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New gene functions in megakaryopoiesis and platelet formation
Authors:Gieger Christian  Radhakrishnan Aparna  Cvejic Ana  Tang Weihong  Porcu Eleonora  Pistis Giorgio  Serbanovic-Canic Jovana  Elling Ulrich  Goodall Alison H  Labrune Yann  Lopez Lorna M  Mägi Reedik  Meacham Stuart  Okada Yukinori  Pirastu Nicola  Sorice Rossella  Teumer Alexander  Voss Katrin  Zhang Weihua  Ramirez-Solis Ramiro  Bis Joshua C  Ellinghaus David  Gögele Martin  Hottenga Jouke-Jan  Langenberg Claudia  Kovacs Peter  O'Reilly Paul F  Shin So-Youn  Esko Tõnu  Hartiala Jaana  Kanoni Stavroula  Murgia Federico  Parsa Afshin  Stephens Jonathan  van der Harst Pim  Ellen van der Schoot C  Allayee Hooman  Attwood Antony
Affiliation:Institute of Genetic Epidemiology, Helmholtz Zentrum München, German Research Center for Environmental Health, Ingolst?dter Landstr 1, 85764 Neuherberg, Germany. christian.gieger@helmholtz-muenchen.de
Abstract:Platelets are the second most abundant cell type in blood and are essential for maintaining haemostasis. Their count and volume are tightly controlled within narrow physiological ranges, but there is only limited understanding of the molecular processes controlling both traits. Here we carried out a high-powered meta-analysis of genome-wide association studies (GWAS) in up to 66,867 individuals of European ancestry, followed by extensive biological and functional assessment. We identified 68 genomic loci reliably associated with platelet count and volume mapping to established and putative novel regulators of megakaryopoiesis and platelet formation. These genes show megakaryocyte-specific gene expression patterns and extensive network connectivity. Using gene silencing in Danio rerio and Drosophila melanogaster, we identified 11 of the genes as novel regulators of blood cell formation. Taken together, our findings advance understanding of novel gene functions controlling fate-determining events during megakaryopoiesis and platelet formation, providing a new example of successful translation of GWAS to function.
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