环介导等温扩增技术检测肉及肉制品中沙门氏菌

建立用环介导等温扩增技术(loop-mediated isothermal amplification,LAMP)检测肉及肉制品中沙门氏菌的方法。利用靶基因的6 个区段设计4 条引物,应用具有链置换活性的Bst DNA 聚合酶,能够在恒温(65℃左右)条件下特异、高效、快速地扩增待测物的DNA。针对沙门氏菌的特异基因invA 基因设计两对LAMP 引物,建立LAMP 检测沙门氏菌的新方法,并对肉及肉制品中的沙门氏菌进行检测。结果表明：建立LAMP 技术检测肉及肉制品中沙门氏菌的方法,该方法能够特异检测沙门氏菌,且灵敏性可达10-9CFU/mL,对48 份样品检测,该方法检出率为91.6%、敏感性100%、特异性70.0%、符合率为93.8%、检出时间1.5h。     

Rapid detection of Listeria monocytogenes in raw milk with loop-mediated isothermal amplification and chemosensor

Loop-mediated isothermal amplification (LAMP) allows a rapid amplification of nucleic acids under isothermal conditions. It can be combined with a rhodamine-based dual chemosensor for much more efficient, field-friendly detection of Listeria monocytogenes. In this report, LAMP was performed at 63 °C for 10 min, followed by a rapid reaction of DNA amplification and the byproduct, pyrophosphate ion, with a rhodamine-based dual chemosensor and Cu(2+) is visualized as a disappearance of red color. The detection limit of L. monocytogenes by the LAMP-chemosensor was 8 to 10 cells per reaction tube, and the total assay time including 10 min for rapid DNA extraction was approximately 30 min. Data on naturally contaminated raw milk samples indicated that the LAMP method was highly specific and sensitive, giving 100% concordance with the ISO 10560 reference method. The results showed that the LAMP-chemosensor method has the advantages of better sensitivity and speed and less dependence on equipment than the standard Polymerase Chain Reaction for specifically detecting low levels of L. monocytogenes DNA, and this can be useful in the field as a routine diagnostic tool. PRACTICAL APPLICATION: The LAMP-chemosensor method reported here provided a powerful tool for detection of L. monocytogenes in raw milk samples due to its specificity, sensitivity, and rapidity.     

环介导等温扩增技术检测转基因组分的研究进展

随着越来越多的转基因作物获得商业化生产和种植,转基因农产品的安全问题一直都有异议,因此,无论对消费人群还是政府监管部门,快速检测转基因组分都是非常必要。转基因组分的检测通常以核酸为基础进行检测,而环介导等温扩增技术(LAMP)是一种等温条件下核酸扩增技术,具有高特异性、高灵敏度、操作简单、成本低廉、结果可视化及不需要专用设备的特点,已逐渐用于转基因组分的检测中。本文针对LAMP技术的原理、优点、关键技术及其在转基因大豆、玉米、水稻等农产品中的应用做一综述,从而为其更广泛的用于转基因组分的检测提供理论依据。     

环介导等温扩增技术在食品安全检测领域的应用研究进展

环介导等温扩增技术(Loop-mediated isothermal amplification,LAMP)是近年发展起来的一种新型核酸检测技术。其采用特异识别靶序列上6个位点的4条引物和一种具有链置换活性的DNA聚合酶,在等温条件下进行核酸扩增,与传统核酸检测技术(PCR法、实时荧光定量PCR法)相比,具有操作简单、特异性强、灵敏度高、可肉眼判读结果等优点。核酸检测是食品安全检测技术的一个重要手段,本文综述了LAMP技术在食品微生物检测、转基因成分检测、过敏原成分检测和动物源性成分检测领域的应用研究进展,探讨了LAMP技术在食品检测领域的发展前景,以期为食品快速、高通量检测技术建立提供参考。     

核酸检测技术检测肉类种源研究进展

肉及肉制品是人类重要的食物来源, 为人体提供必要的营养素。但是以经济为目的的肉制品掺假, 是食品安全中屡禁不止的全球性问题。快速、准确、有效的检测技术是有效监督肉类掺假的关键。本文综述了核酸检测技术中热循环扩增技术(如普通PCR、实时PCR、多重PCR)和等温扩增技术[如环介导等温扩增(loop-mediated isothermal amplification, LAMP)技术、重组酶聚合酶扩增(recombinase polymerase amplification, RPA)技术、滚环扩增(rolling circle amplification, RCA)技术、交叉引物等温扩增(cross prime amplification, CPA)技术等]的原理及在肉类种源鉴别中的应用。提出梯型熔解温度等温扩增(ladder-shape melting temperature isothermal amplification, LMTIA)技术, 以期推进核酸检测技术的研究及在肉制品领域的应用。在肉类种源的检测中, 实时荧光定量PCR技术、跨越式滚环等温扩增(saltatory rolling circle amplification, SRCA)技术等均能检出0.01%的掺伪, 可用于定量检测, 表明这些核酸技术在肉类种源检测中有很好的应用前景。     

Loop-mediated isothermal amplification-based microfluidic chip for pathogen detection

Abstract

Due to the significant growth of food production, the potential likelihood of food contamination is increasing. Foodborne illness caused by bacterial pathogens has considerably increased over the past decades, while at the same time, the species of harmful microorganisms also varied. Conventional bacterial culturing methods have been unable to satisfy the growing requirement for food safety inspections and food quality assurance. Therefore, rapid and simple detection methods are urgently needed. The loop-mediated isothermal amplification (LAMP) technology is a highly promising approach for the rapid and sensitive detection of pathogens, which allows nucleic acid amplification under isothermal conditions. The integration of the LAMP assay onto a microfluidic chip is highly compatible with point-of-care or resource-limited settings, as it offers the capability to perform experiments in combination with high screening efficiency. Here, we provide an overview of recent advances in LAMP-based microfluidic chip technology for detecting pathogens, based on real-time or endpoint determination mechanisms. We also discuss the promoting aspects of using the LAMP technique in a microfluidic platform, to supply a guideline for further molecular diagnosis and genetic analysis.     

Isolation and Detection of Extended Spectrum β‐Lactamase (ESBL)‐Producing Enterobacteriaceae from Meat using Chromogenic Agars and Isothermal Loop‐Mediated Amplification (LAMP) Assays

The aim of this work was to develop a molecular method using loop‐mediated isothermal amplification (LAMP) for detection of extended spectrum β‐lactamase (ESBL)‐producing Enterobacteriaceae from meat, and to compare it with different isolation agars and microarrays. LAMP assays were developed for CTX‐M groups 1, 2, and 9 and OXA‐10‐like genes. Chicken, lamb, beef, pork, and turkey samples were spiked with 10, 100, and 1,000 cfu/gram using 8 strains of ESBL‐producing Enterobacteriaceae (CTX‐M sequence types 1, 2, 3, 14, 15, OXA‐11, SHV‐2, TEM‐52) +/– a mix of competitor organisms. Samples were enriched overnight in buffered peptone water (BPW) +/– antibacterials before plating to CHROMagar CTX, OXOID ESBL Brilliance agar, and MacConkey agar with 1 mg/L cefotaxime. Selected BPW broths were also tested using LAMP assays, microarrays and using cefpodoxime discs on agar. For isolation/detection of ESBL producers from beef, pork, lamb, and turkey spiked with 10 or 100 cfu/gram ESBL (natural flora only), all agars and the LAMP assays showed 100% sensitivity and specificity for ESBL spike strains. For chicken samples, both LAMP and chromogenic agars showed improved sensitivity and specificity for isolation of ESBLs compared with MacConkey agar, particularly with competitor bacteria added. In comparison, the cefpodoxime disc method and microarray showed reduced sensitivity.     

环介导恒温扩增法检测肉制品中致病微生物

目的:建立一种食品中微生物核酸快速检测技术,在此基础上开发的简便、快速、灵敏,不依赖仪器适合基层应用的核酸快速检测试剂盒;并探索该试剂盒在肉及肉制品微生物检测中的应用。方法:根据单核细胞增生李斯特氏菌特有的靶序列vir R基因设计引物,采用环介导恒温扩增技术构建检测体系,优化、验证检测的特异度、检出限等指标,并与传统分离培养法比较。结果:本研究中的检测方法及试剂盒能专一的检出肉制品中的单增李斯特菌,对其他近源菌株检测呈阴性结果,检出限达1.81×103CFU/mL,与传统方法具有相同的灵敏度;检测操作简便快速,极少的设备依赖,适合规模推广。     

Development of a Rapid Method for the Visible Detection of Pork DNA in Halal Products by Loop-Mediated Isothermal Amplification

Disclosing the composition of meat products in detail is essential to consumers’ rights. In this study, we developed a rapid method based on loop-mediated isothermal amplification to visibly identify pork DNA in meat products. Four pig specific primers were designed according to the mitochondrial DN1 gene sequence. The analytical sensitivity of the LAMP assay for pork DNA detection is 0.5 pg in our experiment, and the results were not affected by processing temperature. We used the LAMP assay and the industry standard for Chinese entry-exit inspections and quarantines to analyze commercial halal products, and the results were comparable. In conclusion, the LAMP assay has excellent sensitivity and specificity and is a convenient method for pork DNA detection.     

环介导恒温核酸扩增法的研究和技术方法

核酸扩增是生命科学领域最具价值的工具之一,在临床微生物检测、传染性疾病以及基因诊断方面具有独特的应用价值。传统的检测方法均存在一定的局限性,因此基于核酸扩增的检测方法具有广阔的应用前景。环介导恒温核酸扩增法（loop-mediatedisothermalamplificationofDNA,简称LAMP）是一种新型的核酸扩增方法,由于其特异性和灵敏度高、简便快捷且成本低廉,因此在可预见的将来,LAMP技术将在核酸扩增领域逐渐取代PCR反应,推动检测技术向更快捷简便,更精确廉价的方向发展。     

可视化环介导恒温扩增法检测蔬菜产地环境灌溉水源中沙门氏菌

目的建立可视化环介导恒温扩增体系(loop-mediated isothermal amplification, LAMP)检测灌溉水源中沙门氏菌的分析方法。方法以沙门氏菌侵袭蛋白A(invA)基因序列设计特异性LAMP检测引物,优化LAMP反应体系和反应条件后,通过特异性实验、灵敏度实验对LAMP检测方法进行测试,并与国标检测方法对比检测人工污染的灌溉水源样品,验证该方法的准确性。结果灵敏度实验结果显示本LAMP检测方法最低检出限为7 CFU/25μL,特异性实验结果显示本LAMP检测方法具有良好的特异性,干扰菌株对本LAMP检测方法无影响。该方法在与国家标准检测方法对比,检测人工污染的灌溉水源样品时具有相同的准确性,检测灵敏度为1×10^2 CFU/mL。结论本研究建立了快速、准确、灵敏的恒温扩增体系,可以应用于灌溉水源中沙门氏菌的快速检测。     

LAMP在阪崎克罗诺杆菌检测中的研究进展

阪崎克罗诺杆菌(Cronobacter sakazakii)是一类食源性致病菌,可引起新生儿脑膜炎、败血症等疾病.环介导等温扩增(Loop-Mediated Isothermal Amplification,LAMP)技术是一类新型的恒温核酸扩增技术,具有灵敏度高、耗时短、特异性强、对设备需求低等特点,可与多种检测方法...     

可视化LAMP检测常见肉制品中猪肉成分

根据GenBank中公布的猪线粒体色素细胞b基因序列设计6 条特异性环介导等温扩增（loop-mediated isothermal amplification,LAMP）引物,通过简化线粒体DNA提取步骤,优化反应体系,以常见的牛、羊、鸡、鸭、马、驴肉为阴性对照验证该方法的特异性,掺假率梯度稀释以验证该LAMP法的最低检测限,建立常见肉制品中猪肉成分的可视化LAMP检测方法。结果表明：该方法提取目的基因操作简单、稳定,该可视化LAMP检测法以4-(2-吡啶偶氮)-间苯二酚钠盐为指示剂,能准确检测出常见肉类中猪肉是否掺杂,检测结果肉眼可见,灵敏度为10 pg/μL。     

应用LAMP实时浊度法检测转基因大豆

DNA环介导等温扩增(Loop Mediated Isothermal Amplification,LAMP)方法是一种新型的核酸扩增检测方法,该方法操作简便、所需时间短、灵敏度高、特异性强.实时浊度法可以实时检测反应过程中所产生的白色沉淀,从而实现对LAMP整个反应过程的实时监控.本研究以抗草甘膦转基因大豆为研究对象...     

环介导等温扩增检测技术的应用与方法改进

环介导等温扩增(loop-mediated isothermal amplification,LAMP)是近些年发展起来的一种新型核酸扩增技术,其原理是利用在线软件设计4条特异性引物,在具有强链置换活性的DNA聚合酶作用下,使模板两端引物的结合处循环出现环状单链结构,以实现恒温条件下的连续快速扩增,该方法具有特异性强、灵敏度高、耗时短且无需昂贵的热循环设备等优点。目前该技术在国内外已经广泛应用于细菌、病毒及寄生虫等病原体的检测以及鉴定胚胎性别。本文从LAMP技术的原理、方法改造、检测应用以及与其他检测方法的比较这4方面进行综述,为今后LAMP技术的应用提供理论依据并对未来的发展进行了展望。     

环介导等温扩增技术在病原微生物快速检测中的研究进展

病原微生物是危害人类健康的最主要影响因素之一, 快速、准确地鉴定病原微生物对保障人类健康具有重要意义。环介导等温扩增技术(loop-meditated isothermal amplification, LAMP)是一种新型的等温核酸扩增技术, 具有特异性高、灵敏度高、快速、经济、简便的优点。可以与其他新技术结合, 弥补其引物设计困难和易被污染的不足, 使其能够在更多领域应用, 尤其是在资源贫乏地区的基因检测以及食品的快速检测和基层检测。本文就环介导等温扩增的基本原理、特点及在病原微生物检测中的应用对近些年的研究进展进行综述, 并对环介导等温扩增未来发展方向进行展望, 为环介导等温扩增技术的进一步发展提供参考。     

食品过敏原检测技术研究进展

目前食物过敏在人群中的収生率呈明显上升趋势,食物过敏已成为突出的食品安全问题。食物过敏事敀最有敁的预防方式是过敏者避克食用过敏食物,因此检测不同食物中是否含有过敏原其有十分重要的意义。本文比较了食品法具委员会、澳大利亚、加拿大、中国、欧盟、日本、南非、美国对食品过敏原标识管理的情况,综述了基于蛋白水平的酶联克疫(enzyme-linked immuno sorbent assay, ELISA)法、克疫层析技术和基于核酸水平的实时荧光定量PCR技术、环介导等温扩增技术(loop-mediated isothermal amplification, LAMP)检测食物过敏原的方法,探讨了质谱法以及生物芯片、生物传感器等兵他新关检测技术在过敏原检测领域的应用,有利于加强食品质量监管的力度,确保食品安全。     

Rapid point-of-care testing methods/devices for meat species identification: A review

The authentication of animal species is an important issue due to an increasing trend of adulteration and mislabeling of animal species in processed meat products. Polymerase chain reaction is the most sensitive and specific technique for nucleic acid-based animal species detection. However, it is a time-consuming technique that requires costly thermocyclers and sophisticated labs. In recent times, there is a need of on-site detection by point-of-care (POC) testing methods and devices under low-resource settings. These POC devices must be affordable, sensitive, specific, user-friendly, rapid and robust, equipment free, and delivered to the end users. POC devices should also confirm the concept of micro total analysis system. This review discusses POC testing methods and devices that have been developed for meat species identification. Recent developments in lateral flow assay-based devices for the identification of animal species in meat products are also reviewed. Advancements in increasing the efficiency of lateral flow detection are also discussed.     

Sensitive and rapid detection of Alicyclobacillus acidoterrestris using loop-mediated isothermal amplification

BACKGROUND: A loop‐mediated isothermal amplification (LAMP) assay was developed for the rapid detection (within 2 h) of Alicyclobacillus acidoterrestris. The assay detected the species‐specific DNA sequence of the 16S–23S rRNA internal transcribed spacer. RESULTS: The eight strains of A. acidoterrestris were successfully amplified, but six strains of other bacillus Acidocaldarius and 13 bacterial species other than bacillus Acidocaldarius were not. The sensitivity of the LAMP assay was at 4.50 × 10^?2 cfu per tube. This sensitivity is greater than that obtained by polymerase chain reaction (PCR) assay. The LAMP assay was examined further for its ability to detect A. acidoterrestris in juice samples. The results were compared with those of conventional PCR detection. CONCLUSION: Results indicate that the proposed LAMP assay is a rapid, specific and sensitive method for detecting A. acidoterrestris. As the amplification has been conducted under isothermal conditions, only a water bath or heating block is needed to maintain the required temperature. Thus, the method can be generalised and popularised easily in the future. Copyright © 2011 Society of Chemical Industry     

环介导等温扩增技术检测不同乳制品常见食源性致病菌

目的验证环介导等温扩增技术(loop-mediated isothermal amplification, LAMP)试剂和仪器在不同乳制品常见食源性致病菌检测中的应用效果。方法针对不同乳制品中常见食源性致病菌,运用LAMP建立便捷、快速、高效地检测方法,并以实验室储备菌株及人工污染乳制品样品评价LAMP检测引物试剂和仪器在快速筛查中的适用性。结果选用的引物试剂仅对目标菌株核酸产生扩增,其余菌株无扩增,扩增检测灵敏度均达101fg/μL。用国家标准法和LAMP方法同时检测婴幼儿奶粉、奶酪样品,检测结果完全一致,对发酵奶样品进行检测时大肠杆菌O157:H7和金黄色葡萄球菌也呈现出良好的检测结果。检测总耗时不超过30 min。结论采用的GenieⅡ实时荧光检测仪操作简单,便携轻便,可实时监测不同乳制品中的大肠杆菌O157:H7、金黄色葡萄球菌及沙门氏菌污染,特异性强、敏感度高,适合企业批量现场快速检测。