基于qPCR和LAMP技术的马铃薯晚疫病菌快速检测方法

马铃薯晚疫病菌（Phytophthora infestans）能侵染多种茄科植物,它引起的马铃薯晚疫病,是马铃薯生产中的第一大病害。为了开发能在田间快速检测马铃薯晚疫病病原的方法,利用P. infestans T30-4基因组测序数据的contig 1.18131,设计qPCR和LAMP引物,优化扩增条件后得到引物的特异性和灵敏度,最后通过检测田间收获薯块,比较形态学传统方法、qPCR及LAMP的差异。特异性检测结果发现,qPCR和LAMP仅在含有P. infestans DNA模板的体系有阳性扩增,在寄主和其他微生物DNA中均无扩增;在优化的条件下,qPCR和LAMP的检测下限可达1×10 ^-6ng/μL,在有寄主和其他微生物DNA存在的条件下,引物的灵敏度没有显著差异。利用两种快速方法对在大理、丽江及昆明3个地区田间收获薯块上检测发现,qPCR和LAMP方法得到的检出率差异极为不显著（P=0.420）,两种快速检测方法和形态学鉴定方法检出率差异极显著（P=0.009）。在大理、丽江及昆明3个地区的薯块中,两种分子检测方法检出率均比形态学方法高。其中,qPCR检测方法比形态学方法分别提高了12.00%、2.00%、8.70%;LAMP检测方法比形态学方法分别提高了11.30%、2.00%、8.70%。     

叶面滞尘量对大叶黄杨光谱特征影响研究

  目的  叶面滞尘会影响植被光谱特征，削弱植被指数对植被的响应能力，影响反演评估的准确性。为探究叶面滞尘量对植被光谱响应特征及预测模型的影响，本文以北京市常见常绿绿化树种大叶黄杨为研究对象展开研究。  方法  从封闭区域、半封闭区域、开放区域，采集叶片样本，并收集环境灰尘。通过室内控制试验，利用ASD FildSpec Handheld光谱仪测量不同滞尘量叶片的高光谱数据，选取5个特征波段，通过光谱角的方法研究了叶面滞尘量对叶片光谱特征的影响，以及滞尘量对叶面滞尘量预测模型的精度和稳定性影响。  结果  随着叶面滞尘量的增加，植被光谱曲线特征逐渐减弱，灰尘的特征逐渐增强，但光谱曲线的总体变化趋势基本一致。当叶面滞尘量 > 120 g/m2时，光谱曲线的基本表现为灰尘的光谱特征。当叶面滞尘量较少时，预测模型的模拟精度相对较高，随着滞尘量的增加，所有模拟预测模型的决定系数均减小；当叶面滞尘量 > 120 g/m2时，预测模型对叶面滞尘量的模拟预测能力将更差，并且均方根误差（RMSE）随着叶片单位面积滞尘量的增加而增大，模拟预测模型的稳定性及预测精度逐渐降低。光谱角对滞尘叶片350 ~ 1 770 nm波段区间的光谱变化十分敏感，利用叶片光谱角检测滞尘程度不需要分区域讨论，只需与阈值做简单的比较，方法简便易行。  结论  本研究通过室内控制试验，研究叶面滞尘量对植被光谱响应特征，可为建立滞尘植被光谱反射物理模型提供参考与借鉴。      

Preparation and properties of solid polymer electrolyte based on imidazolium-based ionic liquids for structural capacitors

We prepared solid polymer electrolytes (SPEs) composed of poly(ethylene glycol) monomethyl ether acrylate (1A9OMe) and 1-ethyl-3-methylimidazolium trifluoromethanesulfonate ([EMIm][OTF]) and 1-ethyl-3-methylimidazolium bis(trifluoromethane sulfonyl) imide ([EMIm][TFSI]) as the ionic liquid. The SPEs formed by appropriately adding ionic liquids in the 1A9OMe prior to thermal cure. The ratio of 1A9OMe and ionic liquid was 1:9, 3:7, and 5:5, respectively. The characterization of solid polymer electrolytes were investigated using Fourier transform infrared spectroscopy in the attenuated total reflectance mode (FTIR-ATR), Electrochemical impedance spectroscopy (EIS), cyclic voltammetry (CV), and glavanostatic charge-discharge test. The highest ionic conductivity of SPEs was found to be 4.90×10^?4 S/cm in a 1A9OMe/[EMIm][OTF] of 3:7. As IL contents were increased, the specific capacitance of supercapacitor was increased. The specific capacitance of supercapacitor for ionic liquid with large ion size was lower than that for ionic liquid with smaller ion size.     

Plant species identification using fecal DNAs from red-eared slider and Reeves’ pond turtle in agricultural canals for rural ecosystem conservation

Fecal DNA samples from the red-eared slider and Reeves’ pond turtle, suspected pests of lotus root paddies, were used to identify the plant species eaten by these turtles in order to develop a strategy for rural ecosystem conservation. The fecal samples were obtained from young and adult individuals (mostly female) of both species living in agricultural canals surrounding lotus root paddies in Tokushima Prefecture, Japan. The samples were screened for the presence or absence of DNA from nine plant species using PCR and plant species-specific primers for the rbcL gene of chloroplast DNA. In the red-eared slider, our analysis identified seven plant species in the fecal DNA samples of adults and three plant species in those of young individuals. In Reeves’ pond turtle, our analysis identified two plant species from adult fecal samples and one species from those of young individuals. Thus, adult red-eared sliders consume a greater range of plants than young red-eared sliders or Reeves’ pond turtles. Both turtle species, independently of age, consumed lotus plants and were likely to cause feeding damage to lotus roots. Considering the plant species detected in adult red-eared sliders and these plant habitats, we suggest that this adult turtle is likely to travel between the agricultural canals and the lotus root paddies. These findings will help the development of strategies for preventing damage to lotus roots by these turtles; furthermore, they indicate that fecal DNA analysis will be applicable to investigation of the feeding habits of other animal species.     

Vole abundance and reindeer carcasses determine breeding activity of Arctic foxes in low Arctic Yamal,Russia

Background

High latitude ecosystems are at present changing rapidly under the influence of climate warming, and specialized Arctic species at the southern margin of the Arctic may be particularly affected. The Arctic fox (Vulpes lagopus), a small mammalian predator endemic to northern tundra areas, is able to exploit different resources in the context of varying tundra ecosystems. Although generally widespread, it is critically endangered in subarctic Fennoscandia, where a fading out of the characteristic lemming cycles and competition with abundant red foxes have been identified as main threats. We studied an Arctic fox population at the Erkuta Tundra Monitoring site in low Arctic Yamal (Russia) during 10 years in order to determine which resources support the breeding activity in this population. In the study area, lemmings have been rare during the last 15 years and red foxes are nearly absent, creating an interesting contrast to the situation in Fennoscandia.

Results

Arctic fox was breeding in nine of the 10 years of the study. The number of active dens was on average 2.6 (range 0–6) per 100 km² and increased with small rodent abundance. It was also higher after winters with many reindeer carcasses, which occurred when mortality was unusually high due to icy pastures following rain-on-snow events. Average litter size was 5.2 (SD = 2.1). Scat dissection suggested that small rodents (mostly Microtus spp.) were the most important prey category. Prey remains observed at dens show that birds, notably waterfowl, were also an important resource in summer.

Conclusions

The Arctic fox in southern Yamal, which is part of a species-rich low Arctic food web, seems at present able to cope with a state shift of the small rodent community from high amplitude cyclicity with lemming dominated peaks, to a vole community with low amplitude fluctuations. The estimated breeding parameters characterized the population as intermediate between the lemming fox and the coastal fox ecotype. Only continued ecosystem-based monitoring will reveal their fate in a changing tundra ecosystem.

     

<Emphasis Type="Italic">Lupinus albus</Emphasis> Conglutin Gamma Modifies the Gene Expressions of Enzymes Involved in Glucose Hepatic Production <Emphasis Type="Italic">In Vivo</Emphasis>

Lupinus albus seeds contain conglutin gamma (Cγ) protein, which exerts a hypoglycemic effect and positively modifies proteins involved in glucose homeostasis. Cγ could potentially be used to manage patients with impaired glucose metabolism, but there remains a need to evaluate its effects on hepatic glucose production. The present study aimed to analyze G6pc, Fbp1, and Pck1 gene expressions in two experimental animal models of impaired glucose metabolism. We also evaluated hepatic and renal tissue integrity following Cγ treatment. To generate an insulin resistance model, male Wistar rats were provided 30% sucrose solution ad libitum for 20 weeks. To generate a type 2 diabetes model (STZ), five-day-old rats were intraperitoneally injected with streptozotocin (150 mg/kg). Each animal model was randomized into three subgroups that received the following oral treatments daily for one week: 0.9% w/v NaCl (vehicle; IR-Ctrl and STZ-Ctrl); metformin 300 mg/kg (IR-Met and STZ-Met); and Cγ 150 mg/kg (IR-Cγ and STZ-Cγ). Biochemical parameters were assessed pre- and post-treatment using colorimetric or enzymatic methods. We also performed histological analysis of hepatic and renal tissue. G6pc, Fbp1, and Pck1 gene expressions were quantified using real-time PCR. No histological changes were observed in any group. Post-treatment G6pc gene expression was decreased in the IR-Cγ and STZ-Cγ groups. Post-treatment Fbp1 and Pck1 gene expressions were reduced in the IR-Cγ group but increased in STZ-Cγ animals. Overall, these findings suggest that Cγ is involved in reducing hepatic glucose production, mainly through G6pc inhibition in impaired glucose metabolism disorders.     

Application of silver nanoparticles as an antibacterial mordant in wool natural dyeing: Synthesis,antibacterial activity,and color characteristics

Madder is a natural colorant which is commonly applied with metal salts as a mordant to improve its affinity to fibers and color fastness. Madder produces an insoluble complex or lake in the presence of metal ions on mordanted fabric. In this study, wool fabric was pretreated with AgNPs (silver nanoparticles) as a mordant, then dyed with madder. The wool fabric samples were examined by scanning electron microscopy (SEM) and their colorimetric characteristics were evaluated. The formation of spherical silver nanoparticle was confirmed using UV-Visible spectroscopy, SEM images, and elemental analysis. The average size of synthesized silver nanoparticles on the surface of wool fibers is around 73 nm. The dyed wool samples were pretreated with different concentration of Ag⁺ ions or AgNPs, which showed higher color strength value compared to untreated dyed wool fabric. This pretreatment also presented good antibacterial activity.     

Ornithological importance of artificial ponds: a case study at Kabaklı Pond,south-eastern Anatolia,Turkey

The birds of Kabakl? Pond and its near surrounding were surveyed between October 2014 and December 2015 periods. During the study period, 105 bird species that belong to 12 orders and 34 families were detected and represented. Among these species determined, 17 of them certainly, 19 probably and 11 possibly breed in the area, while 58 of them are wintering or transitory migrating birds for the area. Among the recorded species, seven are globally threatened, while 20 are threatened for Turkey without least concern species. Obtained information suggests that this small artificial area has a great importance for many bird species related to habitat that have. Habitat preferences of species were analysed, and it was determined that the most preferred habitats are pond (water surface), wooded and agricultural zones, respectively. Also, the maximum bird number obtained during April and December, while maximum bird species richness observed during April. Results suggest that artificial ponds can be important for birds as feeding, resting and breeding area due to rapidly decline in natural wetland areas. Effective protection of the area requires the prevention of illegal hunting, fishing, human disturbance and pasturing. Also, in order to extend the existing reed and meadow areas, convenient plantation of natural plants at around of pond has a critic role for waterfowl.     

Investigation of the Potential Health Benefits as Lipase Inhibitor and Antioxidant of <Emphasis Type="Italic">Leopoldia comosa</Emphasis> (L.) Parl.: Variability of Chemical Composition of Wild and Cultivated Bulbs

There is a great interest in the nutritional value of vegetables and fruits and how the habitat affects nutritive and biological properties. In vitro studies here reported were performed to evaluate the inhibitory activity of formulations from edible plant on pancreatic lipase. The aim of this study was also to evaluate the biovariability of L. comosa (L.) Parl. bulbs from Italy. The wild bulbs were compared with the same cultivated species that are commonly commercialized to identify samples with the best quality for a potential therapeutic application. Hydroalcoholic extract and polar fraction of wild bulbs showed a very important pancreatic lipase inhibitory activity, with IC₅₀ values of 0.166 ± 0.005 and 0.153 ± 0.005 mg/mL, respectively. In order to characterize the extracts, gas chromatography associated with mass spectrometry (GC/MS) analysis was performed, revealing the predominance of palmitic acid. Phenolic and flavonoid composition was also evaluated. L. comosa extract obtained from wild bulbs demonstrated both antioxidant and anti-obesity activities that might be attributed to a wide range of present phenolic compounds.