Considerations for conducting incubations to study the mechanisms of As release in reducing groundwater aquifers

Microbial Fe reduction is widely believed to be the primary mechanism of As release from aquifer sands in Bangladesh, but alternative explanations have been proposed. Long-term incubation studies using natural aquifer material are one way to address such divergent views. This study addresses two issues related to this approach: (1) the need for suitable abiotic controls and (2) the spatial variability of the composition of aquifer sands. Four sterilization techniques were examined using orange-colored Pleistocene sediment from Bangladesh and artificial groundwater over 8 months. Acetate (10 mM) was added to sacrificial vials before sterilization using either (1) 25 kGy of gamma irradiation, (2) three 1-h autoclave cycles, (3) a single addition of an antibiotic mixture at 1× or (4) 10× the typical dose, and (5) a 10 mM addition of azide. The effectiveness of sterilization was evaluated using two indicators of microbial Fe reduction, changes in diffuse spectral reflectance and leachable Fe(II)/Fe ratios, as well as changes in P-extractable As concentrations in the solid phase. A low dose of antibiotics was ineffective after 70 days, whereas autoclaving significantly altered groundwater composition. Gamma irradiation, a high dose of antibiotics, and azide were effective for the duration of the experiment.     

Mechanisms of expansion for an introduced species of cordgrass, Spartina densiflora, in Humboldt Bay, California

The dominant plant in Humboldt Bay salt marshes in Spartina densiflora, a species of cordgrass apparently introduced from South America. At several salt marshes and restoration sites around Humboldt Bay, distribution of this plant has increased significantly. We investigated the relative contributions of vegetative tiller production and seed germination to the establishment and expansion of S. densiflora. Lateral spread of plants surrounded by competitors were compared to areas without competing plant species. Plants growing in areas without competitors had significantly higher rates of vegetative expansion (p<0.0001). Viable seed production, germination rates, seedling survivorship, and growth of adult plants were measured in six salinity treatments. Approximately 1,977±80 viable seeds are produced per plant (0.25–0.5 m²). The number of germinating seeds was inversely related to increases in salinity. Salinity treatments between 19‰ and 35‰ produced significantly lower germination rates than salinities of 0–18‰ (p<0.0001). Seedling survivorship was 50% at ≤4‰ and 8–14% at ≥11‰. Lateral expansion of adult, greenhouse-grown plants occurred in all salinity treatments, with modest decreases in the highest salinity treatments (p<0.05). Our findings indicate that S. densiflora expands primarily by vegetative expansion, and lateral tillers are produced by throughout the year. Spartina densiflora produces prolific amounts of seed, but recruitment in mature salt marshes may be limited by competitors and higher salinities. At restoration sites, planting of native species such as Salicornia virginica, Distichlis spicata, or Jaumea carnosa may prevent monospecific stands of S. densiflora from developing.     

How a wet tropical rainforest copes with repeated volcanic destruction

The Holocene Period for the province of West New Britain, Papua New Guinea, is characterised by periodic catastrophic volcanism. The region is mantled in dense wet tropical rainforest, and has been occupied by people since the Pleistocene. Analyses of peat from two nearby sites within a lowland rainforest environment provide us with a macro-level landscape account of the periodic destruction and recovery of the coastal forests during seven periods of volcanic activity in the latter part (2900 yr ago to present) of the Holocene. Radiocarbon dating shows the very close correlation of the peat and tephra layers at both sites, yet the pollen analysis reveals different vegetation communities. These initial results allow us to begin identifying the processes of recovery, and to recognise different ecological pressures placed on vegetation at these neighbouring sites. Evidence of hydrological changes are observed beginning with a marine incursion recorded at Garu Site 3 1360 ¹⁴C yr B.P. The distinct differences in the vegetation re-establishment and community regeneration rates suggest the greater level of disturbance at Garu Site 1 could be related to the depth of the ashfall, although the proximity of a known human settlement may also be a contributing factor. Of note, palynologically, we found that the fern spore flora is particularly rich and believe it will be useful for ecological interpretation.     

Turbulence in an almond orchard: Spatial variations in spectra and coherence

The spatial variability of turbulence in a fully-leafed almond orchard was studied. Two three-dimensional sonic anemometers were used to measure turbulence spectra and coherence at different vertical and lateral separations inside the canopy. Peak frequencies of the horizontal velocity components, normalized by local horizontal wind speed, are greater in the canopy crown than in the trunkspace. Peak-normalized frequencies for the vertical velocity power spectra are similar in the canopy crown and in the subcanopy trunkspace. Spectral slopes in the inertial subrange are more negative than those predicted with Kolmogorov's -2/3 theory. It is thought that the foliage elements act to short-circuit the eddy cascade. Lateral separation of the instruments in the subcanopy trunkspace has little effect on the shape of the velocity spectra. On the other hand, lateral and vertical velocity coherences between spatially separated sensors are low inside the canopy. These low coherences are due to the Eulerian length scales being of the same order of magnitude as the separation distances of the anemometers. Phase angles between velocity components are about zero for small separation distances. When the two instruments are separated by 9 m and one instrument is positioned in a row while the other is between two rows, vertical velocities are about 180 deg out of phase and the streamwise velocities are about 40 to 60 deg out of phase. These data support the contention that preferred differences occur between within- and between-row wind flow regimes.     

The characterisation and origin of graphite in cratonic lithospheric mantle: a petrological carbon isotope and Raman spectroscopic study

Graphite-bearing peridotites, pyroxenites and eclogite xenoliths from the Kaapvaal craton of southern Africa and the Siberian craton, Russia, have been studied with the aim of: 1) better characterising the abundance and distribution of elemental carbon in the shallow continental lithospheric mantle; (2) determining the isotopic composition of the graphite; (3) testing for significant metastability of graphite in mantle rocks using mineral thermobarometry. Graphite crystals in peridotie, pyroxenite and eclogite xenoliths have X-ray diffraction patterns and Raman spectra characteristic of highly crystalline graphite of high-temperature origin and are interpreted to have crystallised within the mantle. Thermobarometry on the graphite-peridotite assemblages using a variety of element partitions and formulations yield estimated equilibration conditions that plot at lower temperatures and pressures than diamondiferous assemblages. Moreover, estimated pressures and temperatures for the graphite-peridotites fall almost exclusively within the experimentally determined graphite stability field and thus we find no evidence for substantial graphite metastability. The carbon isotopic composition of graphite in peridotites from this and other studies varies from δ¹³ C_PDB = ? 12.3 to ? ?3.8%o with a mean of-6.7‰, σ=2.1 (n=22) and a mode between-7 and-6‰. This mean is within one standard deviation of the-4‰ mean displayed by diamonds from peridotite xenoliths, and is identical to that of diamonds containing peridotite-suite inclusions. The carbon isotope range of graphite and diamonds in peridotites is more restricted than that observed for either phase in eclogites or pyroxenites. The isotopic range displayed by peridotite-suite graphite and diamond encompasses the carbon isotope range observed in mid-ocean-ridge-basalt (MORB) glasses and ocean-island basalts (OIB). Similarity between the isotopic compositions of carbon associated with cratonic peridotites and the carbon (as CO₂) in oceanic magmas (MORB/OIB) indicates that the source of the fluids that deposited carbon, as graphite or diamond, in catonic peridotites lies within the convecting mantle, below the lithosphere. Textural observations provide evidence that some of graphite in cratonic peridotites is of sub-solidus metasomatic origin, probably deposited from a cooling C-H-O fluid phase permeating the lithosphere along fractures. Macrocrystalline graphite of primary appearance has not been found in mantle xenoliths from kimberlitic or basaltic rocks erupted away from cratonic areas. Hence, graphite in mantle-derived xenoliths appears to be restricted to Archaean cratons and occurs exclusively in low-temperature, coarse peridotites thought to be characteristic of the lithospheric mantle. The tectonic association of graphite within the mantle is very similar to that of diamond. It is unlikely that this restricted occurrence is due solely to unique conditions of oxygen fugacity in the cratonic lithospheric mantle because some peridotite xenoliths from off-craton localities are as reduced as those from within cratons. Radiogenic isotope systematics of peridotite-suite diamond inclusions suggest that diamond crystallisation was not directly related to the melting events that formed lithospheric peridotites. However, some diamond (and graphite?) crystallisation in southern Africa occurred within the time span associated with the stabilisation of the lithospheric mantle (Pearson et al. 1993). The nature of the process causing localisation of carbon in cratonic mantle roots is not yet clearly understood.     

Oxide minerals in a layered kimberlite-carbonate sill from Benfontein,South Africa

The lower sill at Benfontein, South Africa, shows a high degree of magmatic sedimentation to kimberlite, oxide-carbonate, and carbonate layers. The iron-titanium oxide minerals are similar in the carbonate-rich and silicate-rich layers and are represented by titaniferous Mg-Al chromite, Mg-Al titanomagnetite, magnesian ilmenite, rutile, and perovskite. The spinel crystallization trend was toward enrichment in Mg and Ti and depletion in Cr; this trend is similar to that observed in many kimberlites. The ilmenite has Mg and Cr contents within the range observed in kimberlites and lacks the Mn enrichment observed in ilmenites from carbonatites. Perovskite in silicate-rich and carbonate-rich layers shows similar total REE contents and LREE enrichment and lacks the remarkable Nb enrichment observed in perovskite from carbonatites. These new data on the iron-titanium oxide minerals in the lower Benfontein sill do not support a genetic relationship between kimberlites and carbonatites.