Acute Toxicity-Supported Chronic Toxicity Prediction: A k-Nearest Neighbor Coupled Read-Across Strategy

A k-nearest neighbor (k-NN) classification model was constructed for 118 RDT NEDO (Repeated Dose Toxicity New Energy and industrial technology Development Organization; currently known as the Hazard Evaluation Support System (HESS)) database chemicals, employing two acute toxicity (LD₅₀)-based classes as a response and using a series of eight PaDEL software-derived fingerprints as predictor variables. A model developed using Estate type fingerprints correctly predicted the LD₅₀ classes for 70 of 94 training set chemicals and 19 of 24 test set chemicals. An individual category was formed for each of the chemicals by extracting its corresponding k-analogs that were identified by k-NN classification. These categories were used to perform the read-across study for prediction of the chronic toxicity, i.e., Lowest Observed Effect Levels (LOEL). We have successfully predicted the LOELs of 54 of 70 training set chemicals (77%) and 14 of 19 test set chemicals (74%) to within an order of magnitude from their experimental LOEL values. Given the success thus far, we conclude that if the k-NN model predicts LD₅₀ classes correctly for a certain chemical, then the k-analogs of such a chemical can be successfully used for data gap filling for the LOEL. This model should support the in silico prediction of repeated dose toxicity.     

K?ln-Timi?oara Molecular Activity Combined Models toward Interspecies Toxicity Assessment

Aiming to provide a unified picture of computed activity – quantitative structure activity relationships, the so called Köln (ESIP-ElementSpecificInfluenceParameter) model for activity and Timisoara (Spectral-SAR) formulation of QSAR were pooled in order to assess the toxicity modeling and inter-toxicity correlation maps for aquatic organisms against paradigmatic organic compounds. The Köln ESIP model for estimation of a compound toxicity is based on the experimental measurement expressing the direct action of chemicals on the organism Hydractinia echinata so that the structural influence parameters are reflected by the metamorphosis degree itself. As such, the calculation of the structural parameters is absolutely necessary for correct evaluation and interpretation of the evolution of M(easured) and the C(computed) values. On the other hand, the Timişoara Spectral-SAR analysis offers correlation models and paths for H.e. species as well as for four other different organisms with which the toxicity may be inter-changed by means of the same mechanism of action induced by certain common chemicals.     

Hydrodynamic and mass transfer characterization of a flat-panel airlift photobioreactor with high light path

This work evaluates the volumetric mass transfer coefficient (k_La), the gas hold-up (?) and the mixing time (t_m) as a function of superficial gas velocity (U_G) in a flat-panel photobioreactor (PBR) with high light path. CO₂ utilization efficiency and volumetric power consumption (P/V) were also evaluated. A 50 L working volume photobioreactor was developed, 0.67 m in length, 0.57 m in height and 0.15 m in width (light path). The height-width ratio was 3.8, which is lower than reported in most PBRs. Initially, experiments were performed with air and tap water (biphasic system) and, subsequently, using a Spirulina sp. culture (triphasic system: air, culture medium, cells). Minimum and maximum superficial gas velocity values were 5 × 10⁻⁵ and 8.4 × 10⁻³ m s⁻¹, respectively. Maximum values for k_La and ? were 20.34 h⁻¹ (0.0057 s⁻¹) and 0.033 in the biphasic system, and 31.27 h⁻¹ (0.0087 s⁻¹) and 0.065 in the triphasic system. CO₂ utilization efficiency was 30.57%. Results indicate that the hydrodynamic and mass transfer characteristics of this photobioreactor are more efficient than those reported elsewhere for tubular and other flat-plate PBRs, which opens the possibility of using PBRs with higher light paths than yet proposed.     

化学品鱼类急性毒性QSAR模型研究

为了管理化学物质的使用,需要用已知化合物的毒性来预测未知化合物的毒性。采用定量构效关系(QSAR)方法预测一系列环境化合物鱼类急性毒性(50%Lethal Concentration,LC50)。综述了QSAR的研究进展、方法体系、建模的数学方法、分子描述符,最后用辛醇/水分配系数法总结了119类化合物对鱼类急性毒性QSAR模型,对预测环境化合物鱼类毒害(LC50)提供重要价值。     

Quantitative Structure-Activity Relationships Study on the Rate Constants of Polychlorinated Dibenzo-p-Dioxins with OH Radical

The OH-initiated reaction rate constants (k_OH) are of great importance to measure atmospheric behaviors of polychlorinated dibenzo-p-dioxins (PCDDs) in the environment. The rate constants of 75 PCDDs with the OH radical at 298.15 K have been calculated using high level molecular orbital theory, and the rate constants (k_α, k_β, k_γ and k_OH) were further analyzed by the quantitative structure-activity relationships (QSAR) study. According to the QSAR models, the relations between rate constants and the numbers and positions of Cl atoms, the energy of the highest occupied molecular orbital (E_HOMO), the energy of the lowest unoccupied molecular orbital (E_LUMO), the difference ΔE_HOMO-LUMO between E_HOMO and E_LUMO, and the dipole of oxidizing agents (D) were discussed. It was found that E_HOMO is the main factor in the k_OH. The number of Cl atoms is more effective than the number of relative position of these Cl atoms in the k_OH. The k_OH decreases with the increase of the substitute number of Cl atoms.     

Application of the thermal DeNOx process to diesel engine DeNOx: an experimental and kinetic modelling study

Diesel DeNO_x experiments have been conducted using the selective noncatalytic ‘thermal DeNO_x’ process in a diesel fuelled combustion-driven flow reactor which simulated a single cylinder (966 cm³) and head equipped with a water-cooling jacket and an exhaust pipe. NH₃ was directly injected into the cylinder to reduce NO_x emissions. A wide range of air/fuel ratios (A/F=20-40) was selected for NO_x reduction where an initial NO_x of 530 ppm was usually maintained with a molar ratio (β=NH₃/NO_x) of 1.5.The results indicate that a 34% NO_x reduction can be achieved from the cylinder injection in the temperature range, 1100-1350 K. Most of the NO_x reduction occurs within the cylinder and head section (residence time<40 ms), since temperatures in the exhaust are too low for additional NO_x reduction. Under large gas quenching rates, increasing β values (e.g. 4.0) substantially increase the NO_x reduction up to 60%, which is comparable with those achieved under isothermal conditions. Experimental findings are analysed by chemical kinetics using the Miller and Bowman mechanism including both N/H/O species and CO/hydrocarbon reactions to account for CO/UHC oxidation effects, based on practical nonisothermal conditions. Comparisons of the kinetic calculations with the experimental data are given as regards temperature characteristics, residence time and molar ratio. In addition, the effects of CO/UHC and branching ratio (α=k₁/(k₁+k₂)) for the reaction NH₂+NO=products are discussed in terms of NO reduction features, together with practical implications.     

Synthesis of thermosetting poly(phenylene ether) containing allyl groups

New thermosetting poly(2-allyl-6-methylphenol-co-2,6-dimethylphenol)s (3) have been developed by oxidative coupling copolymerization of 2-allyl-6-methylphenol (1) with 2,6-dimethylphenol (2), followed by thermal curing. Copolymerization was conducted in nitrobenzene in the presence of copper(I) chloride and pyridine as the catalyst under a stream of oxygen, producing high molecular weight copolymers (M_n∼50,000) with broad molecular weight distributions (M_w/M_n∼35). The structure of resulting copolymers 3 was characterized by IR, ¹H, and ¹³C NMR spectroscopy. Cross-linking reactions of copolymers were carried out by thermal treatment in the absence or presence of a peroxide (3 wt%, 2,5-dimethyl-2,5-di(tert-butylperoxy)-3-butane). The 10% weight loss and glass transition temperatures of the cured copolymers were 436 °C in nitrogen and 235 °C, respectively after curing at 70 °C for 1 h and 300 °C for 1 h. The average refractive index of the cured copolymer (3b) film was 1.5407, from which the dielectric constant (ε) at 1 MHz was estimated as 2.6. The ε and dissipation factor of copolymer-films at 1 MHz were directly measured from their capacitances as 2.5-2.6 and 0.0015-0.0019, respectively.     

The interfaces of lanthanum oxide-based subnanometer EOT gate dielectrics

When pushing the gate dielectric thickness of metal-oxide-semiconductor (MOS) devices down to the subnanometer scale, the most challenging issue is the interface. The interfacial transition layers between the high-k dielectric/Si and between the high-k dielectric/gate metal become the critical constraints for the smallest achievable film thickness. This work presents a detailed study on the interface bonding structures of the tungsten/lanthanum oxide/silicon (W/La₂O₃/Si) MOS structure. We found that both W/La₂O₃ and La₂O₃/Si are thermally unstable. Thermal annealing can lead to W oxidation and the forming of a complex oxide layer at the W/La₂O₃ interface. For the La₂O₃/Si interface, thermal annealing leads to a thick low-k silicate layer. These interface layers do not only cause significant device performance degradation, but also impose a limit on the thinnest equivalent oxide thickness (EOT) to be achievable which may be well above the requirements of our future technology nodes.     

La1−xSrxFeO3−δ perovskites as redox materials for application in a membrane reactor for simultaneous production of pure hydrogen and synthesis gas

This work reports on the preparation and characterization of perovskitic materials with the general formula La_1−xSr_xFeO₃ (x = 0, 0.3, 0.7, 1) for application in a dense mixed conducting membrane reactor process for simultaneous production of synthesis gas and pure hydrogen. Thermogravimetric experiments indicated that the materials are able to loose and uptake reversibly oxygen from their lattice up to 0.2 oxygen atoms per “mole” for SrFeO₃ with x = 1 at 1000 °C. The capability of the prepared powders to convert CH₄ during the reduction step, in order to produce synthesis gas, as well as their capability to dissociate water during the oxidation step, in order to produce hydrogen were evaluated by pulse reaction experiments in a fixed bed pulse reactor. The high sintering temperatures (1100-1300 °C) required for the densification of the membrane materials result in decreased methane conversion and H₂ yields during the reduction step compared to the corresponding values obtained with the perovskite powders calcined at 1000 °C. Addition of small quantities of NiO, by simple mechanical mixing, to the perovskites after their sintering at high temperatures, increases substantially both their methane decomposition reactivity, their selectivity towards CO and H₂ and their water splitting activity. Maximum H₂ yield during the reduction step is achieved with the La_0.7Sr_0.3FeO₃ sample mixed with 5% NiO and is 80% of the theoretically expected H₂, based on complete methane decomposition. In the oxidation - water splitting step, 912 μmol H₂ per gr solid are produced with the La_0.3Sr_0.7FeO₃ sample mixed with 5% NiO. The experimental results of this work can be equally well applied for the “chemical-looping reforming” process since they concern using the lattice oxygen of the perovskite oxides for methane partial oxidation to syngas, in the absence of molecular oxygen, and subsequent oxidation of the solid.     

Optical and structural properties of amorphous SexTe100-x aligned nanorods

In the present work, we report studies on optical and structural phenomenon in as-deposited thin films composed of aligned nanorods of amorphous Se_xTe_100-x (x = 3, 6, 9, and 12). In structural studies, field emission scanning electron microscopic (FESEM) images suggest that these thin films contain high yield of aligned nanorods. These nanorods show a completely amorphous nature, which is verified by X-ray diffraction patterns of these thin films. Optical studies include the measurement of spectral dependence of absorption, reflection, and transmission of these thin films, respectively. On the basis of optical absorption data, a direct optical band gap is observed. This observation of a direct optical band gap in these nanorods is interesting as chalcogenides normally show an indirect band gap, and due to this reason, these materials could not become very popular for semiconducting devices. Therefore, this is an important report and will open up new directions for the application of these materials in semiconducting devices. The value of this optical band gap is found to decrease with the increase in selenium (Se) concentration. The reflection and absorption data are employed to estimate the values of optical constants (extinction coefficient (k) and refractive index (n)). From the spectral dependence of these optical constants, it is found that the values of refractive index (n) increase, whereas the values of extinction coefficient (k) decrease with the increase in photon energy. The real and imaginary parts of dielectric constants calculated with the values of extinction coefficient (k) and refractive index (n), are found to vary with photon energy and dopant concentration.     

Effect of HfO2 content on the microstructure and piezoelectric properties of (Bi0.5Na0.5)0.94Ba0.06TiO3 lead-free ceramics

(Bi_0.5Na_0.5)_0.94Ba_0.06TiO₃–xHfO₂ [BNBT–xHfO₂] lead-free ceramics were prepared using the conventional solid-state reaction method. Effects of HfO₂ content on their microstructures and electrical properties were systematically studied. A pure perovskite phase was observed in all the ceramics with x=0–0.07 wt%. Adding optimum HfO₂ content can induce dense microstructures and improve their piezoelectric properties, and a high depolarization temperature was also obtained. The ceramics with x=0.03 wt% possess optimum electrical properties (i.e., d₃₃~168 pC/N, k_p~32.1%, Q_m~130, ε_r~715, tan δ~0.026, and T_d~106 °C, showing that HfO₂-modified BNBT ceramics are promising materials for piezoelectric applications.     

Transgene IL-6 Enhances DC-Stimulated CTL Responses by Counteracting CD4+25+Foxp3+ Regulatory T Cell Suppression via IL-6-Induced Foxp3 Downregulation

Dendritic cells (DCs), the most potent antigen-presenting cells have been extensively applied in clinical trials for evaluation of antitumor immunity. However, the efficacy of DC-mediated cancer vaccines is still limited as they are unable to sufficiently break the immune tolerance. In this study, we constructed a recombinant adenoviral vector (AdV_IL-6) expressing IL-6, and generated IL-6 transgene-engineered DC vaccine (DC_OVA/IL-6) by transfection of murine bone marrow-derived ovalbumin (OVA)-pulsed DCs (DC_OVA) with AdV_IL-6. We then assessed DC_OVA/IL-6-stimulated cytotoxic T-lymphocyte (CTL) responses and antitumor immunity in OVA-specific animal tumor model. We demonstrate that DC_OVA/IL-6 vaccine up-regulates expression of DC maturation markers, secretes transgene-encoded IL-6, and more efficiently stimulates OVA-specific CTL responses and therapeutic immunity against OVA-expressing B16 melanoma BL6-10_OVA in vivo than the control DC_OVA/Null vaccine. Moreover, DC_OVA/IL-6-stimulated CTL responses were relatively maintained in mice with transfer of CD4⁺25⁺Foxp3⁺ Tr-cells, but significantly reduced when treated with anti-IL-6 antibody. In addition, we demonstrate that IL-6 down-regulates Foxp3-expression of CD4⁺25⁺Foxp3⁺ Tr-cells in vitro. Taken together, our results demonstrate that AdV-mediated IL-6 transgene-engineered DC vaccine stimulates potent CTL responses and antitumor immunity by counteracting CD4⁺25⁺ Tr immunosuppression via IL-6-induced Foxp3 down-regulation. Thus, IL-6 may be a good candidate for engineering DCs for cancer immunotherapy.     

CFD analysis of interphase mass transfer and energy dissipation in a milliliter-scale stirred-tank reactor for filamentous microorganisms

A newly developed stirred tank bioreactor for the cultivation of filamentous microorganisms on a milliliter-scale was investigated by means of computational fluid dynamics (CFD). The applied paddle impeller has an asymmetric shape and thus creates a complex liquid vortex in an unbaffled reactor. Size and shape of the formed gas–liquid interface were simulated applying CFD because they cannot be measured experimentally. As expected, higher stirrer speeds correspond to deeper vortices and larger interfacial areas. CFD simulations confirmed stirrer functionality at high liquid viscosities. Volumetric oxygen mass transfer coefficients (k_La) were estimated based on the simulated interfaces. Comparison with experimental data showed good agreement. Simulated maximum energy dissipations were in the same order of magnitude as experimental data at varying stirrer speeds. In contrast to these findings, simulated power characteristics showed significant deviations if compared to measured data. One reason may be the challenging turbulence modeling of two-phase flows with strong streamline curvature and the mostly transitional flow regime. Another reason could be the demanding measurement of very small stirrer torques.     

Anti-TMV Activity of Malformin A1, a Cyclic Penta-Peptide Produced by an Endophytic Fungus Aspergillus tubingensis FJBJ11

Plant-associated microorganisms are known to produce a variety of metabolites with novel structures and interesting biological activities. An endophytic fungus FJBJ11, isolated from the plant tissue of Brucea javanica (L.) Merr. (Simaroubaceae), was proven to be significantly effective in producing metabolites with anti-Tobacco mosaic virus (TMV) activities. The isolate was identified as Aspergillus tubingensis FJBJ11 based on morphological characteristics and ITS sequence. Bioassay-guided isolation led to the identification of a cycli penta-peptide, malformin A₁, along with two cyclic dipeptides, cyclo (Gly-l-Pro) and cyclo (Ala-Leu). Malformin A₁ showed potent inhibitory effect against the infection and replication of TMV with IC₅₀ values of 19.7 and 45.4 μg·mL⁻¹, as tested using local lesion assay and leaf-disc method, respectively. The results indicated the potential use of malformin A₁ as a leading compound or a promising candidate of new viricide.