Association of TALS developmental disorder with defect in minor splicing component U4atac snRNA

The spliceosome, a ribonucleoprotein complex that includes proteins and small nuclear RNAs (snRNAs), catalyzes RNA splicing through intron excision and exon ligation to produce mature messenger RNAs, which, in turn serve as templates for protein translation. We identified four point mutations in the U4atac snRNA component of the minor spliceosome in patients with brain and bone malformations and unexplained postnatal death [microcephalic osteodysplastic primordial dwarfism type 1 (MOPD 1) or Taybi-Linder syndrome (TALS); Mendelian Inheritance in Man ID no. 210710]. Expression of a subgroup of genes, possibly linked to the disease phenotype, and minor intron splicing were affected in cell lines derived from TALS patients. Our findings demonstrate a crucial role of the minor spliceosome component U4atac snRNA in early human development and postnatal survival.     

Gastrointestinal Protozoal Diseases in Reptiles

This article outlines the principal gastrointestinal protozoal diseases that have been recorded as affecting reptiles. It covers 9 genera of flagellates/amoebae, 1 ciliate genus, and 5 genera of coccidia, describing their pertinent anatomy and what is known about their epidemiology, including clinical presenting signs and intestinal pathological changes. The agents are initially discussed individually and, to avoid repetition, common information about diagnostics, treatment, and control is then presented.     

A remote irrigation monitoring and control system (RIMCS) for continuous move systems. Part B: field testing and results

Precision irrigation systems can have inherent errors that affect the accuracy of variable water application rates controllers, as well as affect the controllers’ performance when evaluated on different continuous move irrigation systems configurations. The objective of this study was to assess the performance of a remote irrigation monitoring and control system (RIMCS) installed on two separate linear move (LM) irrigation systems. The RIMCS varies water application rates by pulsing nozzles controlled by solenoids connected via relays to a single board computer (SBC) with wireless Ethernet connection to a remote server. The system also monitors irrigation system flow, pressure, position and wireless field sensor networks. The system was installed on a LM irrigation system in Prosser, Washington, USA and on a LM in the Nesson Valley of North Dakota, USA. For the LM at Prosser, four pre-defined irrigation patterns were imposed and variable rates were applied as a percentage of the nozzle base application rate. Each nozzle was pulsed across the span length and along the LM travel direction. For the LM at the Nesson Valley, a quadratic pattern was imposed pulsing banks of nozzles along the LM travel direction. Standard catch can tests were performed and the system performance was evaluated by comparing measured catch can water depths with pre-determined target values. The RIMCS accuracy was found to be in the range of the LM uniform water depth application uniformity coefficients of 88–96%. The RIMCS was successfully transferred to another LM in North Dakota as indicated by the relatively low variable rate application errors of –8.8 ± 8.1% and −0.14 ± 6.7% for the two spans.     

Ground-Sensor Soil Reflectance as Related to Soil Properties and Crop Response in a Cotton Field

Bare soil reflectance from airborne imagery or laboratory spectrometers has been used to infer soil properties such as soil texture, organic matter, water content, salinity and crop residue cover. However, the relation of soil properties to reflectance data often varies with soil type and conditions and surface reflectance may not be representative of the conditions in the root zone. The objectives of this study were to assess the soil reflectance data obtained by ground-based sensors and to model soil properties in the root zone as a function of surface soil reflectance and plant response. Ground-based sensors were used to simultaneously monitor soil and canopy reflectance in the visible and near-infrared (VNIR) along six rows and in two growth stages in a 7 ha cotton field. The reflectance data were compared to soil properties, leaf nutrients and biomass measured at 33 sampling positions along the rows. Brightness values of the blue and green bands of soil reflectance were better correlated to soil water content, particulate organic matter and extractable potassium and phosphorus, while those in the red and NIR bands were correlated to soil carbonate content, total nitrogen, electrical conductivity and foliar nutrients. The correlation of red soil reflectance with canopy reflectance was significant and indicated an indirect inverse relationship between soil fertility and plant stress. The integration of surface soil reflectance and plant response variables in a multiple regression model did not substantially improve the prediction of soil properties in the root zone. However, crop nutrient status explained a significant portion of the spatial variability of soil properties related to nitrification processes when soil reflectance did not. The implication of these findings to agricultural management is discussed.     

Loss of genetic diversity due to fishing pressure

Loss of genetic diversity in the orange roughy, Hoplostethus atlanticus, caught off New Zealand, was measured by gel electrophoresis of nine polymorphic enzyme loci. There has been a significant reduction in genetic diversity on three spawning sites over the past 6 years, during which time the virgin biomass has been reduced by 70%. It is suggested that fishing activities which concentrate on spawning populations differentially remove the older and more heterozygous individuals from the virgin stock. Commercial fishing activities may have had significant genetic effects on fish stocks without reducing them to near-extinction levels.     

Biochemical evaluation of mitochondrial respiratory chain enzymes in canine skeletal muscle

OBJECTIVE: To perform respiratory chain enzymatic activity assays on canine skeletal muscle biopsy specimens and establish reference range values of skeletal muscle enzyme activities for dogs. SAMPLE POPULATION: Biopsy specimens from the vastus lateralis muscle were obtained from 24 dogs (8 sexually intact males and 14 sexually intact females) ranging from 15 months to 6 years of age. PROCEDURE: Mean values of citrate synthase, cytochrome-c oxidase, succinate dehydrogenase, succinate dehydrogenase-cytochrome-c reductase, nicotinamide adenine dinucleotide (NADH) dehydrogenase, and NADH dehydrogenase-cytochrome-c reductase activities were established by use of 6 standard spectrophotometric assays for respiratory chain enzyme analysis. RESULTS: Compared with published data for skeletal muscle enzyme activities in humans, skeletal muscle enzyme activities in dogs were 2- to 4-fold higher. Additionally, citrate synthase activity, a marker for mitochondrial volume, was positively correlated with age in dogs, suggesting that mitochondrial volume increases with age, although no apparent change in respiratory chain enzymatic activity with an increase in age was found. CONCLUSIONS AND CLINICAL RELEVANCE: Reference range values for skeletal muscle enzyme activities of dogs are needed to accurately interpret results of respiratory chain enzymatic activity assays. During investigation of metabolic myopathies, if skeletal muscle biopsy specimens are evaluated for respiratory chain enzyme kinetics, they should be performed and evaluated in concert with skeletal muscle biopsy specimens from clinically normal animals of the same species.