Parallel color-coding

We present new parallelization and memory-reducing strategies for the graph-theoretic color-coding approximation technique, with applications to biological network analysis. Color-coding is a technique that gives fixed parameter tractable algorithms for several well-known NP-hard optimization problems. In this work, by efficiently parallelizing steps in color-coding, we create two new biological protein interaction network analysis tools: Fascia for subgraph counting and motif finding and FastPath for signaling pathway detection. We demonstrate considerable speedup over prior work, and the optimizations introduced in this paper can also be used for other problems where color-coding is applicable.     

Inexact subgraph isomorphism in MapReduce

Inexact subgraph matching based on type-isomorphism was introduced by Berry et al. [J. Berry, B. Hendrickson, S. Kahan, P. Konecny, Software and algorithms for graph queries on multithreaded architectures, in: Proc. IEEE International Parallel and Distributed Computing Symposium, IEEE, 2007, pp. 1–14] as a generalization of the exact subgraph matching problem. Enumerating small subgraph patterns in very large graphs is a core problem in the analysis of social networks, bioinformatics data sets, and other applications. This paper describes a MapReduce algorithm for subgraph type-isomorphism matching. The MapReduce computing framework is designed for distributed computing on massive data sets, and the new algorithm leverages MapReduce techniques to enable processing of graphs with billions of vertices. The paper also introduces a new class of walk-level constraints for narrowing the set of matches. Constraints meeting criteria defined in the paper are useful for specifying more precise patterns and for improving algorithm performance. Results are provided on a variety of graphs, with size ranging up to billions of vertices and edges, including graphs that follow a power law degree distribution.     

Perceptual grouping of line features in 3-D space: a model-based framework

In this paper, we propose a novel model-based perceptual grouping algorithm for the line features of 3-D polyhedral objects. Given a 3-D polyhedral model, perceptual grouping is performed to extract a set of 3-D line segments which are geometrically consistent with the 3-D model. Unlike the conventional approaches, grouping is done in 3-D space in a model-based framework. In our unique approach, a decision tree classifier is employed for encoding and retrieving the geometric information of the 3-D model. A Gestalt graph is constructed by classifying input instances into proper Gestalt relations using the decision tree. The Gestalt graph is then decomposed into a few subgraphs, yielding appropriate groups of features. As an application, we suggest a 3-D object recognition system which can be accomplished by selecting a best-matched group. In order to evaluate the performance of the proposed algorithm, experiments are carried out on both synthetic and real scenes.     

基于VC++6.0多媒体CAI课件中动画制作的研究

本文介绍了动画设计的基本原理，讨论了Windows位图的显示原理和显示方法。以一个动画制作的程序实例，详细叙述了使用VC 6.0设计多媒体动画软件的方法。     

基于路径映射的相似子图匹配算法

迄今为止,相关的图相似性匹配方法通常不考虑节点关系以及边权重的实际意义。提出一种基于路径映射 的相似子图匹配方法,用以更精确地查找具有相似拓扑结构的加权图。其创新之处在于充分利用标签信息,综合考虑 拓扑结构特征,克服了忽略节点结构关系和边权重的意义去分析图相似性的弊端。因此,该方法在很大程度上提高了 图相似性匹配的应用范围和匹配精度。实验表明本方法具有较高的查询质量和效率。     

Querying massive graph data: A compress and search approach

Querying graph data is a fundamental problem that witnesses an increasing interest especially for massive graph databases which come as a promising alternative to relational databases for big data modeling. In this paper, we study the problem of subgraph isomorphism search which consists to enumerate the embedding of a query graph in a data graph. The most known solutions of this NP-complete problem are backtracking-based and result in a high computational cost when we deal with massive graph databases. We address this problem and its challenges via graph compression with modular decomposition. In our approach, subgraph isomorphism search is performed on compressed graphs without decompressing them yielding substantial reduction of the search space and consequently a significant saving in processing time as well as in storage space for the graphs. We evaluated our algorithms on nine real-word datasets. The experimental results show that our approach is efficient and scalable.     

An aerial image recognition framework using discrimination and redundancy quality measure

Aerial image categorization plays an indispensable role in remote sensing and artificial intelligence. In this paper, we propose a new aerial image categorization framework, focusing on organizing the local patches of each aerial image into multiple discriminative subgraphs. These meaningful subgraphs reflect both the geometric property and the color distribution of an aerial image. First, each aerial image is decomposed into a collection of regions in terms of their color intensities. Thereby region connected graph (RCG), which models the connection between the spatial neighboring regions, is constructed to encode the spatial context of an aerial image. Second, a novel subgraph mining technique is adopted to discover the frequent structures in the RCGs constructed from the training aerial images. Thereafter, a set of refined structures is selected among the frequent ones toward being highly discriminative and low redundant. Lastly, given a new aerial image, its sub-RCGs corresponding to the refined structures are extracted. They are further quantized into a discriminative vector for SVM classification. Thorough experimental results validate the effectiveness of the proposed method. In addition, the visualized mined subgraphs show that the discriminative topologies of each aerial image are discovered.     

基于判别性子图重构的轻微肝性脑病分类*

大量研究表明轻微肝性脑病(MHE)与脑功能网络的异常相关,但难于寻找与MHE相关的异常子网络。为了解决这个问题,文中提出判别性子图重构的方法用于寻找与MHE相关的子网络,并将子网络用于MHE的分类。首先分别从MHE病人和非MHE(NMHE)病人的功能网络中挖掘一组频繁子图。然后,从频繁子图中挑选判别性子图用于重构原网络,并将判别性子图合并用于重构原网络。最后,使用图核计算重构网络之间的相似性,并使用核SVM分类。在包括77位肝硬化病人的数据集上的实验获得较高的分类精度,从而验证方法的有效性。     

求解连通无向简图的所有连通子图的算法及其应用

讨论了求解连通无向简图的所有连通子图的算法，并将其应用于化学领域：如何将许多具有某种共同属性的物质的分子结构图形分解成子分子结构，进一步地试图找出存在于大多数具有该属性的物质中的子分子结构，并讨论这样的子分子结构导致物质具有该共同属性的概率。     

频繁子图挖掘算法综述

本文介绍了基于图的频繁子图挖掘算法的研究情况,提出频繁子图挖掘算法的分类方法,对一些经典的算法进行了分析和评价,归纳出频繁子图挖掘的一般步骤以及实现这些步骤的方法,展望了频繁子图挖掘的未来研究方向.