Circular Rep encoding single stranded (CRESS) DNA virus-like sequences detected in quagga mussels (Dreissena rostriformis bugensis) and sediments from the central Lake Michigan benthos

Circular Rep Encoding Single Stranded (CRESS) DNA viruses are a diverse group of viruses that have been identified in both terrestrial and aquatic ecosystems. Recent work in the Laurentian Great Lakes characterized the ecology and diversity of CRESS-DNA viruses associated with amphipods, Diporeia spp. In the last 20 years the Lake Michigan benthos has changed considerably with drastic population declines of Diporeia spp. concurrent with an increase in invasive quagga mussel (Dreissena rostriformis bugensis) abundance. The purpose of this study was to characterize CRESS-DNA virus-like elements (VLES; which could represent complete, partial/defective, endogenized or satellite viruses) associated with both invasive quagga mussels and in sediment collected in central Lake Michigan. Viral metagenomic libraries were prepared from two size classes (>25 mm and <15 mm shell length) of Lake Michigan quagga mussels and for two different sediment layers (136 mm and 290 mm below the lake floor) in a sediment core extracted from the lake. Viral metagenomes were different between quagga mussels and sediment cores. Nine VLE sequences were present in both the quagga mussel tissues and the sediment core layers analyzed. Cs¹³⁷ radiometric dating results indicate that these VLEs were present in the sediment prior to arrival of quagga mussels in Lake Michigan. These data suggest quagga mussels may interact with CRESS-DNA VLEs and algal DNA VLEs historically present in the Lake Michigan benthos. Overall, these data suggest that quagga mussels interacted with CRESS-DNA VLES present in Lake Michigan benthos since at least 1952.