and the highest mortality. However, in the bays where temperatures were higher than elsewhere, bleaching and mortality were low. The coral‐community composition, constant exposure to high temperatures, and high vertical attenuation of light caused by naturally high suspended particulate matter buffered the corals in bays from the 2010 regional thermal‐stress event. Yet, nearshore reefs are also most vulnerable to land‐use change. Therefore, nearshore reefs should be given high conservation status because they provide refugia for coral populations as the oceans continue to warm.