Effects of Rosemary (Rosmarinus officinalis) extract on growth,blood biochemistry,immunity, antioxidant,digestive enzymes and liver histopathology of rainbow trout,Oncorhynchus mykiss

This research was designed to determine the effects of rosemary (Rosmarinus officinalis) extract on growth, blood biochemistry, immunity, antioxidant, digestive enzymes and liver histopathology of rainbow trout. In a 40‐day diet experiment, rainbow trout was fed with the experimental diets containing 0.4, 0.7, 1 and 3 g/kg of rosemary. 0.4 and 0.7 g/kg rosemary extracts had no significant effect on all parameters studied (p > .05). The growth performance (SGR and WG) and feed utilization (FCR and FER) of the fish increased with the increase in the rate of rosemary in the feed (p < .001). Additionally, only the final weight levels were significant at the linear level (p < .05). Rosemary's 1 and 3 g/kg doses increased total protein, trypsin, amylase, lipase, superoxide dismutase (SOD), catalase (CAT), lysozyme, total immunoglobulin (IG) and white blood cell (WBC) levels when compared to control group. However, glucose, aspartate aminotransferase (AST), alanine aminotransferase (ALT), total cholesterol and triglyceride levels decreased significantly (p < .001). Moreover, these doses of rosemary caused a significant reduction in steatosis of liver hepatocytes compared to the control group. In conclusion, the present study showed that rosemary may be useful in reducing the stress effects by increasing the growth, antioxidant, digestive enzymes and immunity levels, as well as reducing the rate of steatosis in the liver of rainbow trout.     

A promising biosorbent for biosorption of a model hetero-bireactive dye from aqueous medium

In this study, residual shell biomass of Corylus avellana L. was used as potential biosorbent for biosorption of a model industrial hetero-bireactive dye. The biosorbent was characterized by FTIR and SEM. The batch biosorption studies were performed as a function of dye concentration and contact time. The biosorption of dye was found to be very quick. Various kinetic and isotherm models were used to evaluate the obtained experimental data. The biosorption kinetic was best represented by the pseudo-second-order model while the biosorption equilibrium was best described by Langmuir model. The maximum dye biosorption capacity of biosorbent based on Langmuir isotherm was obtained as 74.527 mg g^-1. These results showed that the use of such plant waste biomass in biosorption system could be a feasible method for the removal of such recalcitrant dye from industrial effluents to reduce operating costs.     

Phosphate solubilization potentials of soil Acinetobacter strains

Many phosphate solubilizing microorganisms (PSM) require external pyrroloquinoline quinone (PQQ) for strong phosphorus (P) solubilization in vitro. The objective of this study was to isolate efficient and PQQ-independent PSM. A total of 21 PSM were isolated from the rhizosphere soil of wheat and maize grown in the pots. Acinetobacter strains were the only PQQ-independent and most effective solubilizers of tricalcium phosphate containing agar. The mean P dissolved in liquid cultures of Acinetobacter strains in a 5-day incubation ranged from 167 to 888 μg/ml P. The pH dropped to below 4.7 from 7.8 in six isolates, which produced gluconic acid in concentrations ranging between 27.5 and 37.5 mM. There was a linear regression between soluble P and gluconic acid concentrations in the bacterial cultures (P < 0.05; R ² = 0.59). Inoculation with Acinetobacter sp. WR922 significantly (P < 0.05) increased wheat (Triticum aestivum L.) P content by 27% at 15 days after emergence (DAE) and dry matter by 15% at 30 DAE compared to the control. The plant P content in inoculated plants at 30 DAE was linearly correlated with soluble P of the bacterial cultures (P < 0.05; R ² = 0.69). Gluconic acid production directly affected phosphate solubilization in vitro, which in turn influenced plant P content of inoculated plants in PQQ-independent P-solubilizing Acinetobacter strains.     

Vegetative compatibility groups in <Emphasis Type="Italic">Verticillium dahliae</Emphasis> isolates from olive in western Turkey

Verticillium wilt, caused by Verticillium dahliae, is the most serious disease in olive cultivation areas in western Turkey. Two hundred and eight isolates of V. dahliae from olive (Olea europea var. sativa) trees were taken for vegetative compatibility analysis using nitrate non-utilizing (nit) mutants. One isolate did not produce a nit mutant. Nit mutants of 207 isolates were tested against tester strains of internationally known vegetative compatibility groups (VCGs) 1A, 2A, 2B, 3, 4A and 4B, and also paired in many combinations among themselves. One hundred and eighty nine of the isolates (90.9%) were strongly compatible with T9, the tester strain of VCG1A, and thus were assigned to VCG1A. Eight isolates were assigned to VCG2A and four isolates to VCG4B. One isolate was heterokaryon self-incompatible (HSI) and five isolates could not be grouped to any of the VCGs tested. Pathogenicity assays were conducted on a susceptible olive cultivar (O. europea cv. Manzanilla) and a susceptible local cotton cultivar (Gossypium hirsutum cv. Çukurova 1518). Both cotton and olive inoculated with all VCG1A isolates showed defoliating symptoms in greenhouse tests. This is the first report on VCGs in V. dahliae from olive trees in Turkey which demonstrates that VCG1A of the cotton-defoliating type is the most commonly detected form from olive plants in the western part of Turkey.     

Exploration of biosorption potential of forest industry by-product for removal of reactive dye from aqueous solution

Natural sawdust of Calabrian pine was explored as low-cost industrial by-product for a hetero-bireactive dye removal from aqueous solution in this study. Batch experiments were carried out to investigate the effects of contact time and dye concentration on biosorption efficiency. Maximum biosorption amounts were achieved almost in the 20-30 min of contact for the studied dye range (50-200 mg l ^-1). An increase in the dye concentration resulted in decrease in the percent dye removal and increase in the biosorption capacity of biosorbent. Different kinetic and isotherm models were used to examine the biosorption experimental data for elucidating the dye removal mechanism. The equilibrium data were best represented by Freundlich isotherm model confirming multilayer coverage. The kinetics of dye biosorption best obeyed the pseudo-secondorder equation. The negative value of standard Gibbs free energy change (-3.61 kJ mol^-1) indicated that physical forces were involved in the spontaneous dye biosorption. Thus, the sawdust as a possible non-conventional biosorbent presented an interesting option for bioremediation of contaminated environments by such unsafe dyes.     

Investigation of the Origanum onites L. essential oil using the chorioallantoic membrane (CAM) assay

The in vivo test on the chorioallantoic membrane of the fertilized hen's egg (CAM assay) is a current method to determine antiangiogenic, antiinflammatory activity and toxic effects of individual compounds or complex plant extracts. The method is used for testing natural compounds in small amounts for revealing various modes of action and the complex mechanisms related to angiogenesis and inflammation. Furthermore, possible side effects such as membrane irritation, toxic, and anticoagulant properties of the investigated material in question can be detected. For the evaluation, the essential oil obtained by hydrodistillation of the aerial parts of Origanum onites L., a common spice and medicinal plant, was tested for its effect in the chorioallantoic membrane (CAM) assay. The essential oil composition was revealed by means of gas chromatography-mass spectrometry (GC-MS). Eighty three components were identified, representing 99.1% of the total oil. Carvacrol, thymol, p-cymene, and gamma-terpinene were found as major components and were also individually tested in the CAM assay. Along with the monoterpenes carvacrol and thymol, their methyl ether derivatives were also examined for comparison of their physiological action. Neither the essential oil nor its components showed any pronounced antiinflammatory or antiangiogenic property in the CAM assay, at 10-250 microg/pellet. However, the irritant effect of the essential oil was linked to thymol in a dose-response fashion, up to 10 microg/pellet, where it was still showing irritation.     

Micronutrient composition of field‐grown dry bean and wheat inoculated with Azospirillum and Trichoderma

Micronutrient deficiency and malnutrition in humans are severe problems in many developing countries, particularly in areas with calcareous soils. There is almost no information on whether inoculation with plant growth–promoting Azospirillum and/or Trichoderma can help to reduce this problem by increasing the mineral concentration of the seeds. Field experiments were conducted in Tokat (Turkey) in 2001–2002 to determine whether inoculation with Azospirillum brasilense, Trichoderma harzianum, sole or in combination, and/or the application of P fertilizers can enhance micronutrient concentrations of field‐grown bean (Phaseolus vulgaris) and wheat (Triticum aestivum). In beans, Azospirillum inoculation combined with P fertilization significantly (p < 0.05) increased seed concentrations of Mn, Zn, and Cu, from 8.8, 22.6, and 7.0 mg kg^–1 in the control to 10.3, 28.3, and 11.0 mg kg^–1, respectively. Trichoderma inoculation alone significantly (p < 0.05) reduced the concentrations of Fe, Mn, Zn, and Cu and the cumulative plant uptake of Fe and Zn in 45‐day‐old bean plants. However, it significantly (p < 0.05) increased bean‐seed Cu content and accumulation. The double inoculation resulted in significantly (p < 0.05) higher micronutrient concentrations than Trichoderma inoculation alone in 45‐day‐old plants. In contrast to beans, the effects of microbial inoculations were less in wheat. However, dual inoculation significantly (p < 0.05) increased Zn content by 45% and Zn accumulation by 40% above the uninoculated control. Inoculation with plant growth–promoting microorganisms appears to be a promising strategy to combat micronutrient deficiencies.     

Photo-Degradation of Some Dyes using Ag-Loaded Titaniumdioxide

The photocatalytic degradation of organic dyes using TiO₂ andsilver-loaded TiO₂ has beenstudied. The dyes which were chosen (methyl violet, a cationicdye; Cibacron Blue FMR, areactive dye; and Maxilon Red GRL, a mono azo basic dye)represent the major structuralfamilies of organic dyes. Ag-loading dramatically reduceddegradation time. While theundoped TiO₂ degraded about 63% of the total amount ofmethyl violet within 4 min,degradation rose to 95% with Ag-loaded TiO₂ within the sametime period. The photo-decomposition of dyes was monitored as a function of pH anddissolved organic and inorganic matters.     

Ameliorative effect of lycopene on antioxidant status in Cyprinus carpio during pyrethroid deltamethrin exposure

The aim of the present study was to investigate the ameliorative properties of lycopene against the toxic effects of deltamethrin (DM) by examining oxidative damage markers such as lipid peroxidation and the antioxidant defense system components in carp (Cyprinus carpio). The fish were divided into seven groups of 15 fish each and received the following treatments: Group 1, no treatment; Group 2, orally administered corn oil; Group 3, oral lycopene (10 mg/kg body weight); Group 4, exposure to 0.018 μg/L DM; Group 5, exposure to 0.018 μg/L DM plus oral administration of 10 mg/kg lycopene; Group 6, exposure to 0.036 μg/L DM; and Group 7, exposure to 0.036 μg/L DM plus oral administration of 10 mg/kg lycopene. Treatment was continued for 14 days, and at the end of this period, blood and tissue (liver, kidney, and gill) samples were collected. Levels of malondialdehyde (MDA) and reduced glutathione (GSH) as well as superoxide dismutase (SOD), catalase (CAT), and glutathione peroxidase (GSH-Px) activities were determined in blood and tissues for measurement of oxidant-antioxidant status. A significant elevation in the level of MDA, as an index of lipid peroxidation, and reductions in antioxidant enzyme activities (SOD, CAT, and GSH-Px) and low molecular weight antioxidant (GSH) levels were observed in DM-exposed fish. Treatment with lycopene attenuated the DM-induced oxidative stress by significantly decreasing the levels of MDA. In addition, lycopene significantly increased the SOD, CAT, and GSH-Px activities and the level of GSH. The present results suggest that administration of lycopene might alleviate DM-induced oxidative stress.     

Identification of reference genes for real-time quantitative polymerase chain reaction based gene expression studies on various Olive (Olea europaea L.) tissues

Reference genes are essential for the normalisation of the expression data of quantitative real-time PCR for the purposes of validation. Although several reference genes have been validated for the olive, comprehensive analyses including an excessive number of candidate reference genes still require study in various olive tissue samples. In this work, a total of 40 candidate reference genes were tested for their stability in 8 different olive tissues (root, apical bud, lateral bud, pedicel, young leaf, mature leaf, fruit mesocarp, and seed) with the utilisation of the most popular software programs including GeNorm, NormFinder, BestKeeper, and ΔC_t. The analyses of expression stability of candidate reference genes using quantitative real-time PCR demonstrated ubiquitin-conjugating enzyme (UBC1) as the most stable reference gene for the studied tissues of the olive. The GeNorm software also calculated the optimum reference gene combinations as two which consist of UBC1 and the Clathrin adaptor complex medium subunit (CLATHRIN) genes. This study provides the most stable reference gene combination for normalisation of target genes for quantitative real-time PCR gene expression studies on the olive.