New fluorogenic substrates for renin

A simple and sensitive fluorometric assay was developed to test renin activity within several hours. Two new fluorogenic peptides, Arg-Pro-Phe-His-Leu-Leu-Val-Tyr-4-methylcoumaryl-7-amide (octapeptide-MCA) and a succinyl derivative of the octapeptide-MCA were synthesized and used as a renin substrate. Renin cleaved the substrates at the Leu-Leu bond, releasing Leu-Val-Tyr-MCA. Three amino acids of this product were then successively split off by the auxiliary enzyme, leucine aminopeptidase, to liberate free 7-amino-4-methylcoumarin (AMC). The generation of the fluorescent 7-amino-4-methylcoumarin was proportional to renin concentrations up to 100 mGoldblatt U/tube. The optimal pH of renin reaction for both substrates was 6.5 to 7.0. As low as 5 mGoldblatt U of renin could be detected by this method. This method was applied to the assay of renin during its purification.     

Calcium binding by horseradish peroxidase C and the heme environmental structure

The hyperfine shifted proton NMR spectrum of isoenzyme c of horseradish peroxidase indicated that one calcium ion is essential to the enzyme in maintaining the protein structure in the heme vicinity.     

3-(p-hydroxyphenyl)propionic acid as a new fluorogenic reagent for amine oxidase assays

A detailed procedure of a new and extremely sensitive fluorometric assay for amine oxidases is presented. Hydrogen peroxide, produced by the oxidase reaction, reacted with 3-(p-hydroxyphenyl)propionic acid in the presence of peroxidase to yield a fluorescent compound by which enzyme activity could be determined. The enzyme reaction was terminated by NaOH solution, which increased the fluorescence intensity three- to fivefold. The detection limit thus obtained was as little as 0.02 nmol. The alkalinization also contributed to stopping the enzyme reaction and to the clarification of assay mixtures containing turbid enzyme preparations.     

Phosphorimetric assay for dopamine beta-hydroxylase in rat plasma

A sensitive phosphorimetric method for the assay of dopamine β-hydroxylase in rat plasma is described. Octopamine, formed enzymatically from the substrate tyramine, is separated by Dowex 50W-X4 column chromatography and oxidized with periodate to p-hydroxybenz-aldehyde. The aldehyde is extracted with ether and then determined phosphorimetrically in a mixture of ether and ethanolic potassium hydroxide. The assay requires as little as 40 μl of rat plasma for the test and the blank with the lower limit of detection for octopamine at 60 pmol.     

Rapid and sensitive determination of sphingosine bases and sphingolipids with fluorescamine

A rapid and sensitive method is described for determining sphingosine and sphingolipids in the 1–100 nanomole range. Sphingosine is released from the sphingolipids by hydrolysis with hydrochloric acid in aqueous methanol, and then reacted with fluorescamine at pH 8.0. The same fluorescence intensities were obtained with equimolar concentrations of sphingosine, psychosine, cerebroside, and sphingomyelin. A hexosamine-containing sphingolipid, ganglioside, gave about twice the expected fluorescence. This result is explained by the fact that hexosamines and other primary amines react with fluorescamine. However, the method was easily modified to determine sphingosine in gangliosides by extracting the hydrophobic base from the hydrolysis mixture with ether. The procedure should have broad application in the field of sphingolipid chemistry and biochemistry.     

Binding mode of indole to horseradish peroxidase

The binding of indole to both horseradish peroxidase and its cyanide complex can be detected by difference spectra in the Soret region. Indole and cyanide binding are not competitive processes. The effect of indole on the binding rate constants between horseradish peroxidase and cyanide and compound I formation reactions between horseradish peroxidase and hydrogen peroxide or m-chloroperbenzoic acid was studied by the stopped-flow method. In all cases the rate constants of the indole-peroxidase complex with the ligand or substrates were smaller than those of free peroxidase. Since the m-chloroperbenzoic acid reaction has been shown to approach a diffusion-controlled rate, the effect of indole binding on the rate constant for compound I formation using this peracid was analyzed semiquantitatively using theoretical equations for a diffusion-controlled rate process with a capture-window active site model. The effect of indole binding on the diffusion-controlled rate constant could be explained by a decrease in the radius of the capture-window active site.     

Production of superoxide radicals and hydrogen peroxide by NADH-ubiquinone reductase and ubiquinol-cytochrome c reductase from beef-heart mitochondria.

Complex I (NADH-ubiquinone reductase) and Complex III (ubiquinol-cytochrome c reductase) supplemented with NADH generated O₂^? at maximum rates of 9.8 and 6.5 nmol/min/mg of protein, respectively, while, in the presence of superoxide dismutase, the same systems generated H₂O₂ at maximum rates of 5.1 and 4.2 nmol/min/mg of protein, respectively. H₂O₂ was essentially produced by disproportionation of O₂^?, which constitutes the precursor of H₂O₂. The effectiveness of the generation of oxygen intermediates by Complex I in the absence of other specific electron acceptors was 0.95 mol of O₂^? and 0.63 mol of H₂O₂/mol of NADH. A reduced form of ubiquinone appeared to be responsible for the reduction of O₂ to O₂^?, since (a) ubiquinone constituted the sole common major component of Complexes I and III, (b) H₂O₂ generation by Complex I was inhibited by rotenone, and (c) supplementation of Complex I with exogenous ubiquinones increased the rate of H₂O₂ generation. The efficiency of added quinones as peroxide generators decreased in the order Q₁ > Q₀ > Q₂ > Q₆ = Q₁₀, in agreement with the quinone capacity of acting as electron acceptor for Complex I. In the supplemented systems, the exogenous quinone was reduced by Complex I and oxidized nonenzymatically by molecular oxygen. Additional evidence for the role of ubiquinone as peroxide generator is provided by the generation of O₂^? and H₂O₂ during autoxidation of quinols. In oxygenated buffers, ubiquinol (Q₀H₂), benzoquinol, duroquinol and menadiol generated O₂^? with k₃ values of 0.1 to 1.4 m^? · s^?1 and H₂O₂ with k₄ values of 0.009 to 4.3 m^?1 · s^?1.     

Fluorescent nucleotide triphosphate substrates for snake venom phosphodiesterase

The procedure described utilizes a crude cell-free extract from the yeast Saccharomyces cerevisiae as enzymatic source for the synthesis of coproporphyrin III from [¹⁴C]δ-aminolevulinic acid with a high yield of conversion (?60%). Both specific radioactivity and total radioactivity of coproporphyrin III can be adjusted fairly well. This procedure is not time consuming for yeast acellular extracts or porphyrin ester preparations. The acellular extracts can be stored frozen (?30°C) for at least 1 year without loss of enzymatic activity. The same procedure can be used for [¹⁴C]protoporphyrin preparation.     

Photobiochemistry in the dark: photohemolysis of red cells sensitized by chlorpromazine-bioenergized triplet acetone system

Chlorpromazine is decomposed when it is treated with bioenergized triplet acetone from the 2-methylpropanal/red cells/O₂ system, forming chlorpromazine-5-oxide, with a concomitant strong hemolytic effect observed by a spectrophotometric method. Experiments with external superoxide dismutase, catalase, benzoate and bicarbonate indicate the absence of $\text{O}{}_2{}^{\mathrm{<mtext>?</mtext>}}$, H₂O₂ and OH· species as the precursor of the hemolytic effect.Comparison between the 2-methylpropanal/peroxidase/O₂ system and the 2-methylpropanal/red cells/O₂ system in the presence of chlorpromazine, indicate that essentially the same type of mechanism occurs in both cases.These results could explain the $\text{in}$$\text{vivo}$ hemolytic and toxic effect of chlorpromazine in the dark.     

A more sensitive assay for histone deacetylase

The new assay uses as substrate a peptide derived from the amino terminal domain of calf histone H4. The peptide contains all the lysines that are acetylated in H4 in vivo and these lysines are specifically labeled in vitro with acetic anhydride to a high specific activity. This substrate allows histone deacetylase activity to be measured economically and with high sensitivity either with pure enzyme or with crude extracts.     

Digestion of protein substrates by subtilisin: immobilization changes the pattern of products

Subtilisin BPN' (Bacillus protease strain N') was immobilized on glass-bead carriers of controlled pore size by the glutaraldehyde method. The Vmax and Km values of the synthetic substrate were similar for immobilized and free enzymes. However, the hydrolytic patterns of immobilized and free enzymes toward casein and carboxymethylated lysozyme were different. The free enzyme rapidly hydrolyzed the substrate in the early stage of the reaction to produce peptides of various sizes. The immobilized enzyme, however, slowly digested the casein and lysozyme during digestion; even in the late stage of digestion the original substrates were present in the reaction mixture. The peptide size produced by immobilized enzyme depended on the pore size of the carrier; enzyme immobilized on glass of smaller pore size produced smaller peptide products. These phenomena found with our system of immobilized protease and a protein substrate can be explained by a multiple attack mechanism, in which the substrate that has been forced to enter the matrix is attacked many times by the protease to be completely hydrolyzed, because the substrate and the intermediate-sized product are trapped inside the matrix under reduced diffusion movement. To explain the effective digestion that forms amino acids, we have proposed that a multiple type of attack is responsible for the intracellular protein degradation that takes place in cellular organelles in which hydrolytic enzymes are entrapped.     

Isolation and characterization of an apoprotein from the d less than 1.006 lipoproteins of human and canine lymph homologous with the rat A-IV apoprotein.

The singlet oxygen traps, 2,5-diphenylfurane and 1,3-diphenylisobenzofurane were oxidized to cis-benzoylethylene and o-dibenzoylbenzene during the decomposition of diisopropyl-N-nitrosamine catalyzed by peroxidase. Singlet oxygen quenchers inhibited this conversion and also the chemiluminescence accompaying the catalyzed reaction. The chemiluminescence is enhanced by 1,4-diazobicyclo (2.2.2) octane, fluorescein, eosin rhodamine B and rose bengal but little effect was detected in the presence of 9,10-dibromoanthracene-2-sulfonate, 9,10-diphenylanthracene-2-sulfonate and anthracene-2-sulfonate. An emission spectrum of the unsensitized reaction in 560 – 600 nm region was observed. It is concluded that singlet oxygen is formed during peroxidase catalyzed degradation of diisopropyl-N-nitrosamine.     

Studies on the metabolism of calciferol. XIV: Evidence of a circadian rhythm in the activity of the 25-hydroxyvitamin D3-1-hydroxylase.

The regulated production of 1α,25-dihydroxyvitamin D₃ by the renal enzyme 25-hydroxyvitamin D₃-1α-hydroxylase is known to be positively related to the calcium needs of the chick. The activity of this enzyme is now shown to exhibit a circadian-like rhythmicity with peak periods occurring every 20–26 hours. This rhythmicity in activity appears to be affected by the external light/dark cycle to which the birds are exposed.     

A rapid sensitive silver stain for polypeptides in polyacrylamide gels

The use of silver to detect polypeptides was originally achieved by modifying tissue stains. By adapting methods of photochemistry we have developed a new silver stain for polypeptides which is nearly as sensitive but much more efficient than these earlier procedures. The new silver stain utilizes only three solutions and allows protein patterns to be visualized within 50 min. Its sensitivity is 100 times that of the Coomassie blue stain.     

Synthesis of guanine nucleosides by fusion,and a mechanistic aspect of the reaction

N²-Acetylguanine (1) was condensed by fusion with the fully acetylated derivatives of the following sugars: β-D-ribofuranose (2), β-D-ribopyranose (3), α-D-xylopyranose (4), β-D-xylopyranose (5), α-D-glucopyranose (6), and β-D-gluco-pyranose (7). The reaction of 1 with either 2 or 3 gave a mixture of 7-β, 9-α, and 9-β isomers, whereas only the 7-β and 9-β isomers, and virtually no 9-α isomer, were obtained when 4, 5, 6, and 7 were used. When each isomeric acetylated ribofuranosylguanine was heated in the presence of an acidic catalyst, a mixture of 7-β, 9-α, and 9-β nucleosides was formed. Close examination of the product ratios showed that the ratio of 7:9 isomers remained unchanged throughout the reactions, but the anomeric nature of the 9-substituted nucleoside was dependent on the sugar used.     

Pseudomonas aeruginosa transhydrogenase: affinity of substrates for the regulatory site and possible hysteretic behavior.

The polymeric enzyme transhydrogenase from Pseudomonas aeruginosa (NADPH:NAD⁺ oxidoreductase; EC 1.6.1.1) has been shown to possess distinct catalytic and regulatory sites, despite the close structural relationship between substrates and effectors. The present report substantiates the previous conclusions from kinetic and affinity chromatography studies, which have suggested that the substrates NADPH and oxidized thionicotinamide ademine dinucleotide phosphate could bind to both catalytic and regulatory sites. In addition, the allosteric R form of the enzyme appears now to be stabilized against high dilution inactivation.The oxidized substrate thionicotinamide adenine dinucleotide forms a dead end complex on binding to the catalytic site in the T form. The process is slow, and can be termed hysteretic, as defined by Frieden (J. Biol. Chem. (1970), 245, 5788–5799).     

Interaction of the components of the prothrombinase complex

The interaction of components of the prothrombinase complex, i.e. bovine Factor X or Factor Xa. bovine Factor V or Factor Va, phospholipid, and Ca²⁺, in various combinations was studied primary by a gel filtration technique. In experiments, in which phospholipids ranging from those isolated from naturally occurring sources to those long chain (18 : 1) as well as short chain 6 : o and 7 : 0 fatty acids prepared by chemical and enzymatic synthesis were used, it was evident that a net negative surface charge on the lipid dispersions was one of the important requirements for interaction. Though the short chain fatty acid phospholipids interacted with the proteins of the prothrombinase complex, there was invariably a diminution in the activity of the enxyme complex. It was established that Factor V or Va did not bind Ca²⁺ and that the binding of either of these factors with phospholipids (with a net negative charge) was not dependent on Ca²⁺. However, the interaction of Factor X or Factor Xa with phospholipids with a negative charge required Ca²⁺. It was shown that Factor X could bind to the same type of lipid surface as that notes for Factor Xa. Of interest was the apparent difference in the phospholipid binding characteristics of the two variant forms of bovine plasma Factor X, i.e. X₁ and X₂, which might in part explain the differences in their specific activities. Of importance was the lack of demonstrable complex formation between Factors II, X and V in the absence of phospholipids and/or in the presence or absence of Ca²⁺. The significance of these results as they might apply to the configuration of the prothrombinase complex and its interaction with prothrombin plus the usefulness of the short chain fatty phospholipid in exploring these lipid-protein interactions are discussed.     

On the ring transformation of hydrazine derivatives of l-ascorbic acid into nitrogen heterocyclic derivatives

l-hreo-2,3-hexodiulosono-1,4-lactone 2-(p-methoxyphenylhydrazone) (1) was condensed with arylhydrazines to give mixed bishydrazones, whose acetylation gave the corresponding di-O-acetyl derivatives. The hydrazone 1 undergoes elimination of one molecule of water per molecule during, the acetylation, and gives 4-(2-acetoxy- ethylidene)-4-hydroxy-2,3-dioxobutano-1,4-lactone 2-(p-methoxyphenylhydrazone), which reacts with methylhydrazine, via a ring transformation process, to give 1-methyl-3-(L-methylpyrazolin-3-yl)-4,5-pyrazoledione 4-(p-methoxyphenylhydrazone). Alkali rearranged the mixed bishydrazones to 1-aryl-3-(l-threo-glycerol-1-yl)-4,5- pyrazoledione 4-(p-methoxyphenylhydrazones), which gave triacetyl and tribenzoyl derivatives, and, upon periodate oxidation, afforded 1-aryl-3-formyl-4,5- pyrazolediones 4-(p-methoxyphenylhydrazones) that gave the corresponding phenylhydrazones. The n.m.r. and mass spectra of some of these derivatives have been investigated.     

The characterization of a chitin-associated D-glucan from the cell walls of Aspergillus niger

Exhaustive extraction of the cell walls of Aspergillus niger with 10% NaOH solution leaves an alkali-resistant residue containing chitin and glucan as the major components. The glucan in this residue comprises 58.7% of the total cell wall glucan and was characterized by permethylation, and identification of the resulting $\text{O-}\text{methyl-}\text{D}\text{-glucoses}$ obtained after hydrolysis by gas-liquid chromagtography and mass spectrometry of the derived partially acetylated, partially methylated, [1-²H]alditols. The glucan was separated from the chitin by acetylation of the alkali-resistance material, a procedure which separates a large portion of the total glucan as a chloroformsoluble acetate, abd by treatment of the alkali-insoluble residue with nitrous acid, a procedure which was found to render the complex soluble in dimethylsulfoxide and amenable, therefore, to permethylation. The data collected suggests that the preparation is an essentially linear glucan containing 85–95% 1 → 3 linkages and 10–15% 1 → 4 linkages. An analysis of the glycosidic linkages using NMR spectroscopy indicate that both α and β linkages are present in the ratio of 4:1. An identical glucan appears to be present in the cell walls of Penicillium chrysogenum as well as the spore cell walls of both organisms, as evidenced by methylation studies.