Declining chilling and its impact on temperate perennial crops

This paper examines the impacts of declining winter chill on the production of temperate perennial crops in the northern hemisphere. Recent studies have linked long-term climate data to key seasonal reproductive events in perennial plants. These studies suggest that the amount of winter chill occurring in the UK has declined and is predicted to continue to do so, based on future climate change scenarios described in the UK Climate Impacts Programme. It is apparent that there is a serious lack of mechanistic understanding of the physiological, molecular and genetical basis of winter chill requirement and dormancy-related environmental factors which affect perennial crop growth and yield. This situation exists despite knowledge of the impacts of climate on perennial plant development and an ability to model its effects, for many temperate fruit crops, on yield. The implications for future reductions in winter chill require recognition as a potential limiting factor on fruit production across Europe, particularly in the south. Within this review we describe the symptoms of lack of winter chill; these include effects on bud break, flower quality and the potential to set fruit, as well as effects on vegetative growth and development. Also included is current knowledge of developmental and physiological events which link flower initiation, anthesis, dormancy, chilling and bud break. Attention is given to what is known about dormancy induction, satisfaction of specific requirements and bud break. Possible strategies are described for mitigation of reduced winter chill, providing long-term solutions to secure perennial fruit supplies in Europe. This includes exploiting genotypic variability, within several perennial crops, through plant breeding to develop low chill-cultivars, together with opportunities to change crop management practices and growing systems to tolerate low chill.     

Bud Dormancy in the Kiwi Fruit, Actinidia chinensis Planch

A study of lateral bud dormancy in Actinidia chinensis has shownthat true dormancy can be induced, especially in short daysat warm and constant temperatures This dormancy can be brokenquantitatively by chilling but temperatures as high as 10 °Care effective The dormancy appears to be due to an inhibitor(possibly ABA), apparently stored in the special bud cover aspecial structure in Kiwi fruit which may represent fused stipulesRemoval of the cover also admits oxygen and light, both of whichhave promoting effects on bud break Application of ABA enhancesdormancy (as do crude extracts tentatively identified as ABA)while GA₃ application enhances dormancy before chilling andpromotes bud break only after chilling Actinidia chinensis, Kiwi fruit, dormancy, abscissic acid, gibberellic acid, chilling     

Chilling and heat requirements for leaf unfolding in European beech and sessile oak populations at the southern limit of their distribution range

With global warming, an advance in spring leaf phenology has been reported worldwide. However, it is difficult to forecast phenology for a given species, due to a lack of knowledge about chilling requirements. We quantified chilling and heat requirements for leaf unfolding in two European tree species and investigated their relative contributions to phenological variations between and within populations. We used an extensive database containing information about the leaf phenology of 14 oak and 10 beech populations monitored over elevation gradients since 2005. In parallel, we studied the various bud dormancy phases, in controlled conditions, by regularly sampling low- and high-elevation populations during fall and winter. Oak was 2.3 times more sensitive to temperature for leaf unfolding over the elevation gradient and had a lower chilling requirement for dormancy release than beech. We found that chilling is currently insufficient for the full release of dormancy, for both species, at the lowest elevations in the area studied. Genetic variation in leaf unfolding timing between and within oak populations was probably due to differences in heat requirement rather than differences in chilling requirement. Our results demonstrate the importance of chilling for leaf unfolding in forest trees and indicate that the advance in leaf unfolding phenology with increasing temperature will probably be less pronounced than forecasted. This highlights the urgent need to determine experimentally the interactions between chilling and heat requirements in forest tree species, to improve our understanding and modeling of changes in phenological timing under global warming.     

Cytosine methylation at CG and CNG sites is differential during the development of triploid black poplar

It has been widely shown that polyploidization can result in changes in cytosine methylation. However, little is known regarding how cytosine methylation changes in polyploids development, especially in polyploid trees. In this study, we investigated drifting changes of DNA methylation status at 5′-CCGG sites in the apical bud, young and mature leaf tissues of triploid black poplar (Populus. euramericana) with methylation-sensitive amplification polymorphism (MSAP) and assessed the expression of multiple DNA methyltransferases (MTases) and DNA demethylase during different developmental stages. MSAP analysis detected methylation levels at CG and CNG sites of diploid tissues reduced during development from bud to leaves, while for the triploid, methylation at CNG sites increased during development, but levels of methylation at CG sites first decreased in young leaves before increasing in mature leaves. MTase genes related to CG or CNG methylation were respectively preferential in different triploid tissues with high CG or CNG methylation levels. High expression of DNA demethylase was observed in tissue with high demethylation trends. These finding suggest CG and CNG methylation and their related enzymes are involved with different biological functions and networks of gene regulation in different developmental stages of triploid.     

Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds

Bud break in raspberry (Rubus idaeus L.) is often poor and uneven, with many of the subapical buds remaining in a dormant state. In order to determine the dormancy status of raspberry buds, an empirical measure of bud burst in a growth-permissive environment following exposure to chilling (4 degrees C cold storage) was developed. For cv. Glen Ample, percentage bud burst in intact canes and isolated nodes was recorded after 14 d. Isolated nodes (a measure of endodormancy) achieved 100% bud burst after approximately 1500 h chilling whereas buds on intact plants (combined endo- and paradormancy) required an additional 1000 h chilling. A microarray approach was used to follow changes in gene expression that occurred during dormancy transition. The probes for the microarrays were obtained from endodormant and paradormant raspberry bud cDNA libraries. The expression profiles of 5300 clones from these libraries were subjected to principal component analysis to determine the most significant expression patterns. Sequence analysis of these clones, in many cases, enabled their functional categorization and the development of hypotheses concerning the mechanisms of bud dormancy release. Thus a set of novel candidates for key dormancy-related genes from raspberry buds have been identified. Bud dormancy is fundamental to the study of plant developmental processes and, in addition, its regulation is of significant economic importance to fruit and horticultural industries.     

Chill-responsive dehydrins in blueberry: Are they associated with cold hardiness or dormancy transitions?

To survive winters, woody perennials of temperate zones must enter into endodormancy. Resumption of spring growth requires sufficient exposure to low temperature (chill units, CUs) in winter (chilling requirement), which also plays a role in the development of cold hardiness (cold acclimation). Physiological studies on dormancy breaking have focused on identifying markers, such as appearance or disappearance of proteins in response to varying degrees of chill unit accumulation. However, whether these changes are associated with dormancy transitions or cold acclimation is not clear. In the present study, greenhouse-grown blueberry (Vaccinium section Cyanococcus) plants were used to address this question. Three blueberry cultivars, Bluecrop, Tifblue, and Gulfcoast having chilling requirement of approximately 1 200, 900 and 600 CUs, respectively, were first exposed to 4°C for long enough to provide chill units equivalent to one-half of their respective chilling requirement. This treatment was expected to result in cold acclimation. A fraction of plants was then subjected to a 15/12°C (light/dark) regime for 2 weeks, a treatment expected to be “dormancy-neutral” but cause deacclimation. Before and after each treatment, cold hardiness and dormancy status of floral buds were determined; proteins were extracted from the buds collected on the same sampling date, and separated by one-dimensional SDS-PAGE. Dehydrin-like proteins were identified by immunoblotting, using anti-dehydrin antiserum. Results indicate that the chilling treatment resulted in cold acclimation as indicated by increased bud hardiness in all three cultivars. Data also indicate a distinct accumulation of three dehydrin-like proteins of 65, 60, and 14 kDa during cold acclimation. The cold hardiness and levels of dehydrin proteins decreased during the exposure to 15/12°C for 2 weeks. Results also confirmed that this treatment had no negative effect on chill unit accumulation. Densitometric scans of protein gels indicated a close association between the abundance of dehydrins and degree of cold hardiness in these cultivars. In addition, levels of the dehydrin proteins and cold hardiness remained about the same between 100% and >100% satisfaction of chilling requirement. These results suggest that changes in dehydrin expression are more closely associated with cold hardiness than with dormancy transitions.     

Functional diversification of the dehydrin gene family in apple and its contribution to cold acclimation during dormancy

Dehydrins (DHN) are proteins involved in plant adaptive responses to abiotic stresses, mainly dehydration. Several studies in perennial crops have linked bud dormancy progression, a process characterized by the inability to initiate growth from meristems under favorable conditions, with DHN gene expression. However, an in‐depth characterization of DHNs during bud dormancy progression is still missing. An extensive in silico characterization of the apple DHN gene family was performed. Additionally, we used five different experiments that generated samples with different dormancy status, including genotypes with contrasting dormancy traits, to analyze how DHN genes are being regulated during bud dormancy progression in apple by real‐time quantitative polymerase chain reaction (RT‐qPCR). Duplication events took place in the diversification of apple DHN family. Additionally, MdDHN genes presented tissue‐ and bud dormant‐specific expression patterns. Our results indicate that MdDHN genes are highly divergent in function, with overlapping levels, and that their expressions are fine‐tuned by the environment during the dormancy process in apple.     

Changes in Dormancy and Sensitivity to Vernalization in Axillary Buds of Satsuma Mandarin Examined in vitro During the Annual Cycle

Effect of season and the presence of fruit on bud-endodormancyand the flowering response to low temperature treatments weredetermined using bud cultures of Owari satsuma mandarin (Citrusunshiu Marc). Bud dormancy was deeper in fruiting as comparedto defruited trees. In fruiting trees, the intensity of buddormancy was highest in spring, decreased to a low value byearly Jul. and then increased until early winter. This increasein dormancy during summer and early autumn did not occur innon-fruiting trees. No flowers formed in buds cultured betweenMay and Sep. Both in fruiting and defruited trees, buds becamecompetent to show a vernalization response to chilling by theend of Oct., at the time they also became capable of sproutingin vitro at low temperature (15/10 °C). There was a directeffect of fruit on the buds which persisted long after fruitremoval and resulted in a reduction of the flowering responseto chilling.Copyright 1995, 1999 Academic Press Citrus flowering, Citrus unshiu Marc., dormancy, flower induction, flowering, in vitro flowering, satsuma mandarin, vernalization     

Effects of Oxygen and Respiratory Inhibitors on Induction and Release of Dormancy in Aerial Tubers of Begonia evansiana

Effects of O₂ and some respiratory inhibitors on the induction and release of bud dormancy were examined with the aerial tubers of different ages of Begonia evansiana Andr. Oxygen was needed not only for tuber sprouting but also during the chilling process at 2 to 5 C to break tuber dormancy. If the mature tubers were exposed to blue light during the chilling period, their dormancy was strikingly released even by the chilling given under an O₂ concentration as low as 3%. Blue light pretreatment promoted photo-sprouting of immature tubers only when given under lower O₂ concentrations. On the other hand, red light became effective in inducing dormancy in the immature tubers and in prolonging dormancy in the mature tubers as O₂ tension was increased. This was also the case with the induction of dormancy in the immature tubers by exposing them to a lower temperature (17 C) in the dark. The development of dormancy was suppressed by 2,4-dinitrophenol, p-nitrophenol, and sodium azide.     

Dnmt2 is the most evolutionary conserved and enigmatic cytosine DNA methyltransferase in eukaryotes

Dnmt2 is the most strongly conserved cytosine DNA methyltransferase in eukaryotes. It has been found in all organisms possessing methyltransferases of the Dnmt1 and Dnmt3 families, whereas in many others Dnmt2 is the sole cytosine DNA methyltransferase. The Dnmt2 molecule contains all conserved motifs of cytosine DNA methyltransferases. It forms 3D complexes with DNA very similar to those of bacterial DNA methyltransferases and performs cytosine methylation by a catalytic mechanism common to all cytosine DNA methyltransferases. Catalytic activity of the purified Dnmt2 with DNA substrates is very low and could hardly be detected in direct biochemical assays. Dnmt2 is the sole cytosine DNA methyltransferase in Drosophila and other dipteran insects. Its overexpression as a transgene leads to DNA hypermethylation in all sequence contexts and to an extended life span. On the contrary, a null-mutation of the Dnmt2 gene leads to a diminished life span, though no evident anomalies in development are observed. Dnmt2 is also the sole cytosine DNA methyltransferase in several protists. Similar to Drosophila these protists have a very low level of DNA methylation. Some limited genome compartments, such as transposable sequences, are probably the methylation targets in these organisms. Dnmt2 does not participate in genome methylation in mammals, but seems to be an RNA methyltransferase modifying the 38th cytosine residue in anticodon loop of certain tRNAs. This modification enhances stability of tRNAs, especially in stressful conditions. Dnmt2 is the only enzyme known to perform RNA methylation by a catalytic mechanism characteristic of DNA methyltransferases. The Dnmt2 activity has been shown in mice to be necessary for paramutation establishment, though the precise mechanisms of its participation in this form of epigenetic heredity are unknown. It seems likely, that either of the two Dnmt2 activities could become a predominant one during the evolution of different species. The high level of the Dnmt2 evolutionary conservation proves its activity to have a significant adaptive value in natural environment.     

Chilling and heat requirements for flowering in temperate fruit trees

Climate change has affected the rates of chilling and heat accumulation, which are vital for flowering and production, in temperate fruit trees, but few studies have been conducted in the cold-winter climates of East Asia. To evaluate tree responses to variation in chill and heat accumulation rates, partial least squares regression was used to correlate first flowering dates of chestnut (Castanea mollissima Blume) and jujube (Zizyphus jujube Mill.) in Beijing, China, with daily chill and heat accumulation between 1963 and 2008. The Dynamic Model and the Growing Degree Hour Model were used to convert daily records of minimum and maximum temperature into horticulturally meaningful metrics. Regression analyses identified the chilling and forcing periods for chestnut and jujube. The forcing periods started when half the chilling requirements were fulfilled. Over the past 50 years, heat accumulation during tree dormancy increased significantly, while chill accumulation remained relatively stable for both species. Heat accumulation was the main driver of bloom timing, with effects of variation in chill accumulation negligible in Beijing’s cold-winter climate. It does not seem likely that reductions in chill will have a major effect on the studied species in Beijing in the near future. Such problems are much more likely for trees grown in locations that are substantially warmer than their native habitats, such as temperate species in the subtropics and tropics.     

Carotenoid composition and down regulation of photosystem II in three conifer species during the winter

Seedlings and coppice shoots of Betula pubescens Ehrh. were grown under controlled conditions designed to simulate the annual growth cycle, and a water stress was introduced during the short day (SD). Alleviation of hud dormancy after increasing periods at chilling temperatures was tested under long day (LD) conditions. Abscisic acid (ABA) was analysed in leaf and bud samples by gas chromatography-mass spectrometry using [²H₄]ABA as the internal standard. Elongation growth of coppice shoots was faster than that of seedlings under both LD and SD conditions, while the final growth cessation occurred in a similar manner and was not affected by water stress, which significantly reduced growth rate in both plant types. Bud dormancy gradually decreased with increasing length of chilling, starting from the basal parts of the plant axis. Water stress did not retard hudhurst. but rather improved it in the chilled coppice shoots and in the non-chilled and partially chilled seedlings. Water content of buds was higher in coppice shoots than in seedlings, but after exposure to SD. it gradually decreased to 45% in both plant types and was not affected by water stress or chilling. The ABA level in both leaves and buds increased during SD treatment and was" enhanced by water stress. No clear differences in bud ABA level were found between the seedlings and coppice shoots under SD conditions, although coppice shoots had less ABA during the preceding LD conditions. There was, in general, no clear effect of chilling on bud ABA level. Budbursl in chilled, single-node cuttings was inhibited by external ABA treatment, which raised the internal ABA levels 10 to 150 times above normal. The observed correlation between ABA level and water content in buds during induction of dormancy under SD and water stress conditions indicates a possible role for ABA in the regulation of dormancy.     

Detecting nonlinear response of spring phenology to climate change by Bayesian analysis

The impact of climate change on the advancement of plant phenological events has been heavily studied in the last decade. Although the majority of spring plant phenological events have been trending earlier, this is not universally true. Recent work has suggested that species that are not advancing in their spring phenological behavior are responding more to lack of winter chill than increased spring heat. One way to test this hypothesis is by evaluating the behavior of a species known to have a moderate to high chilling requirement and examining how it is responding to increased warming. This study used a 60‐year data set for timing of leaf‐out and male flowering of walnut (Juglans regia) cultivar ‘Payne’ to examine this issue. The spring phenological behavior of ‘Payne’ walnut differed depending on bud type. The vegetative buds, which have a higher chilling requirement, trended toward earlier leaf‐out until about 1994, when they shifted to later leaf‐out. The date of male bud pollen shedding advanced over the course of the whole record. Our findings suggest that many species which have exhibited earlier bud break are responding to warmer spring temperatures, but may shift into responding more to winter temperatures (lack of adequate chilling) as warming continues.