中国海梨甲藻科几种甲藻的分类与形态鉴定

由于生活史特殊以及分类学历史复杂, 国内外有关梨甲藻科物种的分类学研究比较少。本研究通过形态分类学方法, 详细阐述了梨甲藻物种的分类学历史沿革, 对我国海域的11种梨甲藻科物种的孢囊进行了分类学研究。我们认为其中的1种应隶属于球甲藻属(Dissodinium), 其余10种可归为梨甲藻属(Pyrocystis)(包括2个变种, 2个变型), 对每个物种都进行了详细的形态学描述, 认为拟新月球甲藻(Dissodinium pseudolunula)与新月梨甲藻(Pyrocystis lunula)、优美梨甲藻(Pyrocystis elegans)与粗梨甲藻(Pyrocystis robusta)的分类学关系还需要进一步研究。     

Integration of molecular, ecological, morphological and endosymbiont data for species delimitation within the Pnigalio soemius complex (Hymenoptera: Eulophidae)

Integrative taxonomy is a recently developed approach that uses multiple lines of evidence such as molecular, morphological, ecological and geographical data to test species limits, and it stands as one of the most promising approaches to species delimitation in taxonomically difficult groups. The Pnigalio soemius complex (Hymenoptera: Eulophidae) represents an interesting taxonomical and ecological study case, as it is characterized by a lack of informative morphological characters, deep mitochondrial divergence, and is susceptible to infection by parthenogenesis‐inducing Rickettsia. We tested the effectiveness of an integrative taxonomy approach in delimiting species within the P. soemius complex. We analysed two molecular markers (COI and ITS2) using different methods, performed multivariate analysis on morphometric data and exploited ecological data such as host–plant system associations, geographical separation, and the prevalence, type and effects of endosymbiont infection. The challenge of resolving different levels of resolution in the data was met by setting up a formal procedure of data integration within and between conflicting independent lines of evidence. An iterative corroboration process of multiple sources of data eventually indicated the existence of several cryptic species that can be treated as stable taxonomic hypotheses. Furthermore, the integrative approach confirmed a trend towards host specificity within the presumed polyphagous P. soemius and suggested that Rickettsia could have played a major role in the reproductive isolation and genetic diversification of at least two species.     

Gorillas of Bwindi-Impenetrable Forest and the Virunga Volcanoes: Taxonomic implications of morphological and ecological differences

Based on their geographic proximity to the Virunga Volcanoes (≈ 25 km), the Bwindi-Impenetrable Forest gorillas have been referred to the subspecies Gorilla gorilla beringei. Differences in anatomy, habitat, ecology, and behavior, however, suggest Bwindi gorillas are distinct from those in the Virungas. Relative to Virunga gorillas, Bwindi gorillas live at lower elevations, in warmer temperatures, are much more arboreal, have longer day ranges and larger home ranges, and eat much more fruit and pith, and less bamboo and leaves. Morphological differences reflect the differences in ecology, habitat, and behavior. Bwindi gorillas measured have smaller bodies, relatively longer limbs, hands, and feet, shorter trunks, thumbs, big toes, and tooth row lengths, and narrower trunks and orbital breadths than Virunga gorillas. These differences indicate Bwindi gorillas do not belong to G.g. beringei and should not be referred to as “mountain gorillas.” How unique the distinguishing features of Bwindi gorillas are, and whether or not they should be assigned to a new taxon, depends on the expression of these features in eastern lowland gorillas (G.g. graueri). © 1996 Wiley-Liss, Inc.     

Taxonomic, evolutionary and ecological implications of the leaf anatomy of rhizomatous Iris species

The leaf anatomy of the rhizomatous Iris species with ensiform leaves and the related genera Pardanthopsis and Belamcanda is described. Their isobilateral leaves may or may not have a pseudo-dorsiventral structure. Variable characters of their leaf blades include: outline in transverse section, height and shape of papillae, form and structure of stomata, transverse section outline of marginal fibre strands and sclerenchy matous inner bundle sheath at phloem and xylem poles, forms of mesophyll arrangement, mesophyll structure and air canals, vascular bundle arrangement and the detailed structure of the larger vascular bundles, distribution of tannin, size and distribution of crystals. The taxonomic and ecological significance of these characters has been evaluated.
The anatomical characteristics of 25 supraspecific taxa in three genera are presented and compared in tables. The relationships and evolutionary position of these taxa are discussed. Each of the three subgroups within Iris appears to be correlated with a syndrome of anatomical characters. Some species currently of uncertain taxonomic position are discussed, and their classification based on anatomical data is suggested.
Some characters related to xeromorphy or helomorphy are mentioned.     

Four new species of Pleurosigma (Bacillariophyta) from Alexandria, Egypt

Four new species of Pleurosigma are described from the region of Alexandria in Egypt: P. williamsii sp. nov. , P. mariutensis sp. nov. , P. ramlehensis sp. nov. and P. rushdyensis sp. nov. The taxa had been previously misidentified as P. rigidum W. Sm., P. elongatum W. Sm., P. speciosum var. sumatricum H. Perag. and P. formosum W. Sm., respectively. Due to the close resemblance of P. williamsii, P. mariutensis , P. ramlehensis and P. rushdyensis to P. rigidum , P. elongatum , P. speciosum var. sumatricum and P. formosum and the lack of good illustrations of these previously described species, their valvar features are shown and discussed in relation to the new taxa. © 2002 The Linnean Society of London, Botanical Journal of the Linnean Society , 2002, 140 , 77–92.     

An optimized protocol for the identification of diatoms,flagellated algae and pathogenic protozoa with phylochips

In the past decade, molecular probe‐based methods have proved successful in improving both the efficiency and accuracy of the identification of microorganisms, especially those that are devoid of distinct morphological features. However until recently, these methods had the major drawback of being limited to the identification of only one or just a few species at a time. With the use of DNA microarrays, it is possible to identify large numbers of taxa on a single‐glass slide, the so‐called phylochip. There are numerous microarray protocols in the literature. These protocols share the same principles, but vary in details, e.g. labelling approach or detergent concentration in the washing buffer. In this study, we show that even small variations in hybridization protocols can have a strong impact on the outcome of the microarray hybridization. An optimized protocol for species identification on phylochips is presented. The optimized protocol is the result of a joined effort of three laboratories to develop phylochips for microbial species identification.     

Ecological assessments with algae: a review and synthesis

Algae have been used for a century in environmental assessments of water bodies and are now used in countries around the world. This review synthesizes recent advances in the field around a framework for environmental assessment and management that can guide design of assessments, applications of phycology in assessments, and refinements of those applications to better support management decisions. Algae are critical parts of aquatic ecosystems that power food webs and biogeochemical cycling. Algae are also major sources of problems that threaten many ecosystems goods and services when abundances of nuisance and toxic taxa are high. Thus, algae can be used to indicate ecosystem goods and services, which complements how algal indicators are also used to assess levels of contaminants and habitat alterations (stressors). Understanding environmental managers' use of algal ecology, taxonomy, and physiology can guide our research and improve its application. Environmental assessments involve characterizing ecological condition and diagnosing causes and threats to ecosystems goods and services. Recent advances in characterizing condition include site‐specific models that account for natural variability among habitats to better estimate effects of humans. Relationships between algal assemblages and stressors caused by humans help diagnose stressors and establish targets for protection and restoration. Many algal responses to stressors have thresholds that are particularly important for developing stakeholder consensus for stressor management targets. Future research on the regional‐scale resilience of algal assemblages, the ecosystem goods and services they provide, and methods for monitoring and forecasting change will improve water resource management.     

Biomass, species composition and diversity of epipelic algae in mire pools

The biomass, species composition and diversity of epipelic algae in two small pools of contrasting physicochemical characteristics in Miyatoko Mire were studied in 1992 (pool 3 =site B4 and pool 50 =site D2). A total of 93 species and 67 species of epipelic algae occurred at sites B4 and D2, respectively. Considerable differences were observed between the two sites in the seasonal fluctuations of species number, biomass and dominant species. At site B4, little changed with species number during April–August and markedly increased in October, while biomass was largest in April and gradually decreased during June–October. Diatoms and desmids occupied 33–82% and 15–63% of total algal biomass, respectively. At site D2, species number and biomass were small in April just after the snow-thaw, and increased in June and decreased in August and October. Diatoms occupied 90–98% of total algal biomass. The species diversity was always higher at site D2 than B4. As a result of analyses of water chemistry in the two pools, pool B4 can be recognized as a habitat experiencing high disturbance frequency. It is predicted that pools experiencing frequent disturbance will have less epipelic algal biomass and diversity.     

The Stegana (sensu stricto) species from China,with morphological and molecular evidence (Diptera: Drosophilidae)

Four new species of the subgenus Stegana (sensu stricto) were found and described from China: S. (S.) antha sp. nov., S. (S.) latiorificia sp. nov., S. (S.) huangjiai sp. nov. and S. (S.) nigrifoliacea sp. nov. Three known Stegana (s. str.) species from China: S. (S.) antlia Okada, 1991, S. (S.) cheni Sidorenko, 1997 Sidorenko, V. S. (1997). New Asian species and new records of the genus Stegana Meigen (Diptera, Drosophilidae). I. Subgenera Oxyphortica Duda and Stegana s. str. Annales d la Société Entomologique de France (N. S.), 33, 65–79.[Web of Science ®] , [Google Scholar] and S. (S.) emeiensis Sidorenko, 1997 Sidorenko, V. S. (1997). New Asian species and new records of the genus Stegana Meigen (Diptera, Drosophilidae). I. Subgenera Oxyphortica Duda and Stegana s. str. Annales d la Société Entomologique de France (N. S.), 33, 65–79.[Web of Science ®] , [Google Scholar] are redescribed as supplementary information. A key to the species, based on morphological characters, is provided. The phylogenetic relationships among 14 species of the subgenus Stegana are reconstructed with the combined sequences of the mitochondrial genes, ND2 (NADH dehydrogenase subunit 2) and COI (cytochrome c oxidase, subunit I). Moreover, the intra- and interspecific pairwise K-2P (Kimura's two-parameter) distances among these species are summarized, and the availability of mitochondrial markers in the species identification of the subgenus Stegana are further discussed.

http://www.zoobank.org/urn:lsid:zoobank.org:pub:368C55C3-B101-457C-BD61-BDD8F1B780E5     

Taxonomic note on some paleozoic marine algae (Uzbekistan, Central Asia)

The paleozoic marine algae of Central Asia were recently investigated and attributed to warm-water and Tethyan microflora. If the majority of the taxa (114 out of 117) were already described from other basins, a few elements merit attention. Two chlorophyte species are new (Atractyliopsis nuratauensis nov. sp., Amarellina moscoviensis nov. sp.) and a new Hoeegonites sp. is left in open nomenclature. The flora also contains representatives of the puzzling Moniliporelleae, a rhodophyte family only reported from Kazakhstan with the genus Furcatoporella. An unusual in situ cluster of calcispheres is also illustrated.     

Taxonomic implications of genome size for all species of the genus Gasteria Duval (Aloaceae)

Nuclear DNA content (2C) is used as a new criterion to investigate all species of the genus Gasteria Duval including the three recently described species Gasteria polita van Jaarsv., G. pendulifolia van Jaarsv. and G. glauca van Jaarsv.. The 122 accessions investigated have the same chromosome number (2n=2x=14), with exception of three tetraploid plants found. The nuclear DNA content of the diploids, as measured by flow cytometry with Propidium Iodide, is demonstrated to range from 32.8–43.2 pg. This implies that the largest genome contains roughly 10¹⁰ more base pairs than the smallest. Based on DNA content the species could be divided in five groups: G. rawlinsonii Oberm. with 32.8 pg, 13 mostly inland species with 34.3–36.0 pg, five coastal species with 36.5–39.0 pg and Gasteria batesiana Rowley with 43.2 pg. The thirteen species with 34.3–36.0 pg could be divided further, in a group of eight species occupying mainly very restricted areas with 34.3–35.1 pg and a second group of five species with 35.2–36.0 pg mainly occupying large areas. These five groups did not coincide very well with the two sections and four series of Gasteria based on a cladistic analysis by van Jaarsveld et al. (1994). Based on its long leafy branches, location in the centre of Gasteria species distribution and its by far lowest DNA content, G. rawlinsonii might be the most primitive member of the genus. Nuclear DNA content as measured by flow cytometry is shown to be relevant to provide additional information on the relationships between Gasteria species.     

Description of two new species of Nostoc (Nostocales,Cyanobacteria) from central Mexico,using morphological,ecological, and molecular attributes

The present study describes two new Nostoc species, N. montejanii and N. tlalocii, based on a polyphasic approach that combines morphological, ecological, and genetic characteristics. The five investigated populations, including those from newly collected material from central Mexico, were observed to possess morphological features characteristic of the Nostoc genus. Results showed that both new species are strictly associated with running water, and they show clear differences in their habitat preferences. The 16S rRNA gene sequences of the five strains displayed between 98% and 99% similarity to the genus Nostoc sensu stricto. The 16S rRNA gene phylogenetic analyses inferred using Bayesian inference, maximum likelihood, and parsimony methods, placed these five strains in two separate clades distinct from other Nostoc species. The secondary structures of the 16S–23S internal transcribed spacer rRNA region in the two new species showed >10.5% dissimilarities in the operons when compared with other Nostoc species. In addition, clear morphological differences were observed between the two Mexican species, including the color of the colonies (black in N. montejanii and green in N. tlalocii), the size of the cells (greater in N. montejanii), and the number of polyphosphate granules present in the cells (one in N. montejanii and up to four in N. tlalocii).     

A critical review of soil algae as a crucial soil biological component of high ecological and economic significance

Aero-terrestrial algae are ecologically and economically valuable bioresources contributing to carbon sequestration, sustenance of soil health, and fertility. Compared to aquatic algae, the literature on subaerial algae is minimal, including studies of distinctive habitats such as forest soils, agricultural fields, deserts, polar regions, specific subaerial zones, artificial structures, and tropical soils. The primary goal here was to identify the gaps and scope of research on such algae. Accordingly, the literature was analyzed per sub-themes, such as the “nature of current research data on terrestrial algae,” “methodological approaches,” “diversity,” “environmental relationships,” “ecological roles,” and “economic significance.” The review showed there is a high diversity of algae in soils, especially members belonging to the Cyanophyta (Cyanobacteria) and Chlorophyta. Algal distributions in terrestrial environments depend on the microhabitat conditions, and many species of soil algae are sensitive to specific soil conditions. The ecological significance of soil algae includes primary production, the release of biochemical stimulants and plant growth promoters into soils, nitrogen fixation, solubilization of minerals, and the enhancement and maintenance of soil fertility. Since aero-terrestrial habitats are generally stressed environments, algae of such environments can be rich in rare metabolites and natural products. For example, epilithic soil algae use wet adhesive molecules to fix them firmly on the substratum. Exploring the ecological roles and economic utility of soil and other subaerial algae could be helpful for the development of algae-based industries and for achieving sustainable soil management.     

Taxonomic studies of planktic species of Anabaena based on morphological characteristics in cultured strains

Fifty (50) strains of planktic species of Anabaena (cyanobacteria), including collections from Japan and China and from different culture collections, were induced to form akinetes at low temperature (15 °C). Their morphologies were then observed and described. Fourty seven strains successfully formed akinetes and these were classified into 20 species comprising seven with straight trichomes and 13 with coiled trichomes. Three strains, which did not form akinetes, were separated into two taxonomic groups, but could not be identified to any described species. In addition, a key to the planktic species of Anabaena described in the study is presented.     

Why are there few algae on snail shells? The effects of grazing,nutrients and shell chemistry on the algae on shells of Helisoma trivolvis

1. Freshwater snails often lack visible growths of algae on their shells. We tested three possible mechanisms that may account for this (grazing, snail-derived nutrients and chemical defences), using the ramshorn snail Helisoma trivolvis .
2. The experiments were carried out in floating plastic enclosures in a pond and comprised seven treatments. Grazing treatments were: a lone snail (ungrazed, as self-grazing does not occur), Helisoma with conspecifics, Helisoma with the co-occurring pond snail Physa sp., empty shells with Helisoma , and ungrazed empty shells. Nutrient effects were possible in all treatments with occupied shells (lone snail; Helisoma with conspecifics, and with Physa ) versus absent in other treatments. Testing for chemical defences compared algae on fresh empty shells, weathered shells (outer organic periostracum layer absent) and boiled fresh shells (with denaturization of susceptible proteins).
3. Diatoms dominated algal assemblages on snail shells. Although the upright diatom Gomphonema gracile was abundant on all shells, it was dominant on the shells of snails housed with other snail grazers (either Helisoma or Physa ).
4. Only the lone snail (nutrients but no grazing) showed higher algal biomass, so presumably any nutrient effect in the treatments with grazers was masked. Both Helisoma and Physa were observed apparently grazing on Helisoma shells, and consequently algal biomass in multi-snail treatments was similar to that on empty shells. Scanning electron microscopy revealed that algal density was highest near the aperture of live snails, but not empty shells; this is consistent with a nutrient addition effect. There was no evidence of chemical defences against algal growth.
5. In soft-bottomed freshwater habitats with abundant snails, shells of living snails provide nutrient-augmented substrata that may indirectly boost overall snail production.     

Reassessment of species distribution and occurrence of mud crab (Scylla spp., Portunidae) in Malaysia through morphological and molecular identification

This study utilized genetic and morphometric approaches to assess the molecular and morphometric differentiation among commercially important species of mud crab. Molecular investigations were derived from 542 bp mitochondrial DNA COI on 249 individuals within genus Scylla from nine states in Malaysia represents four marine regions; South China Sea, Sulu Sea, Straits of Singapore and Straits of Malacca. Four specimens were obtained from Indonesia to give a robust analysis in this study. For species delimitation, Automatic Barcode Gap Discovery (ABGD) method on a web interface was employed. Analysis on phylogenetics was implemented utilizing Neighbour joining (NJ) and Maximum Parsimony (MP) methods. The inter- and intraspecies genetic distances (D_s) was computed using Kimura 2-parameter distance and executed in MEGA version 5.05. All samples were genetically and morphologically identified and clustered into four distinct species. Among the species, S. olivacea was the most abundant (n = 111), on the other hand the occurrence of S. paramamosain in Malaysia was very low (n = 29). No single individual of S. serrata from Malaysia was recorded in this study. Both genetic distance and phylogenetic approaches exhibited a correlative monophyletic association among all specimens analysed. This present study is crucial as it reports the reassessment of all species within genus Scylla in Malaysia, eventually could be employed as a reference source for subsequent research mainly on mariculture and other conservation efforts for the species.     

THE ECOLOGY OF EPIPELIC ALGAE OF FIVE WELSH LAKES,WITH SPECIAL REFERENCE TO VOLVOCALEAN GREEN FLAGELLATES (CHLOROPHYCEAE)1

The ecology of epipelic algae on the marginal sediments of five Welsh lakes was studied over an annual cycle. The lakes, Llydaw, Cwellyn, Padarn, Maelog and Coron ranged from very oligotrophic to nutrient-rich. Attention was focussed on chlamydomonad flagellates, diatoms, blue-green algae and euglenoids and the different proportions of these in algae in the epipelon of lakes of contrasting water quality. A total of 75 algal taxa was found in the five lakes, 25 were species of volvocalean flagellates. Mean annual population density of these flagellates differed by an order of magnitude between the lakes. The greatest population density was recorded for Chlamydomonas anticontata Schiller in nutrient-rich Llyn Maelog. Twenty species of pennate diatoms were recorded frequently in the epipelon. In the nutrient-rich lakes, Maelog and Coron, pennate diatoms were dominant on the sediments, where they exhibited population maxima in spring and autumn. Increase in numbers of epipelic diatoms was recorded when silica concentrations were minimum in the overlying lake waters. Navicula hungarica Grun. achieved the maximum population density, 260 000 cells · cm^?2. Euglenoids formed large epipelic populations during late-summer and autumn in these nutrient-rich lakes. Blue-green algae were more important, proportionally, in the nutrient-poor mountain lakes, which had sediments of higher organic content. Chlamydomonads were the major algal component of the epipelon in the mountain lakes, Llydaw and Cwellyn, where the sediments were characterized by larger particle size, and higher organic content. In the nutrient-rich lakes, where the sediments had higher calcium content, chlamydomonads formed significant populations only during spring and summer, when nutrient levels were minimal in the overlying lakewaters.     

Taxonomic revision of the genus Galictis (Carnivora: Mustelidae): species delimitation,morphological diagnosis,and refined mapping of geographical distribution

Although critical for enabling in‐depth evolutionary, ecological, or conservation‐orientated studies, taxonomic knowledge is still scarce for many groups of organisms, including mammals of the order Carnivora. For some of these taxa, even basic aspects such as species limits and geographical distribution are still uncertain. This is the case for the Neotropical mustelid genus Galictis, considered one of the least studied carnivoran genera in the Americas. To address this issue, we performed a comprehensive assessment of morphological and molecular characters to test the number of species within Galictis, and to characterize their distinctiveness and evolutionary history. In addition, we reviewed and consolidated the available information on the taxonomy of this genus, so as to provide a historical framework upon which we could interpret our data. Our analyses demonstrated that two Galictis species can be clearly delimited and diagnosed using metric and nonmetric morphological characters as well as DNA sequences from mitochondrial and nuclear gene segments. On the basis of this clarified species‐level delimitation, we reassessed the geographical range of each Galictis taxon, identifying possible areas of sympatry between them. These results provide a solid taxonomic framework for Galictis, enabling the development of additional studies focusing on this poorly known taxon. © 2013 The Linnean Society of London, Zoological Journal of the Linnean Society, 2013, 167 , 449–472.