Hydrogenases, accessory genes and the regulation of [NiFe] hydrogenase biosynthesis in Thiocapsa roseopersicina

The purple (Sulphur) phototrophic bacterium, Thiocapsa roseopersicina BBS contains several [NiFe] hydrogenases, of which two are membrane bound. Mutant T. roseopersicina cells, carrying deletions in both gene clusters showed hydrogenase activity. This activity was located in the cytoplasm. The structural gene cluster hoxEFUYH was identified and sequenced. In addition, genes homologous to hupUV/hoxBC, the hydrogen sensing hydrogenase have been identified and sequenced.Regulation of hydrogenase biosynthesis was studied in detail for HydSL (renamed HynSL). A random mutagenesis system was optimised for T. roseopersicina. One of the mutations was in a gene similar to that coding for the HypF proteins in other organisms. Inactivation of the hypF gene resulted in a 60-fold increase in hydrogen evolution under nitrogen fixing conditions. In addition to hypF, the following accessory genes were identified: hydD, hupK, hypC1, hypC2, hypDE. Characterisation of the corresponding gene products and search for additional accessory genes are in progress.     

Colour and COD removal from textile effluent by coagulation and advanced oxidation processes

The aim of this study was to compare the performance of coagulation, Fenton's oxidation (Fe²⁺/H₂O₂) and ozonation for the removal of chemical oxygen demand (COD) and colour from biologically pretreated textile wastewater. FeSO₄ and FeCl₃ were used as coagulants at varying doses and varying colour removal efficiency was measured. For the Fenton process, COD and colour removal efficiencies were found to be 78% and 95% for the Fenton process, and to be 64% and 71% for the Fenton-like process (Fe³⁺/H₂O₂), respectively. Ozonation experiments were conducted at different initial pH values and fixed ozone doses. Ozonation resulted in 43% COD and 97% colour removal whereas these rates increased to 54% and 99% when 5 mg/l hydrogen peroxide was added to the wastewater before ozonation at the same dose. The operating costs of all proposed treatment systems were also evaluated in this study.     

On Padé approximations, quadratic stability and discretization of switched linear systems

In this note we consider the stability preserving properties of diagonal Padé approximations to the matrix exponential. We show that while diagonal Padé approximations preserve quadratic stability when going from continuous-time to discrete-time, the converse is not true. We discuss the implications of this result for discretizing switched linear systems. We also show that for continuous-time switched systems which are exponentially stable, but not quadratically stable, a Padé approximation may not preserve stability.     

Gastroprotective effects of herbal medicines (roots)

Herbal medicines are now commonly used all over the world and this has increased global demand. Quality, safety, and efficacy of these drugs have become a serious concern. This review presents the medicinal plants cited in folklore that are used to treat gastrointestinal ulcers. Electronic databases, that is, Web of Science, PubMed, Scopus, and Google Scholar were searched to identify the gastroprotective effects of each plant. Ethnopharmacological studies have reported various botanical products with antiulcer activities, but there has been limited scientific research, presenting clinical data to validate the efficacy and safety of medicinal herbs as gastroprotective agents. Most studies centered on pharmacological properties of medicinal herbs as used animals models. This information has prompted us to compile a list of the medicinal herbs cited in folklore with gastroprotective activity.     

Effects of different agro-industrial waste as substrates on proximate composition,metals, and mineral contents of oyster mushroom (Pleurotus ostreatus)

The use of agro-industrial waste as substrates for mushroom cultivation is considered a promising management strategy for reducing and valorising these wastes, simultaneously reducing the cost of mushroom cultivation. In this study, oyster mushroom Pleurotus ostreatus were cultivated on twelve substrates composed of either tea waste, lime sawdust, alder sawdust, hornbeam sawdust/shaving, wheat stalk-straw, wheat bran or their composite to determine the proximate composition and accumulation of thirteen elements in their fruiting bodies. The proximate composition of P. ostreatus did not show a significant difference, regardless of the employed substrate. (one-way manova ; F_{(66, 107)} = 1.329, Wilk’s λ = 0.041, P > 0.05). However, their chemical element contents show a statistically significant difference (one-way manova ; F_{(132, 418)} = 32.163, Wilk’s λ = 0.000, P < 0.05). These results were supported by discriminant function and principal component analyses. The highest mean concentrations of six of twelve elements (i.e., Ca, Mg, Na, Zn, Cd and Cr) were recorded in P. ostreatus cultivated on the lime-sawdust substrate. Three health indices viz., estimated daily intake, target hazard quotient (THQ) and total THQ were applied to determine the risk to human health via the consumption of P. ostreatus, suggesting that they are safe for human consumption.     

Biodiesel Feedstock from Emulsions Produced by Aqueous Processing of Yellow Mustard

The multi-stage treatment of stable oil-in-water emulsions produced during non-enzymatic aqueous processing of dehulled yellow mustard flour with cyclic ethers [tetrahydrofuran (THF) and 1,4-dioxane] was investigated to produce a single-phase oil-solvent-water miscella suitable for biodiesel production. While the single-stage treatment of yellow mustard emulsion recovered 97 % and 95 % of the oil by using 4:1 THF:oil and 9:1 dioxane:oil weight ratios, respectively, miscella phases containing more than 7 % water formed, which made them unsuitable as biodiesel feedstock. Multi-stage treatments of the emulsion using lower THF:oil and dioxane:oil weight ratios were further developed to produce oil-solvent-water miscella phases with low water content. While three-stage extraction of emulsions using 0.5:1, 1:1, 1.5:1, and 2:1 dioxane:oil weight ratios did not destabilize the emulsion, three-stage extraction using 0.5:1 and 0.75:1 THF:oil weight ratios effectively recovered over 97 % of the oil, resulting in the production of oil-rich miscella phases containing only 1 % and 1.5 % water, respectively. These miscella phases were analyzed for free fatty acid and phosphorus contents and proved to be excellent feedstocks for the preparation of high-purity methyl esters through single-phase base-catalyzed transmethylation.     

A sight on the current nanoparticle-based gene delivery vectors

Nowadays, gene delivery for therapeutic objects is considered one of the most promising strategies to cure both the genetic and acquired diseases of human. The design of efficient gene delivery vectors possessing the high transfection efficiencies and low cytotoxicity is considered the major challenge for delivering a target gene to specific tissues or cells. On this base, the investigations on non-viral gene vectors with the ability to overcome physiological barriers are increasing. Among the non-viral vectors, nanoparticles showed remarkable properties regarding gene delivery such as the ability to target the specific tissue or cells, protect target gene against nuclease degradation, improve DNA stability, and increase the transformation efficiency or safety. This review attempts to represent a current nanoparticle based on its lipid, polymer, hybrid, and inorganic properties. Among them, hybrids, as efficient vectors, are utilized in gene delivery in terms of materials (synthetic or natural), design, and in vitro/in vivo transformation efficiency.     

Gold‐supported activated NiZn coatings: hydrogen evolution and corrosion studies

Gold‐supported Raney‐type NiZn coatings were prepared on a thin Ni film‐modified copper substrate (Cu/Ni/NiZn‐Au). The hydrogen evolution activity, time stability and corrosion behaviour of the electrode was investigated in 1 M KOH solution by electrochemical, microscopic and spectroscopic technique. It was found that Au‐modified activated coatings exhibits good hydrogen evolution activity, electrochemical and physical stability as well as corrosion resistance. The enhanced hydrogen evolution activity of the Au‐modified electrode was related to the larger available surface area and/or a possible synergistic effect between the metals. Copyright © 2017 John Wiley & Sons, Ltd.     

Quality assessment of surface and groundwater in Solaklı Basin (Trabzon, Turkey)

The paper reports a study of the surface and ground water in Solakl? Basin, Trabzon, from an assessment of 33 sampling points. Many of the parameters analysed are only marginally acceptable as potable water, even though the samples were collected during the wet season. The highest concentrations of contaminants were found downstream of the centres of population. The results indicate regular monitoring is required and some measures should be taken to protect the limited resources.     

Enhancing Effect of Calix[4]arene Amide Derivatives on Lipase Performance in Enantioselective Hydrolysis of Racemic Arylpropionic Acid Methyl Esters

Calix[4]arene amide derivatives were employed as new additives within the sol-gel encapsulation of lipase from Candida rugosa (CRL) to improve its catalytic properties. Evaluation of catalytic activity of the encapsulated lipases was acheived by enantioselective hydrolysis of both racemates, Naproxen methyl ester and 2-phenoxypropionic acid methyl ester, in aqueous buffer solution/isooctane reaction system. Results show that enantioselectivity was improved by using calix[4]arene amide derivatives-based encapsulated lipases. The reaction of naproxen methyl ester resulted in 47.6% conversion (x) in 24 h with 88.9% enantiomeric excess of substrate (ee_s), analogous to an enantioselectivity (E) value of 297 (E = 137 for the encapsulated free enzyme). The conversion of 2-phenoxypropionic acid methyl ester, obtained was 48.4% with E value of 327, enantiomeric excess of substrate (ee_s) of 92% for the reaction time of 1 h (E = 211 for the encapsulated free enzyme).